Auswertung TC Daten

results_comp <- c()
length_comp <- c()
results_comp_cc <- c()
length_comp_cc <- c()
results_comp_bp <- c()
length_comp_bp <- c()
results_comp_bp <- c()
name_comp <- c()
name_comp_cc <- c()
name_comp_bp <- c()

1 Load Libraries & Plot function & Colors

library(ggplot2)
library(tidyverse)
library(dplyr)
library(UpSetR)
library(pheatmap)
library(ggvenn)
library(knitr)
library(reshape2)
library(eulerr)
library(UniprotR)
library(stringr)
#library(venneuler)
#library(VennDiagram) 

# Function to extract and remove square brackets from a string
extract_goterm <- function(input_string) {
  # Extract the first string between square brackets
  extracted_string <- str_extract(input_string, "\\[(.*?)\\]")
  
  # Remove the square brackets
  extracted_string <- str_remove_all(extracted_string, "\\[|\\]")
  
  # Return the extracted string
  return(extracted_string)
}

2 Überblick

• für die ausgewählten Grafiken des Papers wurden die Proteine (und zwar nur das erste einer Proteingruppe) mittels des Packages UniprotR einer molekularen, biologischen Funktion bzw einem zellulärem Compartment zugeordnet
• UniprotR
• Ablauf: einlesen der Daten und extrahieren der Accesion Number und mittels Funktion GetProteinGOInfo die Daten vom UniProt Server gelesen
• diese GO Terms dann je Extraktion zb E4_D1_pool und absteigender Frequenz sortiert und die besten 20 geplottet wobei dabei nicht zuordenbare Accessionnumbers ignoriert wurden (bei ein paar habe ich es mir angeschaut und es sind so 10-20% die nicht zuordenbar sind)
• zuerst von allen functionen die besten 20 auswählen
• die werden dann gemerged
• dann eben geschaut wieviel NA im Vergleich in Probe A (spalte 2) sind; das sind dann die proteine die mehr in Probe B sind; wenn man dann schaut wieviele in Summe gefunden wurden kriegt man die %

results_comp <- c(results_comp,sum(is.na(BP[2]))) rength_comp <- c(length_comp, length(BP[,1]))

• Zusatzinfo GO Terms Uniprot
• Zusatzinfo Panther DB

2.1 Erklärung Judith

WIE KOMME ICH AUF DIE MOLEKULAREN FUNKTIONEN DIE WIR MEHR ODER WENIGER FINDEN?

Ich habe zb zwei Proben X und Y. Bei beiden ordne ich die molekularen Funktionen über die FASTA identifier zu. Das geht indem man automatisch auf Uniprot zugreift und es gibt dafür ein Package in R.

Ich sortiere dann die molekularen Funktionen nach Häufigkeit - es kann ja sein, dass mehrere Proteine der Gruppe Oxidoreductase Aktivität haben - und zwar für X und Y. Dann merge ich die beiden und das Ergebnis sieht so aus…

In Spalte Var1 steht eben die molecular function. In Spalte Freq.X bzw Freq.Y wie oft diese Molecular Function vorgekommen ist.

Wie komme ich jetzt auf die neuen Molecular Functions die ich in Y mehr finde als in X? Ich schaue einfach in der Spalte Freq.X wie oft durch NA steht weil diese Funktion eben nur in Y vorkommt. Da kommt dann in diesem Beispiel 3 NA values. Wenn in Summe 19 Zeilen sind, dann habe ich 3/19=15,8% neue molekulare Funktionen in Y.

2.2 am 13.07 geprüft

• Grafik2A: v13 paper - das stimmt “In the two-dimensional extraction approach 31 % new molecular functional terms could be assigned to proteins of second extractions dimension (Fig. 4A – suppl. material).”

• Grafik2B: In the three-dimensional approach 39 % additional molecular functional terms could be achieved using carbonate buffer (dimension 1b) and extended to further 24 % in the final dimension (urea plus Triton-X) (Fig. 4B – suppl. material),

  • das stimmt so nicht: in 1 5NA die auch in 1b vorkommen; also 5/33=15%
  • habe ich im Code mit dem sum(is.na(BP$Freq.x) & !is.na(BP$Freq.y)) korrigiert

• Grafik2C: v13 paper - das stimmt “The difference in the assignment of identified proteins to molecular functions between the total two- respectively three-dimensional approach was only 13 % (Fig. 4C – suppl. Material),”

• Grafik 3A: v13 paper while the comparison of fractionation approaches resulted in a plus of xx % for the GeLC-MS/MS approach versus the SEC-HPLC-method (Fig. 4D – suppl. Material)

3 Grafik 1

• fehlt weil ja uninteressant für diesen Vergleich

4 Grafik 2

4.1 A

#D1_uni <- GetProteinGOInfo(D1)
#saveRDS(D1_uni,"./go_terms/graph2_D1_uni.RDS")
GO_1 <- readRDS("./go_terms/graph2_D1_uni.RDS")
#D2_uni <- G1 <- t_BP_sorted[c(1:20),]etProteinGOInfo(D2)
#saveRDS(D2_uni,"./go_terms/graph2_D2_uni.RDS")
GO_2 <- readRDS("./go_terms/graph2_D2_uni.RDS")

################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
#t_BP_sorted_1 <- t_BP_sorted[c(1:20),]
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
#t_BP_sorted_2 <- t_BP_sorted[c(1:20),]
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..molecular.function.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp <- c(results_comp, tmp/(length(BP[,1])))
name_comp <- c(name_comp,"graph2A-D1+D2","graph2A-onlyD1","graph2A-onlyD2")

colnames(BP) <- c("Function", "D1: Phosphate buffer", "D2: Phosphate buffer with urea-triton X")
kable(BP)

Function	D1: Phosphate buffer	D2: Phosphate buffer with urea-triton X
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	NA
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	NA
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	NA
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	NA
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	NA
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	NA
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	NA
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	1	NA
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	1	NA
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	NA
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	NA
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	NA
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	NA
actin binding [GO:0003779]	2	1
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	NA
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	NA
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	5	3
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	1	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	2
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin monomer binding [GO:0003785]	2	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	1	1
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	1
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	NA
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	1	NA
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	1	2
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	1	NA
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	NA
alkaline phosphatase activity [GO:0004035]	1	NA
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	1	NA
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
alpha-L-fucosidase activity [GO:0004560]	2	1
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	NA
aminoacylase activity [GO:0004046]	2	1
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	NA
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	NA
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	NA
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	NA
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
arylformamidase activity [GO:0004061]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	NA
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	4
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	1	2
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	1	1
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	NA
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	NA
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	NA
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	NA
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	NA
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	NA
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	2	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	1	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	NA
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	NA
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	NA
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	1	NA
beta-glucosidase activity [GO:0008422]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	NA
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	1	NA
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
calcium ion binding [GO:0005509]	8	6
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	3
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	1	1
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	1
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	1	NA
carbohydrate binding [GO:0030246]	2	1
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	NA
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	NA
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	NA
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	NA
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
cell adhesion molecule binding [GO:0050839]	2	2
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	NA
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	NA
chitin binding [GO:0008061]	3	2
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	NA
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	1	4
chloride channel activity [GO:0005254]	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	1	NA
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	1	2
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	NA
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	1	NA
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	2	NA
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	1	NA
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	NA
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	1
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	NA
cysteine-type endopeptidase activity [GO:0004197]	5	3
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
deaminase activity [GO:0019239]	1	NA
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	1	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	NA
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	1	NA
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA
dioxygenase activity [GO:0051213]	1	NA
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	1
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	2
dynein complex binding [GO:0070840]	1	NA
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	NA
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme regulator activity [GO:0030234]	2	2
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	NA
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	NA
FFAT motif binding [GO:0033149]	1	1
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	NA
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	NA
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	NA
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	NA
glutathione transferase activity [GO:0004364]	5	5
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	NA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	1	NA
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	1	1
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosyltransferase activity [GO:0016757]	1	1
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	NA
GTP binding [GO:0005525]	1	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	3	6
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	3	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	NA
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	NA
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	NA
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	2	13
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	NA
histone binding [GO:0042393]	1	NA
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	NA
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	1	NA
Hsp90 protein binding [GO:0051879]	1	NA
hydro-lyase activity [GO:0016836]	1	NA
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	NA
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	6	4
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	NA
hydrolase activity, acting on glycosyl bonds [GO:0016798]	1	1
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	NA
hydroxypyruvate isomerase activity [GO:0008903]	1	NA
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	NA
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	1	NA
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-malate dehydrogenase activity [GO:0030060]	2	2
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	NA
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]	1	NA
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	2	1
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	NA
lipid transporter activity [GO:0005319]	2	3
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	NA
lysozyme activity [GO:0003796]	1	NA
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	NA
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	2	2
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	NA
metal ion binding [GO:0046872]	2	4
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	3	1
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	1	NA
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	1	1
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	1	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	NA
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	1	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	NA
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	2	1
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	NA
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	2	1
metallodipeptidase activity [GO:0070573]	1	NA
metallopeptidase activity [GO:0008237]	1	NA
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	NA
microtubule binding [GO:0008017]	1	1
microtubule plus-end binding [GO:0051010]	1	NA
mRNA binding [GO:0003729]	1	1
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	NA
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	2	2
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	NA
N-acetyltransferase activity [GO:0008080]	1	NA
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
nucleic acid binding [GO:0003676]	1	1
nucleotide binding [GO:0000166]	2	1
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
odorant binding [GO:0005549]	3	2
omega-amidase activity [GO:0050152]	1	NA
oxidoreductase activity [GO:0016491]	5	3
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	1	NA
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	3	1
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	1	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	NA
peroxiredoxin activity [GO:0051920]	2	2
phosphatidylinositol bisphosphate binding [GO:1902936]	3	2
phosphoserine residue binding [GO:0050815]	1	1
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA
protein-arginine N-methyltransferase activity [GO:0016274]	1	NA
protein-disulfide reductase activity [GO:0015035]	1	NA
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA
protein disulfide isomerase activity [GO:0003756]	2	3
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	NA
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	NA
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein phosphatase regulator activity [GO:0019888]	1	1
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	3	5
proton transmembrane transporter activity [GO:0015078]	3	3
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	NA
pyridoxal phosphate binding [GO:0030170]	1	NA
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	NA
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	1
RNA binding [GO:0003723]	4	1
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	16	16
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	1	NA
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	1
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	2	3
S-formylglutathione hydrolase activity [GO:0018738]	1	NA
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
selenium binding [GO:0008430]	1	1
serine-type carboxypeptidase activity [GO:0004185]	1	NA
serine-type endopeptidase activity [GO:0004252]	8	3
serine-type endopeptidase inhibitor activity [GO:0004867]	1	2
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	NA
snoRNA binding [GO:0030515]	1	1
spermine synthase activity [GO:0016768]	1	NA
sterol binding [GO:0032934]	1	NA
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	3	13
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	24	20
structural molecule activity [GO:0005198]	5	3
thioredoxin peroxidase activity [GO:0008379]	1	NA
translation elongation factor activity [GO:0003746]	2	1
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
ubiquitin binding [GO:0043130]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	NA
UDP-glycosyltransferase activity [GO:0008194]	1	3
unfolded protein binding [GO:0051082]	2	1
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	NA	1
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	NA	1
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	NA	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	NA	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	NA	1
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	NA	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	NA	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	NA	1
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	NA	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	NA	2
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]	NA	1
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	NA	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	NA	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	NA	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	NA	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	NA	3
alpha,alpha-trehalase activity [GO:0004555]	NA	1
amyloid-beta binding [GO:0001540]	NA	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	NA	2
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]	NA	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	NA	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	NA	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	NA	1
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	NA	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	NA	1
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	NA	1
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	NA	1
ATPase activator activity [GO:0001671]	NA	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	NA	1
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]	NA	1
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	NA	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	NA	1
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	NA	1
carnitine O-palmitoyltransferase activity [GO:0004095]	NA	1
cell-cell adhesion mediator activity [GO:0098632]	NA	1
citrate secondary active transmembrane transporter activity [GO:0071913]	NA	1
cysteine-type peptidase activity [GO:0008234]	NA	1
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	NA	1
DNA binding [GO:0003677]; metal ion binding [GO:0046872]	NA	1
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	NA	1
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	NA	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	NA	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	NA	1
gap junction channel activity [GO:0005243]	NA	1
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1
glucuronosyltransferase activity [GO:0015020]	NA	3
glutaminyl-peptide cyclotransferase activity [GO:0016603]	NA	1
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	NA	1
GPI anchor binding [GO:0034235]	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	NA	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	NA	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	NA	1
hydrolase activity, acting on ester bonds [GO:0016788]	NA	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	NA	1
inorganic phosphate transmembrane transporter activity [GO:0005315]	NA	1
integrin binding [GO:0005178]	NA	2
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	NA	1
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	NA	1
mannose binding [GO:0005537]	NA	1
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	NA	1
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	NA	1
metalloexopeptidase activity [GO:0008235]	NA	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	NA	1
monooxygenase activity [GO:0004497]	NA	1
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	NA	1
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	NA	1
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]	NA	1
neuropeptide Y receptor activity [GO:0004983]	NA	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	NA	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	NA	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	NA	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	NA	1
peptidase activity [GO:0008233]	NA	2
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]	NA	1
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	NA	1
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]	NA	1
potassium:chloride symporter activity [GO:0015379]	NA	1
protein-containing complex binding [GO:0044877]	NA	1
protein kinase regulator activity [GO:0019887]	NA	1
protein serine/threonine kinase activator activity [GO:0043539]	NA	1
protein transmembrane transporter activity [GO:0008320]	NA	1
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	NA	1
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	NA	1
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	NA	1
scavenger receptor activity [GO:0005044]	NA	1
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	NA	2
signaling receptor binding [GO:0005102]	NA	1
signaling receptor complex adaptor activity [GO:0030159]	NA	1
small GTPase binding [GO:0031267]	NA	1
structural constituent of cuticle [GO:0042302]	NA	8
sulfotransferase activity [GO:0008146]	NA	1
sulfuric ester hydrolase activity [GO:0008484]	NA	1
transmembrane transporter activity [GO:0022857]	NA	1
tropomyosin binding [GO:0005523]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]
alkaline phosphatase activity [GO:0004035]
alpha-galactosidase activity [GO:0004557]
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]
arylformamidase activity [GO:0004061]
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]
beta-glucosidase activity [GO:0008422]
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]
chloride channel activity [GO:0005254]
chromatin binding [GO:0003682]; histone binding [GO:0042393]
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]
deaminase activity [GO:0019239]
dihydropyrimidinase activity [GO:0004157]
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
dioxygenase activity [GO:0051213]
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
dynein complex binding [GO:0070840]
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]
estradiol 17-beta-dehydrogenase activity [GO:0004303]
fatty-acyl-CoA binding [GO:0000062]
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]
glutathione disulfide oxidoreductase activity [GO:0015038]
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]
histone binding [GO:0042393]
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]
Hsp90 protein binding [GO:0051879]
hydro-lyase activity [GO:0016836]
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]
hydroxypyruvate isomerase activity [GO:0008903]
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]
ligase activity [GO:0016874]
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]
lysozyme activity [GO:0003796]
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]
metallodipeptidase activity [GO:0070573]
metallopeptidase activity [GO:0008237]
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]
microtubule plus-end binding [GO:0051010]
mRNA binding [GO:0003729]; RNA binding [GO:0003723]
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]
N-acetyltransferase activity [GO:0008080]
omega-amidase activity [GO:0050152]
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]
palmitoyl-(protein) hydrolase activity [GO:0008474]
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-arginine N-methyltransferase activity [GO:0016274]
protein-disulfide reductase activity [GO:0015035]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
pyridoxal phosphate binding [GO:0030170]
Rho GDP-dissociation inhibitor activity [GO:0005094]
ribose-5-phosphate isomerase activity [GO:0004751]
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]
S-formylglutathione hydrolase activity [GO:0018738]
serine-type carboxypeptidase activity [GO:0004185]
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]
spermine synthase activity [GO:0016768]
sterol binding [GO:0032934]
thioredoxin peroxidase activity [GO:0008379]
ubiquitin binding [GO:0043130]
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]

kable(BP[is.na(BP[,2])==TRUE,1])

x
2-hydroxyglutarate dehydrogenase activity [GO:0047545]
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]
alpha,alpha-trehalase activity [GO:0004555]
amyloid-beta binding [GO:0001540]
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]
ATPase activator activity [GO:0001671]
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]
carnitine O-palmitoyltransferase activity [GO:0004095]
cell-cell adhesion mediator activity [GO:0098632]
citrate secondary active transmembrane transporter activity [GO:0071913]
cysteine-type peptidase activity [GO:0008234]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA binding [GO:0003677]; metal ion binding [GO:0046872]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
gap junction channel activity [GO:0005243]
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
glucuronosyltransferase activity [GO:0015020]
glutaminyl-peptide cyclotransferase activity [GO:0016603]
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]
GPI anchor binding [GO:0034235]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]
hydrolase activity, acting on ester bonds [GO:0016788]
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]
inorganic phosphate transmembrane transporter activity [GO:0005315]
integrin binding [GO:0005178]
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
mannose binding [GO:0005537]
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]
metalloexopeptidase activity [GO:0008235]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
monooxygenase activity [GO:0004497]
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]
neuropeptide Y receptor activity [GO:0004983]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]
peptidase activity [GO:0008233]
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]
potassium:chloride symporter activity [GO:0015379]
protein-containing complex binding [GO:0044877]
protein kinase regulator activity [GO:0019887]
protein serine/threonine kinase activator activity [GO:0043539]
protein transmembrane transporter activity [GO:0008320]
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]
scavenger receptor activity [GO:0005044]
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]
signaling receptor binding [GO:0005102]
signaling receptor complex adaptor activity [GO:0030159]
small GTPase binding [GO:0031267]
structural constituent of cuticle [GO:0042302]
sulfotransferase activity [GO:0008146]
sulfuric ester hydrolase activity [GO:0008484]
transmembrane transporter activity [GO:0022857]
tropomyosin binding [GO:0005523]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
colnames(BP) <- c("Function", "D1","D2")
kable(BP)

Function	D1	D2
6-phosphofructokinase complex [GO:0005945]	1	1
actin cytoskeleton [GO:0015629]; cytoplasm [GO:0005737]	1	1
actin filament [GO:0005884]	2	1
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]	1	NA
adherens junction [GO:0005912]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]	1	NA
Arp2/3 protein complex [GO:0005885]	1	NA
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]	1	1
basement membrane [GO:0005604]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	1
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]	1	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]	1	1
cAMP-dependent protein kinase complex [GO:0005952]	1	NA
cell-cell junction [GO:0005911]; plasma membrane [GO:0005886]	1	1
cell cortex [GO:0005938]; clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]; clathrin-coated endocytic vesicle [GO:0045334]	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]	1	1
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]	1	NA
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]	1	NA
cell projection [GO:0042995]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
chaperonin-containing T-complex [GO:0005832]	4	4
chitin-based extracellular matrix [GO:0062129]	3	13
chromatin [GO:0000785]; nucleus [GO:0005634]	1	NA
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]	1	1
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]	1	NA
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	1	1
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]	2	3
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]	2	NA
cortical actin cytoskeleton [GO:0030864]	1	NA
cytoplasm [GO:0005737]	59	27
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]	1	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; myosin complex [GO:0016459]; sarcomere [GO:0030017]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]	1	NA
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]	1	1
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]	1	1
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	NA
cytoplasm [GO:0005737]; intracellular membrane-bounded organelle [GO:0043231]	1	1
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]	1	NA
cytoplasm [GO:0005737]; lysosome [GO:0005764]	1	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]	1	2
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]	1	1
cytoplasm [GO:0005737]; microtubule [GO:0005874]	2	2
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]	4	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytoplasm [GO:0005737]; myosin II complex [GO:0016460]	1	1
cytoplasm [GO:0005737]; nascent polypeptide-associated complex [GO:0005854]	1	1
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]	5	5
cytoplasm [GO:0005737]; nucleus [GO:0005634]; polysome [GO:0005844]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	3	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	2	1
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]	1	NA
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]	3	3
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]	1	1
cytoplasm [GO:0005737]; ribose phosphate diphosphokinase complex [GO:0002189]	1	1
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]	1	NA
cytoskeleton [GO:0005856]; cytosol [GO:0005829]	1	NA
cytoskeleton [GO:0005856]; membrane [GO:0016020]	1	NA
cytosol [GO:0005829]	27	16
cytosol [GO:0005829]; cytosolic small ribosomal subunit [GO:0022627]	1	1
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]	1	1
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]	1	NA
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]	4	2
cytosol [GO:0005829]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]	3	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; ribosome [GO:0005840]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; RISC complex [GO:0016442]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	1
cytosol [GO:0005829]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; protein-containing complex [GO:0032991]	1	1
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]	1	1
cytosolic large ribosomal subunit [GO:0022625]	24	24
cytosolic large ribosomal subunit [GO:0022625]; large ribosomal subunit [GO:0015934]	1	1
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]	1	1
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	1	NA
cytosolic small ribosomal subunit [GO:0022627]	10	10
cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]	1	NA
cytosolic small ribosomal subunit [GO:0022627]; small-subunit processome [GO:0032040]	1	1
cytosolic small ribosomal subunit [GO:0022627]; small ribosomal subunit [GO:0015935]	2	2
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]	1	NA
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]	1	1
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	1
elongin complex [GO:0070449]	1	NA
endomembrane system [GO:0012505]	1	1
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum lumen [GO:0005788]	2	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]	1	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]	1	NA
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	1	5
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]	1	1
endoplasmic reticulum chaperone complex [GO:0034663]	1	1
endoplasmic reticulum lumen [GO:0005788]	3	NA
endoplasmic reticulum lumen [GO:0005788]; endoplasmic reticulum membrane [GO:0005789]	1	1
endoplasmic reticulum membrane [GO:0005789]	2	9
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]	1	1
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	1	NA
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]	1	2
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]	4	2
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]	1	NA
eukaryotic translation elongation factor 1 complex [GO:0005853]	1	NA
external side of plasma membrane [GO:0009897]	1	NA
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]	1	1
extracellular region [GO:0005576]	9	11
extracellular space [GO:0005615]	9	8
extracellular space [GO:0005615]; lysosome [GO:0005764]	8	3
extracellular space [GO:0005615]; membrane [GO:0016020]	1	1
extracellular space [GO:0005615]; plasma membrane [GO:0005886]	1	NA
glutamate-cysteine ligase complex [GO:0017109]	1	NA
glycerol-3-phosphate dehydrogenase complex [GO:0009331]	2	2
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1
GMP reductase complex [GO:1902560]	1	NA
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	1	1
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]	1	1
intracellular membrane-bounded organelle [GO:0043231]	2	1
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]	1	1
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]	1	1
intracellular non-membrane-bounded organelle [GO:0043232]	1	1
intracellular organelle [GO:0043229]	3	2
lipid droplet [GO:0005811]; membrane [GO:0016020]	1	2
lysosome [GO:0005764]	2	1
lysosome [GO:0005764]; membrane [GO:0016020]	1	NA
mediator complex [GO:0016592]; mitochondrion [GO:0005739]	1	NA
membrane [GO:0016020]	8	40
membrane [GO:0016020]; mitochondrion [GO:0005739]	2	5
membrane [GO:0016020]; peroxisome [GO:0005777]	2	2
membrane [GO:0016020]; plasma membrane [GO:0005886]	2	3
membrane [GO:0016020]; sarcoplasmic reticulum membrane [GO:0033017]	1	1
membrane [GO:0016020]; spectrin [GO:0008091]	1	1
membrane [GO:0016020]; synapse [GO:0045202]	1	NA
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]	1	NA
mitochondrial fatty acid beta-oxidation multienzyme complex [GO:0016507]	1	1
mitochondrial inner membrane [GO:0005743]	2	8
mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	NA
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]	1	1
mitochondrial intermembrane space [GO:0005758]; respirasome [GO:0070469]	1	1
mitochondrial large ribosomal subunit [GO:0005762]	1	NA
mitochondrial matrix [GO:0005759]	6	3
mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]	1	1
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]	1	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	1	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	1	1
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]	2	2
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	1	2
mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase, stator stalk [GO:0000274]	1	1
mitochondrial pyruvate dehydrogenase complex [GO:0005967]	1	1
mitochondrial respiratory chain complex I [GO:0005747]	3	12
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) [GO:0005749]	1	1
mitochondrial respiratory chain complex III [GO:0005750]	3	4
mitochondrial respiratory chain complex IV [GO:0005751]	2	5
mitochondrial ribonuclease P complex [GO:0030678]	1	1
mitochondrial small ribosomal subunit [GO:0005763]	1	NA
mitochondrion [GO:0005739]	30	22
mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]	3	3
mitochondrion [GO:0005739]; peroxisome [GO:0005777]	3	2
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]	1	1
mitochondrion [GO:0005739]; succinate-CoA ligase complex [GO:0042709]	2	1
mitochondrion [GO:0005739]; tricarboxylic acid cycle enzyme complex [GO:0045239]	1	1
myosin filament [GO:0032982]; myosin II complex [GO:0016460]; sarcomere [GO:0030017]	1	1
nuclear speck [GO:0016607]	1	NA
nucleosome [GO:0000786]; nucleus [GO:0005634]	3	2
nucleus [GO:0005634]	7	3
nucleus [GO:0005634]; P granule [GO:0043186]	1	1
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	1	NA
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]	3	2
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]	1	NA
nucleus [GO:0005634]; site of double-strand break [GO:0035861]	1	NA
nucleus [GO:0005634]; Z disc [GO:0030018]	1	1
oligosaccharyltransferase complex [GO:0008250]	3	4
P granule [GO:0043186]	1	1
peroxisome [GO:0005777]	9	2
phenylalanine-tRNA ligase complex [GO:0009328]	1	NA
phosphopyruvate hydratase complex [GO:0000015]	1	1
plasma membrane [GO:0005886]	4	6
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	1	NA
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]	1	NA
proteasome regulatory particle [GO:0005838]	1	1
proteasome regulatory particle, lid subcomplex [GO:0008541]	3	1
proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178]	1	1
proton-transporting V-type ATPase, V1 domain [GO:0033180]	1	1
ribonucleoprotein complex [GO:1990904]	2	1
ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	4	5
translation release factor complex [GO:0018444]	1	1
troponin complex [GO:0005861]	4	4
vacuolar proton-transporting V-type ATPase, V1 domain [GO:0000221]	3	3
9+2 motile cilium [GO:0097729]; axonemal dynein complex [GO:0005858]; microtubule [GO:0005874]	NA	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]	NA	1
AP-2 adaptor complex [GO:0030122]	NA	1
axon [GO:0030424]; plasma membrane [GO:0005886]	NA	1
basement membrane [GO:0005604]	NA	2
basement membrane [GO:0005604]; membrane [GO:0016020]	NA	1
box H/ACA snoRNP complex [GO:0031429]	NA	1
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	NA	2
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]	NA	1
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]	NA	1
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]	NA	1
collagen-containing extracellular matrix [GO:0062023]	NA	1
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]	NA	2
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	NA	1
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]	NA	1
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	NA	1
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]	NA	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]	NA	1
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]	NA	1
cytoplasm [GO:0005737]; myosin complex [GO:0016459]	NA	1
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]	NA	1
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	NA	1
cytoplasm [GO:0005737]; SAM complex [GO:0001401]	NA	1
cytoplasmic side of endoplasmic reticulum membrane [GO:0098554]; lumenal side of endoplasmic reticulum membrane [GO:0098553]	NA	1
cytoskeleton [GO:0005856]	NA	1
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]	NA	1
cytosol [GO:0005829]; nuclear envelope [GO:0005635]	NA	1
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]	NA	1
dendrite [GO:0030425]	NA	1
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]	NA	2
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]	NA	1
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]	NA	1
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]	NA	1
endomembrane system [GO:0012505]; membrane [GO:0016020]	NA	1
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	NA	2
endoplasmic reticulum [GO:0005783]; peroxisome [GO:0005777]	NA	1
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	NA	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]	NA	1
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]	NA	1
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]	NA	1
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]	NA	1
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]	NA	1
extracellular matrix [GO:0031012]	NA	8
gap junction [GO:0005921]; plasma membrane [GO:0005886]	NA	1
Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	NA	1
Golgi stack [GO:0005795]	NA	1
heterotrimeric G-protein complex [GO:0005834]	NA	2
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]	NA	3
intracellular organelle [GO:0043229]; plasma membrane [GO:0005886]	NA	1
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]	NA	1
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]	NA	1
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	NA	1
membrane [GO:0016020]; SAM complex [GO:0001401]	NA	1
membrane [GO:0016020]; Sec61 translocon complex [GO:0005784]	NA	1
MICOS complex [GO:0061617]	NA	2
microtubule [GO:0005874]	NA	1
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]	NA	1
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]	NA	1
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]	NA	1
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]	NA	1
mitochondrial membrane [GO:0031966]	NA	1
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]	NA	1
mitochondrial outer membrane translocase complex [GO:0005742]	NA	1
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]	NA	1
neuron projection [GO:0043005]	NA	1
peroxisomal membrane [GO:0005778]	NA	1
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]	NA	1
proton-transporting V-type ATPase complex [GO:0033176]	NA	1
sarcoplasmic reticulum membrane [GO:0033017]	NA	1
Sec61 translocon complex [GO:0005784]	NA	1
signal peptidase complex [GO:0005787]	NA	1
signal recognition particle receptor complex [GO:0005785]	NA	1
sodium:potassium-exchanging ATPase complex [GO:0005890]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]
Arp2/3 protein complex [GO:0005885]
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]
cAMP-dependent protein kinase complex [GO:0005952]
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]
chromatin [GO:0000785]; nucleus [GO:0005634]
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]
cortical actin cytoskeleton [GO:0030864]
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]
cytoplasm [GO:0005737]; lysosome [GO:0005764]
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]
cytoskeleton [GO:0005856]; cytosol [GO:0005829]
cytoskeleton [GO:0005856]; membrane [GO:0016020]
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]
cytosol [GO:0005829]; nucleus [GO:0005634]
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]
elongin complex [GO:0070449]
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]
endoplasmic reticulum lumen [GO:0005788]
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]
eukaryotic translation elongation factor 1 complex [GO:0005853]
external side of plasma membrane [GO:0009897]
extracellular space [GO:0005615]; plasma membrane [GO:0005886]
glutamate-cysteine ligase complex [GO:0017109]
GMP reductase complex [GO:1902560]
lysosome [GO:0005764]; membrane [GO:0016020]
mediator complex [GO:0016592]; mitochondrion [GO:0005739]
membrane [GO:0016020]; synapse [GO:0045202]
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]
mitochondrial large ribosomal subunit [GO:0005762]
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]
mitochondrial small ribosomal subunit [GO:0005763]
nuclear speck [GO:0016607]
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]
nucleus [GO:0005634]; site of double-strand break [GO:0035861]
phenylalanine-tRNA ligase complex [GO:0009328]
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]

kable(BP[is.na(BP[,2])==TRUE,1])

x
9+2 motile cilium [GO:0097729]; axonemal dynein complex [GO:0005858]; microtubule [GO:0005874]
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]
AP-2 adaptor complex [GO:0030122]
axon [GO:0030424]; plasma membrane [GO:0005886]
basement membrane [GO:0005604]
basement membrane [GO:0005604]; membrane [GO:0016020]
box H/ACA snoRNP complex [GO:0031429]
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]
collagen-containing extracellular matrix [GO:0062023]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]
cytoplasm [GO:0005737]; myosin complex [GO:0016459]
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; SAM complex [GO:0001401]
cytoplasmic side of endoplasmic reticulum membrane [GO:0098554]; lumenal side of endoplasmic reticulum membrane [GO:0098553]
cytoskeleton [GO:0005856]
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]
cytosol [GO:0005829]; nuclear envelope [GO:0005635]
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]
dendrite [GO:0030425]
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]
endomembrane system [GO:0012505]; membrane [GO:0016020]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
endoplasmic reticulum [GO:0005783]; peroxisome [GO:0005777]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]
extracellular matrix [GO:0031012]
gap junction [GO:0005921]; plasma membrane [GO:0005886]
Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
Golgi stack [GO:0005795]
heterotrimeric G-protein complex [GO:0005834]
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]
intracellular organelle [GO:0043229]; plasma membrane [GO:0005886]
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
membrane [GO:0016020]; SAM complex [GO:0001401]
membrane [GO:0016020]; Sec61 translocon complex [GO:0005784]
MICOS complex [GO:0061617]
microtubule [GO:0005874]
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]
mitochondrial membrane [GO:0031966]
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]
mitochondrial outer membrane translocase complex [GO:0005742]
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]
neuron projection [GO:0043005]
peroxisomal membrane [GO:0005778]
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]
proton-transporting V-type ATPase complex [GO:0033176]
sarcoplasmic reticulum membrane [GO:0033017]
Sec61 translocon complex [GO:0005784]
signal peptidase complex [GO:0005787]
signal recognition particle receptor complex [GO:0005785]
sodium:potassium-exchanging ATPase complex [GO:0005890]

tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_cc <- c(results_comp_cc, tmp/(length(BP[,1])))
name_comp_cc <- c(name_comp_cc, "graph2A-D1+D2","graph2A-onlyD1","graph2A-onlyD2")

################################# biological process
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..biological.process.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..biological.process.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
colnames(BP) <- c("Function", "D1","D2")
kable(BP)

Function	D1	D2
‘de novo’ AMP biosynthetic process [GO:0044208]; ‘de novo’ IMP biosynthetic process [GO:0006189]	1	NA
‘de novo’ AMP biosynthetic process [GO:0044208]; IMP metabolic process [GO:0046040]	1	NA
‘de novo’ IMP biosynthetic process [GO:0006189]; adenine biosynthetic process [GO:0046084]; purine nucleotide biosynthetic process [GO:0006164]	1	1
‘de novo’ IMP biosynthetic process [GO:0006189]; glutamine metabolic process [GO:0006541]	1	1
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; beta-alanine biosynthetic process [GO:0019483]; thymine catabolic process [GO:0006210]; uracil catabolic process [GO:0006212]	1	NA
2-oxoglutarate metabolic process [GO:0006103]	1	NA
3’-phosphoadenosine 5’-phosphosulfate biosynthetic process [GO:0050428]; sulfate assimilation [GO:0000103]	1	NA
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; phosphorylation [GO:0016310]; purine nucleotide biosynthetic process [GO:0006164]; ribonucleoside monophosphate biosynthetic process [GO:0009156]	1	1
acetate metabolic process [GO:0006083]	1	1
acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA biosynthetic process from acetate [GO:0019427]; bioluminescence [GO:0008218]	1	1
acetyl-CoA biosynthetic process [GO:0006085]; citrate metabolic process [GO:0006101]; fatty acid biosynthetic process [GO:0006633]; tricarboxylic acid cycle [GO:0006099]	1	1
acetyl-CoA biosynthetic process from pyruvate [GO:0006086]	2	2
actin cytoskeleton organization [GO:0030036]	2	2
actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]	1	2
actin filament bundle assembly [GO:0051017]	1	1
actin filament capping [GO:0051693]	1	1
actin filament depolymerization [GO:0030042]; locomotion [GO:0040011]; positive regulation of actin filament depolymerization [GO:0030836]; sarcomere organization [GO:0045214]	1	NA
actin filament organization [GO:0007015]	2	NA
actin filament organization [GO:0007015]; animal organ morphogenesis [GO:0009887]; cell adhesion [GO:0007155]; clathrin coat assembly [GO:0048268]; endocytosis [GO:0006897]; neuron differentiation [GO:0030182]	1	1
actin filament organization [GO:0007015]; muscle contraction [GO:0006936]	2	1
actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; lysosomal transport [GO:0007041]	1	1
activation of GTPase activity [GO:0090630]; nucleocytoplasmic transport [GO:0006913]; signal transduction [GO:0007165]	1	NA
actomyosin structure organization [GO:0031032]	1	1
actomyosin structure organization [GO:0031032]; animal organ morphogenesis [GO:0009887]; neuron differentiation [GO:0030182]	1	1
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; ATP metabolic process [GO:0046034]; phosphorylation [GO:0016310]	1	NA
alanyl-tRNA aminoacylation [GO:0006419]; tRNA modification [GO:0006400]	1	NA
amino acid catabolic process [GO:0009063]; carbohydrate catabolic process [GO:0016052]	1	1
amino acid metabolic process [GO:0006520]	2	1
amino acid metabolic process [GO:0006520]; biosynthetic process [GO:0009058]	1	1
ammonia assimilation cycle [GO:0019676]; glutamate biosynthetic process [GO:0006537]; L-glutamate biosynthetic process [GO:0097054]	1	NA
anatomical structure morphogenesis [GO:0009653]; animal organ development [GO:0048513]; cell differentiation [GO:0030154]; cellular component organization [GO:0016043]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; cell-cell adhesion [GO:0098609]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; protein phosphorylation [GO:0006468]	2	2
androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]	1	NA
anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; axon guidance [GO:0007411]; cytoskeleton-dependent intracellular transport [GO:0030705]; microtubule-based movement [GO:0007018]; synaptic vesicle transport [GO:0048489]	1	NA
apoptotic mitochondrial changes [GO:0008637]; mitochondrial unfolded protein response [GO:0034514]; protein folding [GO:0006457]; protein import into mitochondrial intermembrane space [GO:0045041]; protein refolding [GO:0042026]	1	1
arginine catabolic process to glutamate [GO:0019544]; arginine catabolic process to proline via ornithine [GO:0010121]; L-proline biosynthetic process [GO:0055129]	1	1
arginyl-tRNA aminoacylation [GO:0006420]	1	NA
aromatic compound catabolic process [GO:0019439]; epoxide metabolic process [GO:0097176]	1	2
Arp2/3 complex-mediated actin nucleation [GO:0034314]	1	NA
asparagine metabolic process [GO:0006528]; glutamine metabolic process [GO:0006541]; oxaloacetate metabolic process [GO:0006107]	1	NA
aspartate catabolic process [GO:0006533]; biosynthetic process [GO:0009058]	1	1
ATP metabolic process [GO:0046034]; nucleoside diphosphate phosphorylation [GO:0006165]; nucleoside triphosphate biosynthetic process [GO:0009142]	1	1
ATP metabolic process [GO:0046034]; vacuolar acidification [GO:0007035]	1	1
ATP synthesis coupled electron transport [GO:0042773]	2	2
autophagosome assembly [GO:0000045]; intracellular protein transport [GO:0006886]	1	1
autophagosome maturation [GO:0097352]; ER-associated misfolded protein catabolic process [GO:0071712]; mitotic spindle disassembly [GO:0051228]; retrograde protein transport, ER to cytosol [GO:0030970]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
beta-alanine biosynthetic process via 3-ureidopropionate [GO:0033396]	1	1
bioluminescence [GO:0008218]	2	2
bioluminescence [GO:0008218]; fatty-acyl-CoA biosynthetic process [GO:0046949]; long-chain fatty acid metabolic process [GO:0001676]	2	NA
bioluminescence [GO:0008218]; fatty acid metabolic process [GO:0006631]	1	NA
biosynthetic process [GO:0009058]	1	1
biosynthetic process [GO:0009058]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; lipid homeostasis [GO:0055088]	2	NA
biosynthetic process [GO:0009058]; L-alanine catabolic process [GO:0042853]	1	1
butanediol biosynthetic process [GO:0034079]	1	1
butyrate catabolic process [GO:0046359]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	1	NA
calcium ion transmembrane transport [GO:0070588]; cellular calcium ion homeostasis [GO:0006874]; ion transmembrane transport [GO:0034220]	1	1
cAMP-mediated signaling [GO:0019933]; cell morphogenesis [GO:0000902]; cytoskeleton organization [GO:0007010]; regulation of adenylate cyclase activity [GO:0045761]	1	NA
canonical glycolysis [GO:0061621]; fructose 1,6-bisphosphate metabolic process [GO:0030388]; fructose 6-phosphate metabolic process [GO:0006002]	1	1
cap-dependent translational initiation [GO:0002191]; formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	1	NA
carbohydrate metabolic process [GO:0005975]	7	3
carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	3	6
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; proteolysis [GO:0006508]; tricarboxylic acid cycle [GO:0006099]	1	NA
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
carbohydrate metabolic process [GO:0005975]; G protein-coupled receptor signaling pathway [GO:0007186]; protein phosphorylation [GO:0006468]; regulation of signal transduction [GO:0009966]	1	1
carbohydrate metabolic process [GO:0005975]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]	1	NA
carbohydrate metabolic process [GO:0005975]; glucosamine catabolic process [GO:0006043]; N-acetylglucosamine catabolic process [GO:0006046]; N-acetylneuraminate catabolic process [GO:0019262]	2	NA
carbohydrate metabolic process [GO:0005975]; glycerol-3-phosphate catabolic process [GO:0046168]; glycerophospholipid metabolic process [GO:0006650]	1	1
carbohydrate metabolic process [GO:0005975]; glycogen biosynthetic process [GO:0005978]	1	NA
carbohydrate metabolic process [GO:0005975]; glycosaminoglycan metabolic process [GO:0030203]; protein deglycosylation [GO:0006517]	2	NA
carbohydrate metabolic process [GO:0005975]; N-glycan processing [GO:0006491]	1	1
carbohydrate metabolic process [GO:0005975]; purine ribonucleoside salvage [GO:0006166]	1	NA
carboxylic acid metabolic process [GO:0019752]; tricarboxylic acid cycle [GO:0006099]	1	1
cell-matrix adhesion [GO:0007160]	2	2
cell adhesion [GO:0007155]; extracellular matrix organization [GO:0030198]	1	1
cell differentiation [GO:0030154]; gamete generation [GO:0007276]	1	1
cell division [GO:0051301]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]	1	NA
cell division [GO:0051301]; protein localization to microtubule [GO:0035372]; regulation of microtubule polymerization or depolymerization [GO:0031110]; spindle assembly [GO:0051225]	1	NA
cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; hydrogen peroxide catabolic process [GO:0042744]	1	NA
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]	1	1
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]; removal of superoxide radicals [GO:0019430]	1	1
cell wall mannoprotein biosynthetic process [GO:0000032]; GDP-mannose biosynthetic process [GO:0009298]; protein glycosylation [GO:0006486]	1	NA
cellular aldehyde metabolic process [GO:0006081]	1	2
cellular calcium ion homeostasis [GO:0006874]; regulation of cytosolic calcium ion concentration [GO:0051480]	1	1
cellular component organization [GO:0016043]	2	2
cellular component organization [GO:0016043]; cellular localization [GO:0051641]	1	1
cellular component organization [GO:0016043]; lipoprotein metabolic process [GO:0042157]	1	NA
cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]	1	NA
cellular ketone body metabolic process [GO:0046950]; ketone body catabolic process [GO:0046952]	1	NA
cellular macromolecule biosynthetic process [GO:0034645]	1	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; proton transmembrane transport [GO:1902600]; sodium ion export across plasma membrane [GO:0036376]	1	1
cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; negative regulation of TORC1 signaling [GO:1904262]; protein localization to lysosome [GO:0061462]; translation [GO:0006412]	1	1
cellular response to DNA damage stimulus [GO:0006974]; protein modification by small protein conjugation [GO:0032446]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
cellular response to heat [GO:0034605]; protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	1
cellular response to hypoxia [GO:0071456]; negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway [GO:1903298]	1	1
cellular response to oxidative stress [GO:0034599]	1	NA
cellular response to unfolded protein [GO:0034620]; chaperone cofactor-dependent protein refolding [GO:0051085]; protein refolding [GO:0042026]; vesicle-mediated transport [GO:0016192]	1	1
ceramide biosynthetic process [GO:0046513]; sphingomyelin catabolic process [GO:0006685]	3	NA
chaperone-mediated protein complex assembly [GO:0051131]; protein folding [GO:0006457]	1	NA
chaperone-mediated protein folding [GO:0061077]; protein peptidyl-prolyl isomerization [GO:0000413]	1	NA
chaperone cofactor-dependent protein refolding [GO:0051085]	2	NA
chloride transport [GO:0006821]	1	NA
chromatin remodeling [GO:0006338]	1	NA
citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]	1	1
COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum organization [GO:0007029]; intracellular protein transport [GO:0006886]	1	NA
COPII-coated vesicle cargo loading [GO:0090110]; intracellular protein transport [GO:0006886]	1	NA
cysteine biosynthetic process via cystathionine [GO:0019343]; transsulfuration [GO:0019346]	1	NA
cytolysis [GO:0019835]; defense response to bacterium [GO:0042742]; metabolic process [GO:0008152]	1	NA
cytoplasmic translation [GO:0002181]	6	6
cytoplasmic translation [GO:0002181]; ribosomal large subunit assembly [GO:0000027]	2	2
cytoplasmic translation [GO:0002181]; ribosomal large subunit biogenesis [GO:0042273]	1	2
cytoplasmic translation [GO:0002181]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	1
cytoplasmic translation [GO:0002181]; translational elongation [GO:0006414]	1	NA
cytoplasmic translational elongation [GO:0002182]	1	1
cytoplasmic translational initiation [GO:0002183]	1	1
cytoskeleton-dependent cytokinesis [GO:0061640]	1	NA
cytosolic ribosome assembly [GO:0042256]	1	1
D-gluconate catabolic process [GO:0046177]; pentose-phosphate shunt, oxidative branch [GO:0009051]	1	1
D-ribose metabolic process [GO:0006014]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]	1	NA
dephosphorylation [GO:0016311]	1	NA
dephosphorylation [GO:0016311]; L-serine biosynthetic process [GO:0006564]	1	NA
DNA integration [GO:0015074]; nucleosome assembly [GO:0006334]	1	1
DNA repair [GO:0006281]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	NA
endocytosis [GO:0006897]; endosomal transport [GO:0016197]	1	1
endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; regulation of endocytosis [GO:0030100]	1	1
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 3’-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000461]; translation [GO:0006412]	1	NA
endoplasmic reticulum-plasma membrane tethering [GO:0061817]; lipid transport [GO:0006869]	1	1
endoplasmic reticulum membrane organization [GO:0090158]; endoplasmic reticulum-plasma membrane tethering [GO:0061817]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi localization [GO:0051645]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; organelle transport along microtubule [GO:0072384]; protein secretion [GO:0009306]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
exocytosis [GO:0006887]	1	1
farnesyl diphosphate biosynthetic process [GO:0045337]; pheromone biosynthetic process [GO:0042811]	1	NA
fatty acid alpha-oxidation [GO:0001561]	2	1
fatty acid beta-oxidation [GO:0006635]	8	6
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	1	1
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; medium-chain fatty acid catabolic process [GO:0051793]	2	NA
fatty acid biosynthetic process [GO:0006633]	4	2
fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]	1	1
fatty acid metabolic process [GO:0006631]	2	1
folic acid metabolic process [GO:0046655]; glycine biosynthetic process from serine [GO:0019264]; L-serine catabolic process [GO:0006565]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; purine nucleobase biosynthetic process [GO:0009113]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	1	1
formaldehyde catabolic process [GO:0046294]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; regulation of translational initiation [GO:0006446]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	2	2
fructose 1,6-bisphosphate metabolic process [GO:0030388]; glycolytic process [GO:0006096]	1	1
fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	2	1
fumarate metabolic process [GO:0006106]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]	1	1
galactose metabolic process [GO:0006012]	2	1
gamma-aminobutyric acid catabolic process [GO:0009450]; neurotransmitter catabolic process [GO:0042135]	1	NA
gluconeogenesis [GO:0006094]	1	NA
gluconeogenesis [GO:0006094]; glucose 6-phosphate metabolic process [GO:0051156]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glyceraldehyde-3-phosphate biosynthetic process [GO:0046166]; glycerol catabolic process [GO:0019563]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; pyruvate metabolic process [GO:0006090]	1	1
glucose metabolic process [GO:0006006]; glycolytic process [GO:0006096]	1	1
glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]	1	NA
glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]	2	NA
glutamate catabolic process [GO:0006538]	1	1
glutamine metabolic process [GO:0006541]; GMP biosynthetic process [GO:0006177]	1	NA
glutamine metabolic process [GO:0006541]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	1	NA
glutathione biosynthetic process [GO:0006750]	1	NA
glutathione metabolic process [GO:0006749]	6	5
glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	NA
glycerol-3-phosphate metabolic process [GO:0006072]	1	1
glycine biosynthetic process, by transamination of glyoxylate [GO:0019265]	1	NA
glycine decarboxylation via glycine cleavage system [GO:0019464]	2	2
glycine decarboxylation via glycine cleavage system [GO:0019464]; protein lipoylation [GO:0009249]	1	NA
glycogen biosynthetic process [GO:0005978]; glycogen metabolic process [GO:0005977]; UDP-glucose metabolic process [GO:0006011]	1	1
glycogen catabolic process [GO:0005980]	1	1
glycolytic process [GO:0006096]	2	3
glycoside catabolic process [GO:0016139]; lipid metabolic process [GO:0006629]; oligosaccharide metabolic process [GO:0009311]	1	NA
glyoxylate cycle [GO:0006097]; isocitrate metabolic process [GO:0006102]; NADP metabolic process [GO:0006739]; tricarboxylic acid cycle [GO:0006099]	2	2
glyoxylate metabolic process [GO:0046487]	1	NA
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]	1	NA
heme biosynthetic process [GO:0006783]; protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
heterochromatin formation [GO:0031507]; nuclear envelope organization [GO:0006998]; nuclear migration [GO:0007097]; nuclear pore localization [GO:0051664]; protein localization to nuclear envelope [GO:0090435]	1	1
histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]	1	NA
homocysteine catabolic process [GO:0043418]; proteolysis [GO:0006508]; response to toxic substance [GO:0009636]	1	1
homogentisate catabolic process [GO:1902000]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	NA
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	1
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]	1	NA
hydrogen peroxide catabolic process [GO:0042744]; response to hydrogen peroxide [GO:0042542]	1	1
IMP salvage [GO:0032264]	1	NA
inositol catabolic process [GO:0019310]	1	NA
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]	1	NA
intermediate filament cytoskeleton organization [GO:0045104]	1	1
intracellular cholesterol transport [GO:0032367]; sterol transport [GO:0015918]	1	NA
intracellular protein transport [GO:0006886]; receptor-mediated endocytosis [GO:0006898]	1	1
intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]	1	NA
isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]	2	1
L-ascorbic acid biosynthetic process [GO:0019853]	1	NA
L-glutamate transmembrane transport [GO:0015813]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; lysine biosynthetic process via aminoadipic acid [GO:0019878]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; tricarboxylic acid cycle [GO:0006099]	1	1
L-methionine salvage from methylthioadenosine [GO:0019509]	1	NA
L-methionine salvage from methylthioadenosine [GO:0019509]; L-methionine salvage from S-adenosylmethionine [GO:0019284]	1	NA
L-phenylalanine catabolic process [GO:0006559]; tetrahydrobiopterin biosynthetic process [GO:0006729]	1	NA
L-phenylalanine catabolic process [GO:0006559]; tyrosine metabolic process [GO:0006570]	1	NA
leucine catabolic process [GO:0006552]	2	1
leucyl-tRNA aminoacylation [GO:0006429]	1	NA
lipid catabolic process [GO:0016042]	2	2
lipid transport [GO:0006869]	1	1
lipid transport [GO:0006869]; positive regulation of intracellular cholesterol transport [GO:0032385]	1	1
localization [GO:0051179]; response to external stimulus [GO:0009605]; signal transduction [GO:0007165]	1	NA
locomotion [GO:0040011]; post-embryonic development [GO:0009791]	1	1
malate metabolic process [GO:0006108]; NADH metabolic process [GO:0006734]; oxaloacetate metabolic process [GO:0006107]; tricarboxylic acid cycle [GO:0006099]	1	1
mannose metabolic process [GO:0006013]	1	NA
maturation of LSU-rRNA [GO:0000470]; translation [GO:0006412]	1	1
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	1	1
maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	NA
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; translation [GO:0006412]	1	1
meiotic cell cycle [GO:0051321]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	1
methylation [GO:0032259]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; regulation of gluconeogenesis [GO:0006111]; S-adenosylhomocysteine metabolic process [GO:0046498]; S-adenosylmethionine metabolic process [GO:0046500]; sarcosine metabolic process [GO:1901052]	1	1
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [GO:0019243]; RNA 3’-end processing [GO:0031123]	1	NA
microtubule-based movement [GO:0007018]	1	3
microtubule cytoskeleton organization [GO:0000226]; mitotic cell cycle [GO:0000278]	2	2
mitochondrial ADP transmembrane transport [GO:0140021]; mitochondrial ATP transmembrane transport [GO:1990544]	1	1
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	2	4
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process [GO:0043280]	1	1
mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	2	6
mitochondrial electron transport, succinate to ubiquinone [GO:0006121]; tricarboxylic acid cycle [GO:0006099]	1	1
mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]	3	4
mitochondrial translation [GO:0032543]	1	NA
mitochondrial translational elongation [GO:0070125]; translational elongation [GO:0006414]	1	1
mitochondrial tRNA 5’-end processing [GO:0097745]; tRNA 5’-leader removal [GO:0001682]	1	1
mitochondrion organization [GO:0007005]	1	3
mitotic cytokinesis [GO:0000281]	1	3
modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; translation [GO:0006412]	1	1
mRNA catabolic process [GO:0006402]; RNA-mediated gene silencing [GO:0031047]	1	1
mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]	1	1
mRNA splicing, via spliceosome [GO:0000398]	1	NA
mRNA splicing, via spliceosome [GO:0000398]; RNA metabolic process [GO:0016070]	1	NA
multicellular organism reproduction [GO:0032504]	3	3
muscle contraction [GO:0006936]	1	1
NADPH regeneration [GO:0006740]	1	1
negative regulation of endopeptidase activity [GO:0010951]; proteolysis [GO:0006508]	1	1
negative regulation of peptidase activity [GO:0010466]	1	2
negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein K48-linked deubiquitination [GO:1903094]; negative regulation of protein ubiquitination [GO:0031397]	1	NA
negative regulation of translation [GO:0017148]; translation [GO:0006412]	1	1
neurotransmitter catabolic process [GO:0042135]	1	NA
nitrogen compound metabolic process [GO:0006807]	1	3
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; translation [GO:0006412]	1	1
nucleoside phosphate metabolic process [GO:0006753]; ribose phosphate metabolic process [GO:0019693]	1	NA
nucleosome assembly [GO:0006334]	2	NA
nucleotide metabolic process [GO:0009117]	1	NA
ommochrome biosynthetic process [GO:0006727]; tryptophan catabolic process to acetyl-CoA [GO:0019442]; tryptophan catabolic process to kynurenine [GO:0019441]	1	NA
one-carbon metabolic process [GO:0006730]; S-adenosylmethionine cycle [GO:0033353]	1	1
organonitrogen compound catabolic process [GO:1901565]	1	NA
peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]	4	NA
peptide cross-linking [GO:0018149]	1	1
peptidyl-arginine methylation [GO:0018216]	1	NA
phenylalanyl-tRNA aminoacylation [GO:0006432]	1	NA
phosphocreatine biosynthetic process [GO:0046314]; phosphorylation [GO:0016310]	1	1
phosphorylation [GO:0016310]; selenocysteine biosynthetic process [GO:0016260]	1	NA
positive regulation of apoptotic signaling pathway [GO:2001235]; translation [GO:0006412]	1	1
positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of protein localization to early endosome [GO:1902966]; regulation of cell shape [GO:0008360]; regulation of organelle assembly [GO:1902115]	1	NA
positive regulation of protein phosphorylation [GO:0001934]; rescue of stalled ribosome [GO:0072344]	1	1
positive regulation of RNA polymerase II transcription preinitiation complex assembly [GO:0045899]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	NA
positive regulation of translational elongation [GO:0045901]; positive regulation of translational termination [GO:0045905]	1	1
proline catabolic process to glutamate [GO:0010133]	2	2
prostaglandin metabolic process [GO:0006693]	1	NA
proteasomal protein catabolic process [GO:0010498]	4	NA
proteasomal protein catabolic process [GO:0010498]; ubiquitin-dependent protein catabolic process [GO:0006511]	3	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	9	5
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; regulation of proteasomal protein catabolic process [GO:0061136]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of protein catabolic process [GO:0042176]	1	1
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]	1	NA
protein depalmitoylation [GO:0002084]	1	NA
protein dephosphorylation [GO:0006470]	1	1
protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein folding [GO:0006457]	6	5
protein folding [GO:0006457]; protein peptidyl-prolyl isomerization [GO:0000413]	1	1
protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	NA
protein folding [GO:0006457]; response to endoplasmic reticulum stress [GO:0034976]	2	2
protein folding [GO:0006457]; ubiquitin-dependent ERAD pathway [GO:0030433]	2	2
protein glycosylation [GO:0006486]	1	NA
protein initiator methionine removal involved in protein maturation [GO:0035551]	1	1
protein N-linked glycosylation [GO:0006487]	1	1
protein N-linked glycosylation via asparagine [GO:0018279]	2	3
protein phosphorylation [GO:0006468]	1	NA
protein processing [GO:0016485]	1	NA
protein processing involved in protein targeting to mitochondrion [GO:0006627]	1	1
protein refolding [GO:0042026]; response to heat [GO:0009408]	2	1
protein targeting to membrane [GO:0006612]	1	1
protein transport [GO:0015031]; small GTPase mediated signal transduction [GO:0007264]; vesicle-mediated transport [GO:0016192]	1	1
proteolysis [GO:0006508]	19	8
proteolysis involved in protein catabolic process [GO:0051603]	1	1
proteolysis involved in protein catabolic process [GO:0051603]; regulation of catalytic activity [GO:0050790]	4	2
proton motive force-driven ATP synthesis [GO:0015986]	6	6
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	1	1
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]; proton transmembrane transport [GO:1902600]	1	1
proton transmembrane transport [GO:1902600]	1	1
purine nucleobase metabolic process [GO:0006144]; purine nucleotide metabolic process [GO:0006163]	1	NA
pyrimidine nucleobase catabolic process [GO:0006208]	1	NA
regulation of actin cytoskeleton organization [GO:0032956]	1	1
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]	1	NA
regulation of DNA-templated transcription [GO:0006355]	1	1
regulation of mitotic cell cycle [GO:0007346]; signal transduction [GO:0007165]	1	1
regulation of muscle contraction [GO:0006937]; skeletal muscle contraction [GO:0003009]	3	2
regulation of protein catabolic process [GO:0042176]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
regulation of protein phosphorylation [GO:0001932]	1	NA
removal of superoxide radicals [GO:0019430]	1	1
response to endoplasmic reticulum stress [GO:0034976]	1	NA
response to hormone [GO:0009725]	1	1
Rho protein signal transduction [GO:0007266]	1	NA
ribosomal large subunit assembly [GO:0000027]; translation [GO:0006412]	1	2
ribosomal large subunit biogenesis [GO:0042273]; translation [GO:0006412]	1	1
ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]; translation [GO:0006412]	1	1
ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	1	1
ribosomal subunit export from nucleus [GO:0000054]; translational initiation [GO:0006413]; translational termination [GO:0006415]	1	NA
ribosome biogenesis [GO:0042254]	1	1
RNA-mediated gene silencing [GO:0031047]	1	1
sarcosine catabolic process [GO:1901053]	1	1
sensory perception of smell [GO:0007608]	3	2
sequestering of actin monomers [GO:0042989]	1	1
seryl-tRNA aminoacylation [GO:0006434]	1	NA
signal transduction [GO:0007165]	2	1
sorbitol catabolic process [GO:0006062]	1	1
spermine biosynthetic process [GO:0006597]	1	NA
succinyl-CoA metabolic process [GO:0006104]; tricarboxylic acid cycle [GO:0006099]	2	1
tetrahydrofolate interconversion [GO:0035999]	1	1
threonyl-tRNA aminoacylation [GO:0006435]	1	NA
thymine catabolic process [GO:0006210]; valine catabolic process [GO:0006574]	1	1
translation [GO:0006412]	22	20
translation [GO:0006412]; translational elongation [GO:0006414]	2	2
translational elongation [GO:0006414]	3	2
trehalose biosynthetic process [GO:0005992]	1	1
tricarboxylic acid cycle [GO:0006099]	3	3
tRNA modification [GO:0006400]; tRNA-guanine transglycosylation [GO:0101030]	1	1
tRNA processing [GO:0008033]	1	NA
tryptophan catabolic process to kynurenine [GO:0019441]	1	NA
tyrosine catabolic process [GO:0006572]	1	NA
tyrosyl-tRNA aminoacylation [GO:0006437]	1	NA
ubiquitin-dependent protein catabolic process [GO:0006511]	3	NA
valine catabolic process [GO:0006574]	1	1
valyl-tRNA aminoacylation [GO:0006438]	1	NA
vesicle-mediated transport [GO:0016192]	1	1
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]; cell morphogenesis [GO:0000902]; negative regulation of filopodium assembly [GO:0051490]; regulation of lamellipodium assembly [GO:0010591]	NA	1
actin filament organization [GO:0007015]; cell migration [GO:0016477]; cortical cytoskeleton organization [GO:0030865]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	NA	1
actin filament organization [GO:0007015]; cortical cytoskeleton organization [GO:0030865]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; motor neuron axon guidance [GO:0008045]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	NA	1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]	NA	1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]	NA	1
aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial respiratory chain complex I assembly [GO:0032981]	NA	1
aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]	NA	1
aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]	NA	1
amino acid transport [GO:0006865]; carbohydrate metabolic process [GO:0005975]	NA	1
AMP catabolic process [GO:0006196]	NA	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]	NA	2
animal organ development [GO:0048513]; cell development [GO:0048468]; cell migration [GO:0016477]; morphogenesis of an epithelium [GO:0002009]; signal transduction [GO:0007165]	NA	1
animal organ development [GO:0048513]; cell morphogenesis involved in differentiation [GO:0000904]; cellular component organization [GO:0016043]; system development [GO:0048731]	NA	1
animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; tissue development [GO:0009888]	NA	1
animal organ morphogenesis [GO:0009887]; cell migration [GO:0016477]; cellular component organization [GO:0016043]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]	NA	1
apoptotic process [GO:0006915]	NA	1
apoptotic process [GO:0006915]; mitochondrial respiratory chain complex assembly [GO:0033108]; programmed cell death [GO:0012501]	NA	1
aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]	NA	1
autophagy of mitochondrion [GO:0000422]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; peroxisome fission [GO:0016559]	NA	1
axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	NA	1
bioluminescence [GO:0008218]; triglyceride homeostasis [GO:0070328]	NA	1
box H/ACA RNA 3’-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]	NA	1
calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]	NA	1
carbohydrate metabolic process [GO:0005975]; glucosylceramide catabolic process [GO:0006680]	NA	1
carnitine transmembrane transport [GO:1902603]; mitochondrial transport [GO:0006839]	NA	1
cell adhesion [GO:0007155]	NA	2
cell adhesion mediated by integrin [GO:0033627]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]	NA	1
cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]	NA	1
cellular calcium ion homeostasis [GO:0006874]	NA	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]	NA	1
cellular response to amino acid starvation [GO:0034198]; microtubule cytoskeleton organization [GO:0000226]; regulation of translation [GO:0006417]	NA	1
cellular response to cAMP [GO:0071320]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; Rap protein signal transduction [GO:0032486]	NA	1
cholesterol metabolic process [GO:0008203]; endocytosis [GO:0006897]; lipid transport [GO:0006869]	NA	1
cristae formation [GO:0042407]	NA	2
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]	NA	1
dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked mannosylation [GO:0035269]	NA	1
electron transport chain [GO:0022900]	NA	1
endocytic recycling [GO:0032456]; Golgi vesicle fusion to target membrane [GO:0048210]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]	NA	1
endocytosis [GO:0006897]	NA	1
endoplasmic reticulum organization [GO:0007029]; protein homooligomerization [GO:0051260]	NA	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	NA	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]	NA	2
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]	NA	1
endoplasmic reticulum tubular network organization [GO:0071786]; membrane organization [GO:0061024]	NA	1
fatty acid beta-oxidation [GO:0006635]; long-chain fatty acid import into peroxisome [GO:0015910]; peroxisome organization [GO:0007031]; very long-chain fatty acid catabolic process [GO:0042760]	NA	1
fatty acid metabolic process [GO:0006631]; glycerol-3-phosphate metabolic process [GO:0006072]; phospholipid biosynthetic process [GO:0008654]; triglyceride biosynthetic process [GO:0019432]	NA	1
formation of cytoplasmic translation initiation complex [GO:0001732]; translation reinitiation [GO:0002188]	NA	1
G protein-coupled receptor signaling pathway [GO:0007186]	NA	1
G1/S transition of mitotic cell cycle [GO:0000082]; hippo signaling [GO:0035329]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of apoptotic process [GO:0043065]; regulation of organ growth [GO:0046620]	NA	1
glycerol catabolic process [GO:0019563]; glycerol metabolic process [GO:0006071]; glycerol-3-phosphate biosynthetic process [GO:0046167]; phosphorylation [GO:0016310]; triglyceride metabolic process [GO:0006641]	NA	1
glycolipid biosynthetic process [GO:0009247]	NA	1
Golgi to plasma membrane protein transport [GO:0043001]; intra-Golgi vesicle-mediated transport [GO:0006891]; SNARE complex disassembly [GO:0035494]	NA	1
heme transport [GO:0015886]; transmembrane transport [GO:0055085]	NA	1
inner mitochondrial membrane organization [GO:0007007]	NA	1
intracellular protein transport [GO:0006886]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]	NA	1
intracellular signal transduction [GO:0035556]	NA	1
intraciliary retrograde transport [GO:0035721]; non-motile cilium assembly [GO:1905515]; protein localization to cilium [GO:0061512]	NA	1
ion transport [GO:0006811]; phototransduction [GO:0007602]	NA	1
iron ion homeostasis [GO:0055072]; iron ion transport [GO:0006826]	NA	1
iron ion transport [GO:0006826]	NA	1
long-chain fatty-acyl-CoA metabolic process [GO:0035336]	NA	3
malate transmembrane transport [GO:0071423]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; succinate transmembrane transport [GO:0071422]; sulfate transport [GO:0008272]; thiosulfate transport [GO:0015709]	NA	2
membrane protein proteolysis [GO:0033619]; signal peptide processing [GO:0006465]	NA	1
methylation [GO:0032259]	NA	1
mitochondrial citrate transmembrane transport [GO:0006843]	NA	1
mitochondrial fission [GO:0000266]; rhythmic process [GO:0048511]	NA	1
mitochondrial phosphate ion transmembrane transport [GO:1990547]; phosphate ion transmembrane transport [GO:0035435]	NA	1
mitochondrial respiratory chain complex assembly [GO:0033108]; protein insertion into mitochondrial outer membrane [GO:0045040]	NA	1
mitochondrial respiratory chain complex I assembly [GO:0032981]	NA	1
mitochondrial respiratory chain complex I assembly [GO:0032981]; response to oxidative stress [GO:0006979]	NA	1
mitochondrial transmembrane transport [GO:1990542]; serine import into mitochondrion [GO:0140300]	NA	2
mitochondrion organization [GO:0007005]; negative regulation of apoptotic process [GO:0043066]; protein folding [GO:0006457]; response to heat [GO:0009408]	NA	1
mitochondrion organization [GO:0007005]; protein transport [GO:0015031]	NA	1
muscle contraction [GO:0006936]; sarcomere organization [GO:0045214]	NA	1
NADPH regeneration [GO:0006740]; proton transmembrane transport [GO:1902600]	NA	1
negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]	NA	1
neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]	NA	1
neuropeptide signaling pathway [GO:0007218]	NA	1
nucleoside diphosphate catabolic process [GO:0009134]	NA	1
peptidyl-aspartic acid hydroxylation [GO:0042264]	NA	1
phosphatidylinositol dephosphorylation [GO:0046856]	NA	1
pointed-end actin filament capping [GO:0051694]	NA	1
positive regulation of voltage-gated potassium channel activity [GO:1903818]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic transmission, cholinergic [GO:0032222]; rhythmic process [GO:0048511]; sleep [GO:0030431]	NA	1
post-translational protein modification [GO:0043687]; protein N-linked glycosylation via asparagine [GO:0018279]	NA	1
post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	NA	2
protein import into mitochondrial matrix [GO:0030150]	NA	1
protein import into nucleus [GO:0006606]	NA	3
protein maturation [GO:0051604]	NA	1
protein phosphorylation [GO:0006468]; Wnt signaling pathway [GO:0016055]	NA	1
protein targeting [GO:0006605]; protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	NA	1
protein targeting to ER [GO:0045047]	NA	1
protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]	NA	1
protein transport [GO:0015031]	NA	1
regulation of gene expression [GO:0010468]	NA	1
respiratory electron transport chain [GO:0022904]	NA	2
response to oxidative stress [GO:0006979]	NA	1
ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	NA	2
RNA phosphodiester bond hydrolysis, exonucleolytic [GO:0090503]	NA	1
SCF complex assembly [GO:0010265]	NA	1
SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	NA	2
sulfation [GO:0051923]	NA	1
transmembrane transport [GO:0055085]	NA	4
trehalose catabolic process [GO:0005993]	NA	1
ubiquinone-6 biosynthetic process [GO:1901006]	NA	1
vacuolar acidification [GO:0007035]	NA	1
vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]	NA	1
very long-chain fatty acid biosynthetic process [GO:0042761]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
‘de novo’ AMP biosynthetic process [GO:0044208]; ‘de novo’ IMP biosynthetic process [GO:0006189]
‘de novo’ AMP biosynthetic process [GO:0044208]; IMP metabolic process [GO:0046040]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; beta-alanine biosynthetic process [GO:0019483]; thymine catabolic process [GO:0006210]; uracil catabolic process [GO:0006212]
2-oxoglutarate metabolic process [GO:0006103]
3’-phosphoadenosine 5’-phosphosulfate biosynthetic process [GO:0050428]; sulfate assimilation [GO:0000103]
actin filament depolymerization [GO:0030042]; locomotion [GO:0040011]; positive regulation of actin filament depolymerization [GO:0030836]; sarcomere organization [GO:0045214]
actin filament organization [GO:0007015]
activation of GTPase activity [GO:0090630]; nucleocytoplasmic transport [GO:0006913]; signal transduction [GO:0007165]
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; ATP metabolic process [GO:0046034]; phosphorylation [GO:0016310]
alanyl-tRNA aminoacylation [GO:0006419]; tRNA modification [GO:0006400]
ammonia assimilation cycle [GO:0019676]; glutamate biosynthetic process [GO:0006537]; L-glutamate biosynthetic process [GO:0097054]
androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]
anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; axon guidance [GO:0007411]; cytoskeleton-dependent intracellular transport [GO:0030705]; microtubule-based movement [GO:0007018]; synaptic vesicle transport [GO:0048489]
arginyl-tRNA aminoacylation [GO:0006420]
Arp2/3 complex-mediated actin nucleation [GO:0034314]
asparagine metabolic process [GO:0006528]; glutamine metabolic process [GO:0006541]; oxaloacetate metabolic process [GO:0006107]
bioluminescence [GO:0008218]; fatty-acyl-CoA biosynthetic process [GO:0046949]; long-chain fatty acid metabolic process [GO:0001676]
bioluminescence [GO:0008218]; fatty acid metabolic process [GO:0006631]
biosynthetic process [GO:0009058]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; lipid homeostasis [GO:0055088]
butyrate catabolic process [GO:0046359]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]
cAMP-mediated signaling [GO:0019933]; cell morphogenesis [GO:0000902]; cytoskeleton organization [GO:0007010]; regulation of adenylate cyclase activity [GO:0045761]
cap-dependent translational initiation [GO:0002191]; formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; proteolysis [GO:0006508]; tricarboxylic acid cycle [GO:0006099]
carbohydrate metabolic process [GO:0005975]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]
carbohydrate metabolic process [GO:0005975]; glucosamine catabolic process [GO:0006043]; N-acetylglucosamine catabolic process [GO:0006046]; N-acetylneuraminate catabolic process [GO:0019262]
carbohydrate metabolic process [GO:0005975]; glycogen biosynthetic process [GO:0005978]
carbohydrate metabolic process [GO:0005975]; glycosaminoglycan metabolic process [GO:0030203]; protein deglycosylation [GO:0006517]
carbohydrate metabolic process [GO:0005975]; purine ribonucleoside salvage [GO:0006166]
cell division [GO:0051301]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]
cell division [GO:0051301]; protein localization to microtubule [GO:0035372]; regulation of microtubule polymerization or depolymerization [GO:0031110]; spindle assembly [GO:0051225]
cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; hydrogen peroxide catabolic process [GO:0042744]
cell wall mannoprotein biosynthetic process [GO:0000032]; GDP-mannose biosynthetic process [GO:0009298]; protein glycosylation [GO:0006486]
cellular component organization [GO:0016043]; lipoprotein metabolic process [GO:0042157]
cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]
cellular ketone body metabolic process [GO:0046950]; ketone body catabolic process [GO:0046952]
cellular response to oxidative stress [GO:0034599]
ceramide biosynthetic process [GO:0046513]; sphingomyelin catabolic process [GO:0006685]
chaperone-mediated protein complex assembly [GO:0051131]; protein folding [GO:0006457]
chaperone-mediated protein folding [GO:0061077]; protein peptidyl-prolyl isomerization [GO:0000413]
chaperone cofactor-dependent protein refolding [GO:0051085]
chloride transport [GO:0006821]
chromatin remodeling [GO:0006338]
COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum organization [GO:0007029]; intracellular protein transport [GO:0006886]
COPII-coated vesicle cargo loading [GO:0090110]; intracellular protein transport [GO:0006886]
cysteine biosynthetic process via cystathionine [GO:0019343]; transsulfuration [GO:0019346]
cytolysis [GO:0019835]; defense response to bacterium [GO:0042742]; metabolic process [GO:0008152]
cytoplasmic translation [GO:0002181]; translational elongation [GO:0006414]
cytoskeleton-dependent cytokinesis [GO:0061640]
D-ribose metabolic process [GO:0006014]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]
dephosphorylation [GO:0016311]
dephosphorylation [GO:0016311]; L-serine biosynthetic process [GO:0006564]
DNA repair [GO:0006281]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 3’-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000461]; translation [GO:0006412]
farnesyl diphosphate biosynthetic process [GO:0045337]; pheromone biosynthetic process [GO:0042811]
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; medium-chain fatty acid catabolic process [GO:0051793]
formaldehyde catabolic process [GO:0046294]
gamma-aminobutyric acid catabolic process [GO:0009450]; neurotransmitter catabolic process [GO:0042135]
gluconeogenesis [GO:0006094]
glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]
glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]
glutamine metabolic process [GO:0006541]; GMP biosynthetic process [GO:0006177]
glutamine metabolic process [GO:0006541]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]
glutathione biosynthetic process [GO:0006750]
glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]
glycine biosynthetic process, by transamination of glyoxylate [GO:0019265]
glycine decarboxylation via glycine cleavage system [GO:0019464]; protein lipoylation [GO:0009249]
glycoside catabolic process [GO:0016139]; lipid metabolic process [GO:0006629]; oligosaccharide metabolic process [GO:0009311]
glyoxylate metabolic process [GO:0046487]
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]
heme biosynthetic process [GO:0006783]; protoporphyrinogen IX biosynthetic process [GO:0006782]
histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]
homogentisate catabolic process [GO:1902000]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]
IMP salvage [GO:0032264]
inositol catabolic process [GO:0019310]
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]
intracellular cholesterol transport [GO:0032367]; sterol transport [GO:0015918]
intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]
L-ascorbic acid biosynthetic process [GO:0019853]
L-methionine salvage from methylthioadenosine [GO:0019509]
L-methionine salvage from methylthioadenosine [GO:0019509]; L-methionine salvage from S-adenosylmethionine [GO:0019284]
L-phenylalanine catabolic process [GO:0006559]; tetrahydrobiopterin biosynthetic process [GO:0006729]
L-phenylalanine catabolic process [GO:0006559]; tyrosine metabolic process [GO:0006570]
leucyl-tRNA aminoacylation [GO:0006429]
localization [GO:0051179]; response to external stimulus [GO:0009605]; signal transduction [GO:0007165]
mannose metabolic process [GO:0006013]
maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [GO:0019243]; RNA 3’-end processing [GO:0031123]
mitochondrial translation [GO:0032543]
mRNA splicing, via spliceosome [GO:0000398]
mRNA splicing, via spliceosome [GO:0000398]; RNA metabolic process [GO:0016070]
negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein K48-linked deubiquitination [GO:1903094]; negative regulation of protein ubiquitination [GO:0031397]
neurotransmitter catabolic process [GO:0042135]
nucleoside phosphate metabolic process [GO:0006753]; ribose phosphate metabolic process [GO:0019693]
nucleosome assembly [GO:0006334]
nucleotide metabolic process [GO:0009117]
ommochrome biosynthetic process [GO:0006727]; tryptophan catabolic process to acetyl-CoA [GO:0019442]; tryptophan catabolic process to kynurenine [GO:0019441]
organonitrogen compound catabolic process [GO:1901565]
peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]
peptidyl-arginine methylation [GO:0018216]
phenylalanyl-tRNA aminoacylation [GO:0006432]
phosphorylation [GO:0016310]; selenocysteine biosynthetic process [GO:0016260]
positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of protein localization to early endosome [GO:1902966]; regulation of cell shape [GO:0008360]; regulation of organelle assembly [GO:1902115]
positive regulation of RNA polymerase II transcription preinitiation complex assembly [GO:0045899]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin-dependent ERAD pathway [GO:0030433]
prostaglandin metabolic process [GO:0006693]
proteasomal protein catabolic process [GO:0010498]
proteasomal protein catabolic process [GO:0010498]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; regulation of proteasomal protein catabolic process [GO:0061136]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]
protein depalmitoylation [GO:0002084]
protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein folding [GO:0006457]; protein stabilization [GO:0050821]
protein glycosylation [GO:0006486]
protein phosphorylation [GO:0006468]
protein processing [GO:0016485]
purine nucleobase metabolic process [GO:0006144]; purine nucleotide metabolic process [GO:0006163]
pyrimidine nucleobase catabolic process [GO:0006208]
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]
regulation of protein phosphorylation [GO:0001932]
response to endoplasmic reticulum stress [GO:0034976]
Rho protein signal transduction [GO:0007266]
ribosomal subunit export from nucleus [GO:0000054]; translational initiation [GO:0006413]; translational termination [GO:0006415]
seryl-tRNA aminoacylation [GO:0006434]
spermine biosynthetic process [GO:0006597]
threonyl-tRNA aminoacylation [GO:0006435]
tRNA processing [GO:0008033]
tryptophan catabolic process to kynurenine [GO:0019441]
tyrosine catabolic process [GO:0006572]
tyrosyl-tRNA aminoacylation [GO:0006437]
ubiquitin-dependent protein catabolic process [GO:0006511]
valyl-tRNA aminoacylation [GO:0006438]

kable(BP[is.na(BP[,2])==TRUE,1])

x
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]; cell morphogenesis [GO:0000902]; negative regulation of filopodium assembly [GO:0051490]; regulation of lamellipodium assembly [GO:0010591]
actin filament organization [GO:0007015]; cell migration [GO:0016477]; cortical cytoskeleton organization [GO:0030865]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]
actin filament organization [GO:0007015]; cortical cytoskeleton organization [GO:0030865]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; motor neuron axon guidance [GO:0008045]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]
aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial respiratory chain complex I assembly [GO:0032981]
aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]
aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]
amino acid transport [GO:0006865]; carbohydrate metabolic process [GO:0005975]
AMP catabolic process [GO:0006196]
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]
animal organ development [GO:0048513]; cell development [GO:0048468]; cell migration [GO:0016477]; morphogenesis of an epithelium [GO:0002009]; signal transduction [GO:0007165]
animal organ development [GO:0048513]; cell morphogenesis involved in differentiation [GO:0000904]; cellular component organization [GO:0016043]; system development [GO:0048731]
animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; tissue development [GO:0009888]
animal organ morphogenesis [GO:0009887]; cell migration [GO:0016477]; cellular component organization [GO:0016043]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]
apoptotic process [GO:0006915]
apoptotic process [GO:0006915]; mitochondrial respiratory chain complex assembly [GO:0033108]; programmed cell death [GO:0012501]
aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]
autophagy of mitochondrion [GO:0000422]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; peroxisome fission [GO:0016559]
axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]
bioluminescence [GO:0008218]; triglyceride homeostasis [GO:0070328]
box H/ACA RNA 3’-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]
calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]
carbohydrate metabolic process [GO:0005975]; glucosylceramide catabolic process [GO:0006680]
carnitine transmembrane transport [GO:1902603]; mitochondrial transport [GO:0006839]
cell adhesion [GO:0007155]
cell adhesion mediated by integrin [GO:0033627]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]
cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]
cellular calcium ion homeostasis [GO:0006874]
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]
cellular response to amino acid starvation [GO:0034198]; microtubule cytoskeleton organization [GO:0000226]; regulation of translation [GO:0006417]
cellular response to cAMP [GO:0071320]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; Rap protein signal transduction [GO:0032486]
cholesterol metabolic process [GO:0008203]; endocytosis [GO:0006897]; lipid transport [GO:0006869]
cristae formation [GO:0042407]
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]
dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked mannosylation [GO:0035269]
electron transport chain [GO:0022900]
endocytic recycling [GO:0032456]; Golgi vesicle fusion to target membrane [GO:0048210]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]
endocytosis [GO:0006897]
endoplasmic reticulum organization [GO:0007029]; protein homooligomerization [GO:0051260]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]
endoplasmic reticulum tubular network organization [GO:0071786]; membrane organization [GO:0061024]
fatty acid beta-oxidation [GO:0006635]; long-chain fatty acid import into peroxisome [GO:0015910]; peroxisome organization [GO:0007031]; very long-chain fatty acid catabolic process [GO:0042760]
fatty acid metabolic process [GO:0006631]; glycerol-3-phosphate metabolic process [GO:0006072]; phospholipid biosynthetic process [GO:0008654]; triglyceride biosynthetic process [GO:0019432]
formation of cytoplasmic translation initiation complex [GO:0001732]; translation reinitiation [GO:0002188]
G protein-coupled receptor signaling pathway [GO:0007186]
G1/S transition of mitotic cell cycle [GO:0000082]; hippo signaling [GO:0035329]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of apoptotic process [GO:0043065]; regulation of organ growth [GO:0046620]
glycerol catabolic process [GO:0019563]; glycerol metabolic process [GO:0006071]; glycerol-3-phosphate biosynthetic process [GO:0046167]; phosphorylation [GO:0016310]; triglyceride metabolic process [GO:0006641]
glycolipid biosynthetic process [GO:0009247]
Golgi to plasma membrane protein transport [GO:0043001]; intra-Golgi vesicle-mediated transport [GO:0006891]; SNARE complex disassembly [GO:0035494]
heme transport [GO:0015886]; transmembrane transport [GO:0055085]
inner mitochondrial membrane organization [GO:0007007]
intracellular protein transport [GO:0006886]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]
intracellular signal transduction [GO:0035556]
intraciliary retrograde transport [GO:0035721]; non-motile cilium assembly [GO:1905515]; protein localization to cilium [GO:0061512]
ion transport [GO:0006811]; phototransduction [GO:0007602]
iron ion homeostasis [GO:0055072]; iron ion transport [GO:0006826]
iron ion transport [GO:0006826]
long-chain fatty-acyl-CoA metabolic process [GO:0035336]
malate transmembrane transport [GO:0071423]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; succinate transmembrane transport [GO:0071422]; sulfate transport [GO:0008272]; thiosulfate transport [GO:0015709]
membrane protein proteolysis [GO:0033619]; signal peptide processing [GO:0006465]
methylation [GO:0032259]
mitochondrial citrate transmembrane transport [GO:0006843]
mitochondrial fission [GO:0000266]; rhythmic process [GO:0048511]
mitochondrial phosphate ion transmembrane transport [GO:1990547]; phosphate ion transmembrane transport [GO:0035435]
mitochondrial respiratory chain complex assembly [GO:0033108]; protein insertion into mitochondrial outer membrane [GO:0045040]
mitochondrial respiratory chain complex I assembly [GO:0032981]
mitochondrial respiratory chain complex I assembly [GO:0032981]; response to oxidative stress [GO:0006979]
mitochondrial transmembrane transport [GO:1990542]; serine import into mitochondrion [GO:0140300]
mitochondrion organization [GO:0007005]; negative regulation of apoptotic process [GO:0043066]; protein folding [GO:0006457]; response to heat [GO:0009408]
mitochondrion organization [GO:0007005]; protein transport [GO:0015031]
muscle contraction [GO:0006936]; sarcomere organization [GO:0045214]
NADPH regeneration [GO:0006740]; proton transmembrane transport [GO:1902600]
negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]
neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]
neuropeptide signaling pathway [GO:0007218]
nucleoside diphosphate catabolic process [GO:0009134]
peptidyl-aspartic acid hydroxylation [GO:0042264]
phosphatidylinositol dephosphorylation [GO:0046856]
pointed-end actin filament capping [GO:0051694]
positive regulation of voltage-gated potassium channel activity [GO:1903818]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic transmission, cholinergic [GO:0032222]; rhythmic process [GO:0048511]; sleep [GO:0030431]
post-translational protein modification [GO:0043687]; protein N-linked glycosylation via asparagine [GO:0018279]
post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]
protein import into mitochondrial matrix [GO:0030150]
protein import into nucleus [GO:0006606]
protein maturation [GO:0051604]
protein phosphorylation [GO:0006468]; Wnt signaling pathway [GO:0016055]
protein targeting [GO:0006605]; protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
protein targeting to ER [GO:0045047]
protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]
protein transport [GO:0015031]
regulation of gene expression [GO:0010468]
respiratory electron transport chain [GO:0022904]
response to oxidative stress [GO:0006979]
ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]
RNA phosphodiester bond hydrolysis, exonucleolytic [GO:0090503]
SCF complex assembly [GO:0010265]
SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
sulfation [GO:0051923]
transmembrane transport [GO:0055085]
trehalose catabolic process [GO:0005993]
ubiquinone-6 biosynthetic process [GO:1901006]
vacuolar acidification [GO:0007035]
vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]
very long-chain fatty acid biosynthetic process [GO:0042761]

tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_bp <- c(results_comp_bp, tmp/(length(BP[,1])))
name_comp_bp <- c(name_comp_bp, "graph2A-D1+D2","graph2A-onlyD1","graph2A-onlyD2")

4.2 B

#D1_uni <- GetProteinGOInfo(E5_D1_b)
#saveRDS(D1_uni,"./go_terms/graph2_E5_D1_uni.RDS")
GO_1 <- readRDS("./go_terms/graph2_E5_D1_uni.RDS")
#D2_uni <- GetProteinGOInfo(E5_D2_b)
#saveRDS(D2_uni,"./go_terms/graph2_E5_D2_uni.RDS")
GO_2 <- readRDS("./go_terms/graph2_E5_D2_uni.RDS")
#D4_uni <- GetProteinGOInfo(E5_D4_b)
#saveRDS(D4_uni,"./go_terms/graph2_E5_D4_uni.RDS")
GO_3 <- readRDS("./go_terms/graph2_E5_D4_uni.RDS")
################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_3$Gene.Ontology..molecular.function.))
t_BP_sorted_3 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
# schauen wo 
#esults_comp <- c(results_comp, length(BP[,1]))
#results_comp <- c(results_comp,sum(is.na(BP$Freq.x) & !is.na(BP$Freq.y)))
#results_comp <- c(results_comp,sum(is.na(BP$Freq.y) & !is.na(BP$Freq)))
#results_com <- c(results_comp, )
#name_comp <- c(name_comp, 
#               "graph2B-alle",
#               "graph-2B-nur", "graph-2B D1b to D2")
colnames(BP) <- c("Function", "D1: Phosphate buffer", "D1b: Carbonate buffer", "D2: Phosphate buffer with urea-triton X")

kable(BP)

Function	D1: Phosphate buffer	D1b: Carbonate buffer	D2: Phosphate buffer with urea-triton X
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	NA	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	NA	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	NA	NA
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1	NA
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1	NA
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	1	NA	NA
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	1	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1	1
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	NA	NA
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1	NA
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1	NA
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1	NA
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	1	NA	NA
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1	NA
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	NA	NA
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	1	1	NA
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	1	1	NA
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	1	NA	NA
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1	NA
6-phosphogluconolactonase activity [GO:0017057]	1	NA	NA
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1	NA
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	1	1	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1	1
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	NA	NA
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	1	NA
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	NA	NA
actin binding [GO:0003779]	3	2	1
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1	NA
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	1	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	NA	NA
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	1	NA
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1	1
actin filament binding [GO:0051015]	7	7	4
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	1	NA	NA
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	2	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1	NA
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1	NA
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	1	NA	NA
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	1	NA	NA
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	2	1	1
actin monomer binding [GO:0003785]	2	2	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	1	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	2	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	1	NA	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	NA	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	NA	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	1	2	1
adenosylhomocysteinase activity [GO:0004013]	1	1	NA
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2	1
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1	NA
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	NA	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	1	1	NA
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1	NA
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	1	3	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	2	1
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1	NA
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	3	1	NA
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1	NA
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	1	NA	NA
alkaline phosphatase activity [GO:0004035]	1	1	1
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1	1
alpha-galactosidase activity [GO:0004557]	2	NA	1
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	2	1	NA
alpha-L-fucosidase activity [GO:0004560]	3	2	NA
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	1	1	NA
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	1	NA	NA
amino acid kinase activity [GO:0019202]	1	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	1	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	NA	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	NA	NA
aminoacylase activity [GO:0004046]	2	2	1
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1	NA
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1	NA
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1	NA
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA	NA
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1	NA
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1	NA
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1	NA
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	NA	NA
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1	1
arylformamidase activity [GO:0004061]	1	1	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	1	1	NA
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	1	NA	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	6	5	2
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	NA	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	NA	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	1	NA	NA
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]	1	1	NA
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1	NA
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1	NA
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	1	1	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	1	NA
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1	NA
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1	NA
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	1	1	NA
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	NA	NA
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	1	NA	NA
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	NA	NA
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1	NA
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1	1
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	NA	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	1	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	NA	NA
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	2	2	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	NA	NA
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	1	NA	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	NA	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1	NA
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	1	1	NA
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	1	1	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	1	NA	NA
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1	1
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	NA	NA
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	NA	NA
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1	NA
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA	NA
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1	NA
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	1	1	NA
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	1	1	1
beta-glucosidase activity [GO:0008422]	1	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	1	1	NA
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	NA	NA
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1	NA
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1	1
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	1	NA	NA
calcium ion binding [GO:0005509]	13	10	4
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	4	1
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	1	1	NA
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	1	NA	NA
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	1	NA	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	2	1
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	2	1	NA
carbohydrate binding [GO:0030246]	2	NA	1
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	NA	NA
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	NA	NA
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1	NA
carbonyl reductase (NADPH) activity [GO:0004090]	1	1	NA
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	NA	NA
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	1	NA	NA
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	NA	NA
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA	NA
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	1	NA
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1	1
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1	1
cell adhesion molecule binding [GO:0050839]	1	2	2
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1	NA
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	NA	NA
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	1	NA	NA
chitin binding [GO:0008061]	4	3	4
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	1	2	2
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]	1	NA	NA
chloride channel activity [GO:0005254]	1	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]	1	NA	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	1	NA	NA
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	1	2	1
citrate (Si)-synthase activity [GO:0004108]	1	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	NA	NA
citrate secondary active transmembrane transporter activity [GO:0071913]	1	1	1
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	1	1	1
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	4	1	NA
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	3	NA	NA
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	1	NA	NA
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1	NA
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]	1	NA	NA
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2	2
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]	1	NA	NA
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1	1
cystathionine beta-synthase activity [GO:0004122]	1	NA	NA
cysteine-type deubiquitinase activity [GO:0004843]	1	NA	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	NA	NA
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	NA	NA
cysteine-type endopeptidase activity [GO:0004197]	8	6	NA
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1	1
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]	1	NA	NA
D-ribulokinase activity [GO:0019150]	1	NA	NA
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	1	NA	NA
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]	1	NA	NA
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	1	NA	NA
deaminase activity [GO:0019239]	1	1	NA
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	1	1	NA
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	1	1	NA
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1	1
dihydropyrimidinase activity [GO:0004157]	1	1	NA
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	1	NA	NA
dioxygenase activity [GO:0051213]	1	NA	NA
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2	NA
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	4	4
dynein complex binding [GO:0070840]	1	NA	NA
dynein intermediate chain binding [GO:0045505]	1	NA	NA
electron transfer activity [GO:0009055]	1	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2	2
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	2	1	NA
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1	NA
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	1	NA	NA
enoyl-CoA hydratase activity [GO:0004300]	1	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1	1
enzyme regulator activity [GO:0030234]	2	2	NA
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	1	NA	NA
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1	1
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1	1
fatty-acyl-CoA binding [GO:0000062]	1	1	1
fatty acid binding [GO:0005504]	1	1	1
FFAT motif binding [GO:0033149]	1	1	1
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1	NA
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1	NA
fructose-bisphosphate aldolase activity [GO:0004332]	1	1	1
fumarate hydratase activity [GO:0004333]	1	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	NA	NA
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	NA	NA
GDP-L-fucose synthase activity [GO:0050577]	1	NA	NA
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	1	1
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	1	NA	NA
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1	NA
glucosylceramidase activity [GO:0004348]	1	NA	NA
glucuronosyltransferase activity [GO:0015020]	1	2	1
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1	1
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	1	NA	NA
glutathione transferase activity [GO:0004364]	7	4	2
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	1	1	NA
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1	NA
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	1	NA
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1	1
glycogen (starch) synthase activity [GO:0004373]	1	1	NA
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1	NA
glycosyltransferase activity [GO:0016757]	1	1	1
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1	NA
GTP binding [GO:0005525]	1	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	5	4	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	NA	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	3	3	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1	NA
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	NA	NA
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1	NA
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1	NA
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	1	NA	NA
guanyl-nucleotide exchange factor activity [GO:0005085]	1	NA	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1	NA
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	1	9	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	NA	NA
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	NA	NA
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	1	NA	NA
Hsp90 protein binding [GO:0051879]	1	NA	1
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	NA	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1	NA
hydrolase activity [GO:0016787]	6	3	1
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1	NA
hydrolase activity, acting on glycosyl bonds [GO:0016798]	1	2	NA
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	1	NA	NA
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	NA	NA
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	1	NA	NA
hydroxypyruvate isomerase activity [GO:0008903]	1	NA	NA
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1	NA
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	1	1
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	1	NA	NA
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1	NA
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2	1
isomerase activity [GO:0016853]	1	1	NA
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	1	NA	NA
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	1	NA	NA
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2	NA
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	1	NA	NA
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1	NA
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1	1
L-malate dehydrogenase activity [GO:0030060]	2	2	2
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1	NA
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3	3
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1	1
lipase activity [GO:0016298]	1	1	1
lipid binding [GO:0008289]	1	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	1	NA
lipid transporter activity [GO:0005319]	2	3	3
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1	1
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	NA	NA
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	1	NA	NA
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	NA	NA
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1	1
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1	NA
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	1	1
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1	NA
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1	NA
metal ion binding [GO:0046872]	4	4	4
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	1	NA	NA
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1	NA
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	3	1	2
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	1	NA
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	1	1	NA
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	1	NA	NA
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1	NA
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	1	2	1
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	1	1	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	NA	NA
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	3	3	1
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	2	2	1
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2	NA
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	4	1	NA
metallodipeptidase activity [GO:0070573]	1	NA	NA
metalloendopeptidase activity [GO:0004222]	1	NA	NA
metallopeptidase activity [GO:0008237]	1	1	NA
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	NA	NA
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1	NA
microtubule binding [GO:0008017]	1	1	1
microtubule plus-end binding [GO:0051010]	1	NA	NA
monooxygenase activity [GO:0004497]	1	1	1
mRNA binding [GO:0003729]	2	2	3
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	1	NA	NA
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1	1
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	2	2	2
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	1	1	1
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	NA	NA
N-acetyltransferase activity [GO:0008080]	1	NA	NA
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1	1
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1	1
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	1	NA
nucleic acid binding [GO:0003676]	1	NA	NA
nucleotide binding [GO:0000166]	2	1	NA
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1	NA
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1	NA
odorant binding [GO:0005549]	4	2	2
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	1	NA	NA
omega-amidase activity [GO:0050152]	1	NA	NA
oxidoreductase activity [GO:0016491]	8	4	2
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	1	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	1	NA
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	2	NA	NA
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1	NA
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1	NA
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1	NA
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	2	1	1
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	1	1	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	1	NA	NA
peptidase activity [GO:0008233]	2	1	1
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1	1
peroxiredoxin activity [GO:0051920]	2	2	1
peroxisome membrane targeting sequence binding [GO:0033328]	1	1	NA
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	NA	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	3	2	NA
phosphomannomutase activity [GO:0004615]	1	NA	NA
phosphoserine residue binding [GO:0050815]	1	1	1
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1	1
protein-containing complex binding [GO:0044877]	1	1	1
protein-disulfide reductase activity [GO:0015035]	1	1	NA
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	1	NA	NA
protein disulfide isomerase activity [GO:0003756]	3	2	2
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1	NA
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1	NA
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1	1
protein phosphatase activator activity [GO:0072542]	1	NA	NA
protein phosphatase regulator activity [GO:0019888]	1	1	NA
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	1	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	5	5	3
proton transmembrane transporter activity [GO:0015078]	4	4	4
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	NA	NA
pyridoxal kinase activity [GO:0008478]	1	NA	NA
pyridoxal phosphate binding [GO:0030170]	1	NA	NA
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1	NA
pyrroline-5-carboxylate reductase activity [GO:0004735]	1	1	NA
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1	NA
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	NA	NA
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	NA	NA
ribonuclease P activity [GO:0004526]	1	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	1	NA
RNA binding [GO:0003723]	6	4	2
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1	1
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	13	14	11
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	1	2	NA
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	1	1
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	1	1	NA
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	2	3	3
S-formylglutathione hydrolase activity [GO:0018738]	1	1	NA
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	1	NA	NA
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	1	NA	NA
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1	NA
scavenger receptor activity [GO:0005044]	1	1	1
selenium binding [GO:0008430]	1	1	NA
serine-type carboxypeptidase activity [GO:0004185]	1	1	NA
serine-type endopeptidase activity [GO:0004252]	12	6	3
serine-type endopeptidase inhibitor activity [GO:0004867]	2	3	1
serine-type peptidase activity [GO:0008236]	1	NA	NA
signaling receptor binding [GO:0005102]	1	1	1
small GTPase binding [GO:0031267]	1	1	NA
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	NA	NA
snoRNA binding [GO:0030515]	1	1	NA
spermidine synthase activity [GO:0004766]	1	NA	NA
spermine synthase activity [GO:0016768]	1	1	NA
sterol binding [GO:0032934]	2	1	NA
strictosidine synthase activity [GO:0016844]	1	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	4	13	21
structural constituent of cytoskeleton [GO:0005200]	1	1	1
structural constituent of ribosome [GO:0003735]	25	23	17
structural molecule activity [GO:0005198]	6	5	NA
sulfotransferase activity [GO:0008146]	1	1	NA
SUMO activating enzyme activity [GO:0019948]	1	NA	NA
thioredoxin peroxidase activity [GO:0008379]	1	1	NA
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	1	1	NA
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	1	NA	NA
translation elongation factor activity [GO:0003746]	2	2	1
trehalose-phosphatase activity [GO:0004805]	1	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	1	NA	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	NA	NA
unfolded protein binding [GO:0051082]	2	1	1
uroporphyrinogen decarboxylase activity [GO:0004853]	1	NA	NA
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1	NA
zinc ion binding [GO:0008270]	2	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	NA	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	NA	1	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	NA	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	NA	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	NA	1	NA
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	NA	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	NA	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	NA	1	NA
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	NA	1	NA
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	NA	1	NA
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	NA	1	NA
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	NA	1	NA
ATP:ADP antiporter activity [GO:0005471]	NA	1	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	NA	1	1
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	NA	1	NA
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]	NA	1	NA
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	NA	1	NA
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	NA	1	NA
carnitine O-palmitoyltransferase activity [GO:0004095]	NA	1	NA
cell-cell adhesion mediator activity [GO:0098632]	NA	1	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	NA	1	NA
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]	NA	1	NA
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]	NA	1	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	NA	1	NA
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1	NA
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	2	NA
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	NA	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	NA	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	NA	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	NA	1	NA
histone binding [GO:0042393]	NA	1	NA
integrin binding [GO:0005178]	NA	1	2
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]	NA	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	NA	1	1
lysozyme activity [GO:0003796]	NA	1	1
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	NA	1	NA
mannose binding [GO:0005537]	NA	1	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	NA	1	NA
phospholipid scramblase activity [GO:0017128]	NA	1	NA
potassium:chloride symporter activity [GO:0015379]	NA	1	NA
protein-arginine N-methyltransferase activity [GO:0016274]	NA	1	NA
protein kinase regulator activity [GO:0019887]	NA	2	NA
protein transmembrane transporter activity [GO:0008320]	NA	1	1
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	NA	1	1
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	NA	1	NA
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	NA	2	2
signaling receptor complex adaptor activity [GO:0030159]	NA	1	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	NA	1	NA
structural constituent of cuticle [GO:0042302]	NA	2	12
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]	NA	1	NA
transmembrane transporter activity [GO:0022857]	NA	1	1
tropomyosin binding [GO:0005523]	NA	1	1
UDP-glycosyltransferase activity [GO:0008194]	NA	3	1
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	NA	NA	1
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	NA	NA	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	NA	NA	1
ATPase activator activity [GO:0001671]	NA	NA	2
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]	NA	NA	1
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	NA	NA	1
cysteine-type peptidase activity [GO:0008234]	NA	NA	1
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	NA	NA	1
DNA binding, bending [GO:0008301]	NA	NA	1
endopeptidase inhibitor activity [GO:0004866]	NA	NA	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	NA	NA	1
GPI anchor binding [GO:0034235]	NA	NA	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	NA	NA	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	NA	NA	1
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	NA	NA	1
metalloexopeptidase activity [GO:0008235]	NA	NA	1
neuropeptide Y receptor activity [GO:0004983]	NA	NA	1

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,2]) == TRUE))

x
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]
alpha-galactosidase activity [GO:0004557]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]
carbohydrate binding [GO:0030246]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chromatin binding [GO:0003682]; histone binding [GO:0042393]
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]
dioxygenase activity [GO:0051213]
dynein complex binding [GO:0070840]
dynein intermediate chain binding [GO:0045505]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP-L-fucose synthase activity [GO:0050577]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucosylceramidase activity [GO:0004348]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]
Hsp90 protein binding [GO:0051879]
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
hydroxypyruvate isomerase activity [GO:0008903]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]
metallodipeptidase activity [GO:0070573]
metalloendopeptidase activity [GO:0004222]
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]
microtubule plus-end binding [GO:0051010]
mRNA binding [GO:0003729]; RNA binding [GO:0003723]
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]
N-acetyltransferase activity [GO:0008080]
nucleic acid binding [GO:0003676]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
omega-amidase activity [GO:0050152]
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]
palmitoyl-(protein) hydrolase activity [GO:0008474]
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]
phosphomannomutase activity [GO:0004615]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein phosphatase activator activity [GO:0072542]
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
pyridoxal kinase activity [GO:0008478]
pyridoxal phosphate binding [GO:0030170]
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]
Rho GDP-dissociation inhibitor activity [GO:0005094]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
serine-type peptidase activity [GO:0008236]
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]
spermidine synthase activity [GO:0004766]
SUMO activating enzyme activity [GO:0019948]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]
uroporphyrinogen decarboxylase activity [GO:0004853]
zinc ion binding [GO:0008270]

kable(subset(BP[,1], is.na(BP[,2]) == TRUE & !is.na(BP[,3]) == TRUE))

x
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]
ATP:ADP antiporter activity [GO:0005471]
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
carnitine O-palmitoyltransferase activity [GO:0004095]
cell-cell adhesion mediator activity [GO:0098632]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]
histone binding [GO:0042393]
integrin binding [GO:0005178]
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]
lysozyme activity [GO:0003796]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
mannose binding [GO:0005537]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
phospholipid scramblase activity [GO:0017128]
potassium:chloride symporter activity [GO:0015379]
protein-arginine N-methyltransferase activity [GO:0016274]
protein kinase regulator activity [GO:0019887]
protein transmembrane transporter activity [GO:0008320]
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]
signaling receptor complex adaptor activity [GO:0030159]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
structural constituent of cuticle [GO:0042302]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]
transmembrane transporter activity [GO:0022857]
tropomyosin binding [GO:0005523]
UDP-glycosyltransferase activity [GO:0008194]

kable(subset(BP[,1], is.na(BP[,4]) == TRUE & !is.na(BP[,3]) == TRUE))

x
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
2-hydroxyglutarate dehydrogenase activity [GO:0047545]
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]
adenosylhomocysteinase activity [GO:0004013]
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
alpha-L-fucosidase activity [GO:0004560]
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
beta-glucosidase activity [GO:0008422]
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]
carbonyl reductase (NADPH) activity [GO:0004090]
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]
chloride channel activity [GO:0005254]
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]
cysteine-type endopeptidase activity [GO:0004197]
deaminase activity [GO:0019239]
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]
dihydropyrimidinase activity [GO:0004157]
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]
enzyme regulator activity [GO:0030234]
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]
glycogen (starch) synthase activity [GO:0004373]
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]
hydrolase activity, acting on glycosyl bonds [GO:0016798]
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]
isomerase activity [GO:0016853]
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]
metallopeptidase activity [GO:0008237]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]
nucleotide binding [GO:0000166]
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]
peroxisome membrane targeting sequence binding [GO:0033328]
phosphatidylinositol bisphosphate binding [GO:1902936]
protein-disulfide reductase activity [GO:0015035]
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]
protein phosphatase regulator activity [GO:0019888]
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]
pyrroline-5-carboxylate reductase activity [GO:0004735]
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]
ribonuclease P activity [GO:0004526]
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-formylglutathione hydrolase activity [GO:0018738]
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]
selenium binding [GO:0008430]
serine-type carboxypeptidase activity [GO:0004185]
small GTPase binding [GO:0031267]
snoRNA binding [GO:0030515]
spermine synthase activity [GO:0016768]
sterol binding [GO:0032934]
structural molecule activity [GO:0005198]
sulfotransferase activity [GO:0008146]
thioredoxin peroxidase activity [GO:0008379]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
carnitine O-palmitoyltransferase activity [GO:0004095]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]
histone binding [GO:0042393]
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
mannose binding [GO:0005537]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
phospholipid scramblase activity [GO:0017128]
potassium:chloride symporter activity [GO:0015379]
protein-arginine N-methyltransferase activity [GO:0016274]
protein kinase regulator activity [GO:0019887]
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,4]) == TRUE))

x
alpha-galactosidase activity [GO:0004557]
carbohydrate binding [GO:0030246]
Hsp90 protein binding [GO:0051879]
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]
ATPase activator activity [GO:0001671]
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
cysteine-type peptidase activity [GO:0008234]
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]
DNA binding, bending [GO:0008301]
endopeptidase inhibitor activity [GO:0004866]
glutaminyl-peptide cyclotransferase activity [GO:0016603]
GPI anchor binding [GO:0034235]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]
metalloexopeptidase activity [GO:0008235]
neuropeptide Y receptor activity [GO:0004983]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
t_BP_sorted_3 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
#results_comp_cc <- c(results_comp_cc,sum(is.na(BP$Freq.x) & !is.na(BP$Freq.y)))
#results_comp_cc <- c(results_comp_cc,sum(is.na(BP$Freq.y) & !is.na(BP$Freq)))
#length_comp_cc <- c(length_comp_cc,length(BP[,1]),length(BP[,1]))
colnames(BP) <- c("Function", "D1","D2","D4")
kable(BP)

Function	D1	D2	D4
6-phosphofructokinase complex [GO:0005945]	1	1	NA
actin cytoskeleton [GO:0015629]; adherens junction [GO:0005912]; cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	2	1	1
actin cytoskeleton [GO:0015629]; cytoplasm [GO:0005737]	2	1	1
actin cytoskeleton [GO:0015629]; nucleus [GO:0005634]; Z disc [GO:0030018]	1	1	1
actin filament [GO:0005884]	1	2	2
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]	1	NA	NA
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]	1	NA	NA
adherens junction [GO:0005912]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1	NA
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1	1
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]	1	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]	1	NA	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]	1	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]	1	NA	NA
AP-2 adaptor complex [GO:0030122]	1	1	NA
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]	1	1	NA
Arp2/3 protein complex [GO:0005885]	1	NA	NA
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]	2	NA	NA
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]	1	1	1
basement membrane [GO:0005604]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	1	1
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]	1	1	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]	1	1	NA
calcineurin complex [GO:0005955]	1	NA	NA
cAMP-dependent protein kinase complex [GO:0005952]	2	1	NA
catenin complex [GO:0016342]	1	NA	NA
cell-cell junction [GO:0005911]; plasma membrane [GO:0005886]	1	1	1
cell cortex [GO:0005938]; clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]; clathrin-coated endocytic vesicle [GO:0045334]	1	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]	1	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	1	1	NA
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]	1	NA	NA
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]	1	1	NA
cell projection [GO:0042995]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1	1
cellular anatomical entity [GO:0110165]	2	NA	NA
chaperonin-containing T-complex [GO:0005832]	4	4	1
chitin-based extracellular matrix [GO:0062129]	4	13	21
chromatin [GO:0000785]; nucleus [GO:0005634]	1	NA	NA
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]	1	1	1
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]	1	1	NA
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]	1	1	1
collagen-containing extracellular matrix [GO:0062023]; extracellular region [GO:0005576]	1	1	NA
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	1	1	NA
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]	2	3	NA
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]	2	NA	NA
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]	1	NA	NA
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]	1	NA	NA
cortical actin cytoskeleton [GO:0030864]	1	1	1
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]	1	NA	NA
cytoplasm [GO:0005737]	72	47	16
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]; microtubule [GO:0005874]	1	NA	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]	1	1	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; myosin complex [GO:0016459]; sarcomere [GO:0030017]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]	2	1	NA
cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]	1	1	NA
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]	1	1	1
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1	1
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1	1
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	1	1	NA
cytoplasm [GO:0005737]; intracellular membrane-bounded organelle [GO:0043231]	1	1	1
cytoplasm [GO:0005737]; lysosome [GO:0005764]	2	NA	1
cytoplasm [GO:0005737]; membrane [GO:0016020]	2	2	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]	1	1	NA
cytoplasm [GO:0005737]; microtubule [GO:0005874]	2	1	1
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]	1	NA	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]	3	1	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]	1	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1	1
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]	1	1	1
cytoplasm [GO:0005737]; myosin II complex [GO:0016460]	1	1	1
cytoplasm [GO:0005737]; nascent polypeptide-associated complex [GO:0005854]	1	1	1
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]	1	NA	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]	7	5	2
cytoplasm [GO:0005737]; nucleus [GO:0005634]; polysome [GO:0005844]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome complex [GO:0000502]	1	NA	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	4	2	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	NA	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	2	2	NA
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	1	1
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]	1	NA	NA
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]	3	3	NA
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1	NA
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]	1	1	NA
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]	1	NA	NA
cytoplasm [GO:0005737]; ribose phosphate diphosphokinase complex [GO:0002189]	1	1	1
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]	1	NA	NA
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]	1	NA	NA
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]	1	NA	NA
cytoskeleton [GO:0005856]; cytosol [GO:0005829]	1	1	1
cytoskeleton [GO:0005856]; membrane [GO:0016020]	1	NA	NA
cytosol [GO:0005829]	35	21	10
cytosol [GO:0005829]; cytosolic small ribosomal subunit [GO:0022627]	1	1	1
cytosol [GO:0005829]; dendrite [GO:0030425]; neuron projection [GO:0043005]; nucleus [GO:0005634]; synapse [GO:0045202]; terminal bouton [GO:0043195]	1	NA	NA
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]	1	1	NA
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1	NA
cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	1	1	NA
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]	1	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]	4	3	1
cytosol [GO:0005829]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1	1
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]	1	1	1
cytosol [GO:0005829]; nuclear envelope [GO:0005635]	1	1	NA
cytosol [GO:0005829]; nucleoplasm [GO:0005654]	1	NA	NA
cytosol [GO:0005829]; nucleus [GO:0005634]	5	2	1
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; ribosome [GO:0005840]	1	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; RISC complex [GO:0016442]	1	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	1	1
cytosol [GO:0005829]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; protein-containing complex [GO:0032991]	1	1	1
cytosolic large ribosomal subunit [GO:0022625]	22	23	15
cytosolic large ribosomal subunit [GO:0022625]; large ribosomal subunit [GO:0015934]	1	1	1
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]	1	1	1
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	1	1	NA
cytosolic small ribosomal subunit [GO:0022627]	10	10	11
cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]	1	2	NA
cytosolic small ribosomal subunit [GO:0022627]; small-subunit processome [GO:0032040]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]; small ribosomal subunit [GO:0015935]	2	2	2
dendrite [GO:0030425]	1	1	NA
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]	1	NA	NA
DNA replication factor A complex [GO:0005662]	1	NA	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]	1	NA	NA
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]	1	1	1
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]	1	1	1
endomembrane system [GO:0012505]	1	1	NA
endomembrane system [GO:0012505]; endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	1	NA	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]	1	1	1
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	1	NA
endoplasmic reticulum [GO:0005783]	2	NA	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]	1	NA	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum lumen [GO:0005788]	3	2	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	1	1	1
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]	1	NA	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]	1	NA	NA
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	1	1	2
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]	1	1	1
endoplasmic reticulum chaperone complex [GO:0034663]	1	1	NA
endoplasmic reticulum lumen [GO:0005788]	3	1	NA
endoplasmic reticulum lumen [GO:0005788]; endoplasmic reticulum membrane [GO:0005789]	1	1	1
endoplasmic reticulum membrane [GO:0005789]	4	6	3
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	NA	NA
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]	1	1	NA
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	1	1	NA
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]	1	1	NA
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]	1	1	1
ESCRT I complex [GO:0000813]; late endosome membrane [GO:0031902]	1	NA	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]	4	3	1
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]	1	1	1
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]	1	NA	NA
eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1	NA
external side of plasma membrane [GO:0009897]	1	NA	1
extracellular region [GO:0005576]	14	12	15
extracellular space [GO:0005615]	13	9	3
extracellular space [GO:0005615]; lysosome [GO:0005764]	11	7	NA
extracellular space [GO:0005615]; membrane [GO:0016020]	1	2	2
extracellular space [GO:0005615]; plasma membrane [GO:0005886]	1	NA	NA
F-actin capping protein complex [GO:0008290]	1	1	NA
glutamate-cysteine ligase complex [GO:0017109]	2	1	NA
glycerol-3-phosphate dehydrogenase complex [GO:0009331]	2	2	2
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1	NA
GMP reductase complex [GO:1902560]	1	1	NA
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	1	1	NA
heterotrimeric G-protein complex [GO:0005834]	1	NA	NA
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]	1	1	1
intracellular membrane-bounded organelle [GO:0043231]	1	1	NA
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]	1	1	1
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]	1	3	NA
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]	1	1	1
intracellular non-membrane-bounded organelle [GO:0043232]	1	1	1
intracellular organelle [GO:0043229]	4	3	1
laminin complex [GO:0043256]	1	1	1
lipid droplet [GO:0005811]; membrane [GO:0016020]	1	2	1
lysosome [GO:0005764]	3	2	NA
lysosome [GO:0005764]; membrane [GO:0016020]	2	NA	NA
mediator complex [GO:0016592]; mitochondrion [GO:0005739]	1	1	1
membrane [GO:0016020]	15	29	20
membrane [GO:0016020]; mitochondrion [GO:0005739]	3	5	3
membrane [GO:0016020]; peroxisome [GO:0005777]	3	2	1
membrane [GO:0016020]; plasma membrane [GO:0005886]	1	3	2
membrane [GO:0016020]; sarcoplasmic reticulum membrane [GO:0033017]	1	1	1
membrane [GO:0016020]; spectrin [GO:0008091]	1	1	1
membrane [GO:0016020]; synapse [GO:0045202]	1	NA	NA
MICOS complex [GO:0061617]	1	2	2
mitochondrial fatty acid beta-oxidation multienzyme complex [GO:0016507]	1	1	1
mitochondrial inner membrane [GO:0005743]	3	7	6
mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]	1	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]	1	1	NA
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]	1	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	NA	NA
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]	1	2	2
mitochondrial intermembrane space [GO:0005758]; respirasome [GO:0070469]	1	1	1
mitochondrial large ribosomal subunit [GO:0005762]	1	1	NA
mitochondrial matrix [GO:0005759]	7	4	3
mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1	1
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]	1	1	NA
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]	1	1	1
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]	1	NA	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	1	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	1	1	1
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]	2	2	2
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	2	2	2
mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1	1
mitochondrial proton-transporting ATP synthase, stator stalk [GO:0000274]	1	1	1
mitochondrial pyruvate dehydrogenase complex [GO:0005967]	1	1	1
mitochondrial respiratory chain complex I [GO:0005747]	9	19	14
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) [GO:0005749]	1	1	1
mitochondrial respiratory chain complex III [GO:0005750]	2	4	4
mitochondrial respiratory chain complex IV [GO:0005751]	5	5	5
mitochondrial ribonuclease P complex [GO:0030678]	1	1	NA
mitochondrial small ribosomal subunit [GO:0005763]	1	NA	NA
mitochondrion [GO:0005739]	32	31	12
mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]	3	3	2
mitochondrion [GO:0005739]; peroxisome [GO:0005777]	6	2	1
mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	NA	NA
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]	1	1	NA
mitochondrion [GO:0005739]; succinate-CoA ligase complex [GO:0042709]	2	2	1
mitochondrion [GO:0005739]; tricarboxylic acid cycle enzyme complex [GO:0045239]	1	1	1
myosin filament [GO:0032982]; myosin II complex [GO:0016460]; sarcomere [GO:0030017]	1	1	1
nucleosome [GO:0000786]; nucleus [GO:0005634]	3	4	4
nucleus [GO:0005634]	8	6	4
nucleus [GO:0005634]; P granule [GO:0043186]	1	NA	NA
nucleus [GO:0005634]; proteasome complex [GO:0000502]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA	1
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]	3	2	NA
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA	NA
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]	1	NA	NA
nucleus [GO:0005634]; site of double-strand break [GO:0035861]	1	NA	NA
nucleus [GO:0005634]; Z disc [GO:0030018]	1	1	1
oligosaccharyltransferase complex [GO:0008250]	3	3	3
P granule [GO:0043186]	1	1	NA
peroxisomal membrane [GO:0005778]	1	1	NA
peroxisome [GO:0005777]	10	6	1
phenylalanine-tRNA ligase complex [GO:0009328]	1	NA	NA
phosphopyruvate hydratase complex [GO:0000015]	1	1	1
plasma membrane [GO:0005886]	4	6	5
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	1	NA	NA
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]	1	1	NA
proteasome regulatory particle [GO:0005838]	1	1	NA
proteasome regulatory particle, lid subcomplex [GO:0008541]	3	2	NA
proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178]	1	1	1
proton-transporting V-type ATPase complex [GO:0033176]	1	1	1
proton-transporting V-type ATPase, V1 domain [GO:0033180]	1	1	1
ribonucleoprotein complex [GO:1990904]	3	2	1
ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	5	5	5
signal peptidase complex [GO:0005787]	1	1	2
translation release factor complex [GO:0018444]	1	1	NA
troponin complex [GO:0005861]	4	5	5
vacuolar proton-transporting V-type ATPase, V1 domain [GO:0000221]	3	3	1
anchoring junction [GO:0070161]; membrane [GO:0016020]	NA	1	NA
axon [GO:0030424]; plasma membrane [GO:0005886]	NA	1	1
basement membrane [GO:0005604]	NA	2	2
basement membrane [GO:0005604]; membrane [GO:0016020]	NA	1	1
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]	NA	1	NA
box H/ACA snoRNP complex [GO:0031429]	NA	1	NA
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	NA	1	NA
cell cortex [GO:0005938]; early endosome [GO:0005769]; perinuclear region of cytoplasm [GO:0048471]	NA	1	NA
chromatin [GO:0000785]; nucleolus [GO:0005730]	NA	1	NA
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]	NA	1	NA
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]	NA	1	1
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	NA	1	NA
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]	NA	1	NA
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]	NA	1	NA
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]	NA	1	1
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]	NA	1	NA
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]	NA	1	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]	NA	1	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]	NA	1	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]	NA	1	NA
cytoplasm [GO:0005737]; myosin complex [GO:0016459]	NA	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]; RZZ complex [GO:1990423]	NA	1	NA
cytoplasm [GO:0005737]; SAM complex [GO:0001401]	NA	1	1
cytoskeleton [GO:0005856]	NA	1	1
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]	NA	1	1
endoplasmic reticulum [GO:0005783]; plasma membrane [GO:0005886]	NA	1	NA
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]	NA	1	1
extracellular matrix [GO:0031012]	NA	3	12
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]	NA	1	1
Golgi stack [GO:0005795]	NA	1	NA
intracellular organelle [GO:0043229]; plasma membrane [GO:0005886]	NA	1	1
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; lysosome [GO:0005764]; membrane raft [GO:0045121]; Ragulator complex [GO:0071986]	NA	1	NA
membrane [GO:0016020]; SAM complex [GO:0001401]	NA	1	1
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]	NA	1	NA
microtubule [GO:0005874]	NA	1	NA
mitochondrial inner membrane [GO:0005743]; nucleus [GO:0005634]	NA	1	1
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]	NA	1	NA
mitochondrial membrane [GO:0031966]	NA	1	NA
mitochondrial outer membrane translocase complex [GO:0005742]	NA	1	1
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]	NA	1	1
recycling endosome membrane [GO:0055038]; trans-Golgi network membrane [GO:0032588]	NA	1	NA
sarcoplasmic reticulum membrane [GO:0033017]	NA	1	NA
SCF ubiquitin ligase complex [GO:0019005]	NA	1	NA
Sec61 translocon complex [GO:0005784]	NA	1	1
SNARE complex [GO:0031201]	NA	1	NA
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]	NA	NA	1
chromosome [GO:0005694]; nucleus [GO:0005634]	NA	NA	1
collagen-containing extracellular matrix [GO:0062023]	NA	NA	1
collagen-containing extracellular matrix [GO:0062023]; extracellular space [GO:0005615]	NA	NA	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]	NA	NA	1
cytoplasmic side of plasma membrane [GO:0009898]; ESCRT III complex [GO:0000815]; multivesicular body [GO:0005771]	NA	NA	1
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]	NA	NA	1
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]	NA	NA	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]	NA	NA	1
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]	NA	NA	1
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]	NA	NA	1
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]	NA	NA	1
sodium:potassium-exchanging ATPase complex [GO:0005890]	NA	NA	2

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,2]) == TRUE))

x
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]
Arp2/3 protein complex [GO:0005885]
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]
calcineurin complex [GO:0005955]
catenin complex [GO:0016342]
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]
cellular anatomical entity [GO:0110165]
chromatin [GO:0000785]; nucleus [GO:0005634]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; lysosome [GO:0005764]
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome complex [GO:0000502]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]
cytoskeleton [GO:0005856]; membrane [GO:0016020]
cytosol [GO:0005829]; dendrite [GO:0030425]; neuron projection [GO:0043005]; nucleus [GO:0005634]; synapse [GO:0045202]; terminal bouton [GO:0043195]
cytosol [GO:0005829]; nucleoplasm [GO:0005654]
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]
DNA replication factor A complex [GO:0005662]
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]
endomembrane system [GO:0012505]; endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]
endoplasmic reticulum [GO:0005783]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
ESCRT I complex [GO:0000813]; late endosome membrane [GO:0031902]
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]
external side of plasma membrane [GO:0009897]
extracellular space [GO:0005615]; plasma membrane [GO:0005886]
heterotrimeric G-protein complex [GO:0005834]
lysosome [GO:0005764]; membrane [GO:0016020]
membrane [GO:0016020]; synapse [GO:0045202]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]
mitochondrial small ribosomal subunit [GO:0005763]
mitochondrion [GO:0005739]; ribosome [GO:0005840]
nucleus [GO:0005634]; P granule [GO:0043186]
nucleus [GO:0005634]; proteasome complex [GO:0000502]; proteasome regulatory particle, lid subcomplex [GO:0008541]
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]
nucleus [GO:0005634]; site of double-strand break [GO:0035861]
phenylalanine-tRNA ligase complex [GO:0009328]
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]

kable(subset(BP[,1], is.na(BP[,2]) == TRUE & !is.na(BP[,3]) == TRUE))

x
anchoring junction [GO:0070161]; membrane [GO:0016020]
axon [GO:0030424]; plasma membrane [GO:0005886]
basement membrane [GO:0005604]
basement membrane [GO:0005604]; membrane [GO:0016020]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]
box H/ACA snoRNP complex [GO:0031429]
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]
cell cortex [GO:0005938]; early endosome [GO:0005769]; perinuclear region of cytoplasm [GO:0048471]
chromatin [GO:0000785]; nucleolus [GO:0005730]
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]
cytoplasm [GO:0005737]; myosin complex [GO:0016459]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; RZZ complex [GO:1990423]
cytoplasm [GO:0005737]; SAM complex [GO:0001401]
cytoskeleton [GO:0005856]
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]
endoplasmic reticulum [GO:0005783]; plasma membrane [GO:0005886]
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]
extracellular matrix [GO:0031012]
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]
Golgi stack [GO:0005795]
intracellular organelle [GO:0043229]; plasma membrane [GO:0005886]
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; lysosome [GO:0005764]; membrane raft [GO:0045121]; Ragulator complex [GO:0071986]
membrane [GO:0016020]; SAM complex [GO:0001401]
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]
microtubule [GO:0005874]
mitochondrial inner membrane [GO:0005743]; nucleus [GO:0005634]
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]
mitochondrial membrane [GO:0031966]
mitochondrial outer membrane translocase complex [GO:0005742]
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]
recycling endosome membrane [GO:0055038]; trans-Golgi network membrane [GO:0032588]
sarcoplasmic reticulum membrane [GO:0033017]
SCF ubiquitin ligase complex [GO:0019005]
Sec61 translocon complex [GO:0005784]
SNARE complex [GO:0031201]

kable(subset(BP[,1], is.na(BP[,4]) == TRUE & !is.na(BP[,3]) == TRUE))

x
6-phosphofructokinase complex [GO:0005945]
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]
AP-2 adaptor complex [GO:0030122]
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]
cAMP-dependent protein kinase complex [GO:0005952]
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]
collagen-containing extracellular matrix [GO:0062023]; extracellular region [GO:0005576]
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]
cytoplasm [GO:0005737]; cytosol [GO:0005829]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]
cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]
cytosol [GO:0005829]; nuclear envelope [GO:0005635]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]
dendrite [GO:0030425]
endomembrane system [GO:0012505]
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum chaperone complex [GO:0034663]
endoplasmic reticulum lumen [GO:0005788]
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]
eukaryotic translation elongation factor 1 complex [GO:0005853]
extracellular space [GO:0005615]; lysosome [GO:0005764]
F-actin capping protein complex [GO:0008290]
glutamate-cysteine ligase complex [GO:0017109]
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]
GMP reductase complex [GO:1902560]
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]
intracellular membrane-bounded organelle [GO:0043231]
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]
lysosome [GO:0005764]
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]
mitochondrial large ribosomal subunit [GO:0005762]
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]
mitochondrial ribonuclease P complex [GO:0030678]
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]
P granule [GO:0043186]
peroxisomal membrane [GO:0005778]
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]
proteasome regulatory particle [GO:0005838]
proteasome regulatory particle, lid subcomplex [GO:0008541]
translation release factor complex [GO:0018444]
anchoring junction [GO:0070161]; membrane [GO:0016020]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]
box H/ACA snoRNP complex [GO:0031429]
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]
cell cortex [GO:0005938]; early endosome [GO:0005769]; perinuclear region of cytoplasm [GO:0048471]
chromatin [GO:0000785]; nucleolus [GO:0005730]
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]
cytoplasm [GO:0005737]; myosin complex [GO:0016459]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; RZZ complex [GO:1990423]
endoplasmic reticulum [GO:0005783]; plasma membrane [GO:0005886]
Golgi stack [GO:0005795]
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; lysosome [GO:0005764]; membrane raft [GO:0045121]; Ragulator complex [GO:0071986]
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]
microtubule [GO:0005874]
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]
mitochondrial membrane [GO:0031966]
recycling endosome membrane [GO:0055038]; trans-Golgi network membrane [GO:0032588]
sarcoplasmic reticulum membrane [GO:0033017]
SCF ubiquitin ligase complex [GO:0019005]
SNARE complex [GO:0031201]

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,4]) == TRUE))

x
cytoplasm [GO:0005737]; lysosome [GO:0005764]
external side of plasma membrane [GO:0009897]
nucleus [GO:0005634]; proteasome complex [GO:0000502]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]
chromosome [GO:0005694]; nucleus [GO:0005634]
collagen-containing extracellular matrix [GO:0062023]
collagen-containing extracellular matrix [GO:0062023]; extracellular space [GO:0005615]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]
cytoplasmic side of plasma membrane [GO:0009898]; ESCRT III complex [GO:0000815]; multivesicular body [GO:0005771]
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]
sodium:potassium-exchanging ATPase complex [GO:0005890]

4.3 C

#D1_uni <- GetProteinGOInfo(D1)
#saveRDS(D1_uni,"./go_terms/graph2_E4_uni.RDS")
GO_1 <- readRDS("./go_terms/graph2_E4_uni.RDS")
#D2_uni <- GetProteinGOInfo(D2)
#saveRDS(D2_uni,"./go_terms/graph2_E5_uni.RDS")
GO_2 <- readRDS("./go_terms/graph2_E5_uni.RDS")

################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp <- c(results_comp, tmp/(length(BP[,1])))
name_comp <- c(name_comp,"graph2C-2D+3D","graph2C-only2D","graph2C-only3D")
colnames(BP) <- c("Function", "2D","3D")
kable(BP)

Function	2D	3D
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	1	1
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	NA
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	1
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	1
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	1
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	1	1
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	NA
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	1	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	2	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	1	1
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	3
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	1
actin binding [GO:0003779]	2	3
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	2	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	7	9
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin monomer binding [GO:0003785]	2	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	1	2
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	1	2
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	1	2
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	3	3
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	2
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	1	3
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1
alkaline phosphatase activity [GO:0004035]	1	1
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	1	3
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	2
alpha-L-fucosidase activity [GO:0004560]	2	3
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	1	1
alpha,alpha-trehalase activity [GO:0004555]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	1
aminoacylase activity [GO:0004046]	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1
amyloid-beta binding [GO:0001540]	1	NA
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	1
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	1
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
arylformamidase activity [GO:0004061]	1	1
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	7	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	2	1
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	1	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	1
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	1
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	1	1
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	3	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	1	1
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	2	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	1
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	1
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	1
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase activator activity [GO:0001671]	1	2
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	1	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
beta-glucosidase activity [GO:0008422]	1	1
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	1	2
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	1
calcium ion binding [GO:0005509]	12	14
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	4
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	1	1
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	2
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	1	2
carbohydrate binding [GO:0030246]	3	2
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	1
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	2
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	1
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	1
carnitine O-palmitoyltransferase activity [GO:0004095]	1	1
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
cell-cell adhesion mediator activity [GO:0098632]	1	1
cell adhesion molecule binding [GO:0050839]	2	2
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	1
chitin binding [GO:0008061]	3	5
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	4	3
chloride channel activity [GO:0005254]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	1	1
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	2	2
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	1
citrate secondary active transmembrane transporter activity [GO:0071913]	1	1
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	1	1
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	2	4
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	1	3
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	1
cysteine-type endopeptidase activity [GO:0004197]	5	8
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
cysteine-type peptidase activity [GO:0008234]	1	1
deaminase activity [GO:0019239]	1	1
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	1	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	1
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	1	1
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA
dioxygenase activity [GO:0051213]	1	1
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	1	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	NA
DNA binding [GO:0003677]; metal ion binding [GO:0046872]	1	NA
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	4
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	NA
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	NA
dynein complex binding [GO:0070840]	1	1
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	2
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme regulator activity [GO:0030234]	2	2
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	1	1
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	1
FFAT motif binding [GO:0033149]	1	1
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	NA
gap junction channel activity [GO:0005243]	1	1
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	2
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1
glucuronosyltransferase activity [GO:0015020]	3	2
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1
glutathione transferase activity [GO:0004364]	6	7
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	NA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	1	1
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	2
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosyltransferase activity [GO:0016757]	1	1
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1
GPI anchor binding [GO:0034235]	1	1
GTP binding [GO:0005525]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	6	6
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	3	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	1
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	9
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	1
histone binding [GO:0042393]	1	1
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	1
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	1	1
Hsp90 protein binding [GO:0051879]	1	1
hydro-lyase activity [GO:0016836]	1	NA
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	8	7
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on ester bonds [GO:0016788]	1	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	2	2
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1
hydroxypyruvate isomerase activity [GO:0008903]	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	1
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	1
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1
integrin binding [GO:0005178]	2	2
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	1
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-malate dehydrogenase activity [GO:0030060]	2	2
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]	1	NA
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	2	1
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	1
lipid transporter activity [GO:0005319]	3	3
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1
lysozyme activity [GO:0003796]	1	1
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	1
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	3
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
mannose binding [GO:0005537]	1	1
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1
metal ion binding [GO:0046872]	4	4
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	3	4
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	1
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	1	1
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	2
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	1	3
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	NA
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	2	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	2	4
metallodipeptidase activity [GO:0070573]	1	1
metalloexopeptidase activity [GO:0008235]	1	1
metallopeptidase activity [GO:0008237]	1	1
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1
microtubule binding [GO:0008017]	1	1
microtubule plus-end binding [GO:0051010]	1	1
monooxygenase activity [GO:0004497]	1	1
mRNA binding [GO:0003729]	1	2
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	1
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	3	3
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	1	1
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1
N-acetyltransferase activity [GO:0008080]	1	1
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]	1	1
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
neuropeptide Y receptor activity [GO:0004983]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	1
nucleic acid binding [GO:0003676]	2	1
nucleotide binding [GO:0000166]	2	2
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
odorant binding [GO:0005549]	3	4
omega-amidase activity [GO:0050152]	1	1
oxidoreductase activity [GO:0016491]	7	9
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	1
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	1	2
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	3	2
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	1	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	1	1
peptidase activity [GO:0008233]	2	2
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
peroxiredoxin activity [GO:0051920]	2	2
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	1
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]	1	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	3	3
phosphoserine residue binding [GO:0050815]	1	1
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA
potassium:chloride symporter activity [GO:0015379]	1	1
protein-arginine N-methyltransferase activity [GO:0016274]	1	1
protein-containing complex binding [GO:0044877]	1	1
protein-disulfide reductase activity [GO:0015035]	1	1
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA
protein disulfide isomerase activity [GO:0003756]	3	3
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein kinase regulator activity [GO:0019887]	1	2
protein phosphatase regulator activity [GO:0019888]	1	1
protein serine/threonine kinase activator activity [GO:0043539]	1	NA
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	1	1
protein transmembrane transporter activity [GO:0008320]	1	1
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	5	5
proton transmembrane transporter activity [GO:0015078]	4	4
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	1
pyridoxal phosphate binding [GO:0030170]	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	1
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	2
RNA binding [GO:0003723]	4	8
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	16	15
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	1	2
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	2
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	3
S-formylglutathione hydrolase activity [GO:0018738]	1	1
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
scavenger receptor activity [GO:0005044]	1	1
selenium binding [GO:0008430]	1	1
serine-type carboxypeptidase activity [GO:0004185]	1	1
serine-type endopeptidase activity [GO:0004252]	9	13
serine-type endopeptidase inhibitor activity [GO:0004867]	3	3
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	2
signaling receptor binding [GO:0005102]	1	2
signaling receptor complex adaptor activity [GO:0030159]	1	1
small GTPase binding [GO:0031267]	1	1
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	1
snoRNA binding [GO:0030515]	2	1
spermine synthase activity [GO:0016768]	1	1
sterol binding [GO:0032934]	1	2
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	13	22
structural constituent of cuticle [GO:0042302]	8	13
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	26	25
structural molecule activity [GO:0005198]	6	7
sulfotransferase activity [GO:0008146]	1	1
sulfuric ester hydrolase activity [GO:0008484]	1	NA
thioredoxin peroxidase activity [GO:0008379]	1	1
translation elongation factor activity [GO:0003746]	2	2
transmembrane transporter activity [GO:0022857]	1	1
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
tropomyosin binding [GO:0005523]	1	1
ubiquitin binding [GO:0043130]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1
UDP-glycosyltransferase activity [GO:0008194]	3	3
unfolded protein binding [GO:0051082]	2	2
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	NA	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	NA	1
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	NA	1
6-phosphogluconolactonase activity [GO:0017057]	NA	1
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	NA	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	NA	1
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	NA	1
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	NA	2
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	NA	1
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	NA	1
amino acid kinase activity [GO:0019202]	NA	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	NA	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	NA	1
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	NA	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	NA	1
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]	NA	1
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	NA	1
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	NA	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	NA	1
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	NA	1
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	NA	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	NA	1
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	NA	1
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]	NA	1
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	NA	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	NA	1
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	NA	1
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	NA	1
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	NA	1
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	NA	1
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]	NA	1
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	NA	1
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]	NA	1
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	NA	1
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	NA	1
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]	NA	1
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]	NA	1
cystathionine beta-synthase activity [GO:0004122]	NA	1
cysteine-type deubiquitinase activity [GO:0004843]	NA	1
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]	NA	1
D-ribulokinase activity [GO:0019150]	NA	1
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	NA	1
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]	NA	1
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	NA	1
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	NA	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	NA	1
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]	NA	1
dynein intermediate chain binding [GO:0045505]	NA	1
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]	NA	1
endopeptidase inhibitor activity [GO:0004866]	NA	1
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	NA	1
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	NA	1
fatty acid binding [GO:0005504]	NA	1
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1
GDP-L-fucose synthase activity [GO:0050577]	NA	1
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	NA	1
glucosylceramidase activity [GO:0004348]	NA	1
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	NA	1
glycogen (starch) synthase activity [GO:0004373]	NA	1
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	NA	1
guanyl-nucleotide exchange factor activity [GO:0005085]	NA	1
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	NA	1
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	NA	1
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	NA	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	NA	1
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]	NA	1
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	NA	1
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	NA	1
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	NA	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	NA	1
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	NA	1
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	NA	1
metalloendopeptidase activity [GO:0004222]	NA	1
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	NA	1
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	NA	1
peroxisome membrane targeting sequence binding [GO:0033328]	NA	1
phospholipid scramblase activity [GO:0017128]	NA	1
phosphomannomutase activity [GO:0004615]	NA	1
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	NA	1
protein phosphatase activator activity [GO:0072542]	NA	1
pyridoxal kinase activity [GO:0008478]	NA	1
pyrroline-5-carboxylate reductase activity [GO:0004735]	NA	1
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	NA	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	NA	1
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	NA	1
serine-type peptidase activity [GO:0008236]	NA	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	NA	1
spermidine synthase activity [GO:0004766]	NA	1
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]	NA	1
SUMO activating enzyme activity [GO:0019948]	NA	1
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	NA	1
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	NA	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	NA	1
uroporphyrinogen decarboxylase activity [GO:0004853]	NA	1
zinc ion binding [GO:0008270]	NA	2

kable(BP[is.na(BP[,3])==TRUE,1])

x
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
alpha,alpha-trehalase activity [GO:0004555]
amyloid-beta binding [GO:0001540]
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]
DNA binding [GO:0003677]; metal ion binding [GO:0046872]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
hydro-lyase activity [GO:0016836]
hydrolase activity, acting on ester bonds [GO:0016788]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
ligase activity [GO:0016874]
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein serine/threonine kinase activator activity [GO:0043539]
ribose-5-phosphate isomerase activity [GO:0004751]
sulfuric ester hydrolase activity [GO:0008484]
ubiquitin binding [GO:0043130]

kable(BP[is.na(BP[,2])==TRUE,1])

x
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]
dynein intermediate chain binding [GO:0045505]
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]
endopeptidase inhibitor activity [GO:0004866]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
fatty acid binding [GO:0005504]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP-L-fucose synthase activity [GO:0050577]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucosylceramidase activity [GO:0004348]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glycogen (starch) synthase activity [GO:0004373]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metalloendopeptidase activity [GO:0004222]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
peroxisome membrane targeting sequence binding [GO:0033328]
phospholipid scramblase activity [GO:0017128]
phosphomannomutase activity [GO:0004615]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein phosphatase activator activity [GO:0072542]
pyridoxal kinase activity [GO:0008478]
pyrroline-5-carboxylate reductase activity [GO:0004735]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
serine-type peptidase activity [GO:0008236]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
spermidine synthase activity [GO:0004766]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]
SUMO activating enzyme activity [GO:0019948]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
uroporphyrinogen decarboxylase activity [GO:0004853]
zinc ion binding [GO:0008270]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_cc <- c(results_comp_cc, tmp/(length(BP[,1])))
name_comp_cc <- c(name_comp_cc,"graph2C-2D+3D","graph2C-only2D","graph2C-only3D")
colnames(BP) <- c("Function", "E4","E5")
kable(BP)

Function	E4	E5
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	1	1
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	NA
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	1
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	1
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	1
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	1	1
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	NA
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	1	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	2	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	1	1
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	3
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	1
actin binding [GO:0003779]	2	3
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	2	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	7	9
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin monomer binding [GO:0003785]	2	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	1	2
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	1	2
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	1	2
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	3	3
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	2
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	1	3
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1
alkaline phosphatase activity [GO:0004035]	1	1
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	1	3
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	2
alpha-L-fucosidase activity [GO:0004560]	2	3
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	1	1
alpha,alpha-trehalase activity [GO:0004555]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	1
aminoacylase activity [GO:0004046]	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1
amyloid-beta binding [GO:0001540]	1	NA
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	1
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	1
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
arylformamidase activity [GO:0004061]	1	1
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	7	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	2	1
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	1	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	1
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	1
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	1	1
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	3	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	1	1
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	2	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	1
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	1
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	1
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase activator activity [GO:0001671]	1	2
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	1	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
beta-glucosidase activity [GO:0008422]	1	1
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	1	2
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	1
calcium ion binding [GO:0005509]	12	14
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	4
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	1	1
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	2
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	1	2
carbohydrate binding [GO:0030246]	3	2
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	1
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	2
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	1
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	1
carnitine O-palmitoyltransferase activity [GO:0004095]	1	1
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
cell-cell adhesion mediator activity [GO:0098632]	1	1
cell adhesion molecule binding [GO:0050839]	2	2
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	1
chitin binding [GO:0008061]	3	5
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	4	3
chloride channel activity [GO:0005254]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	1	1
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	2	2
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	1
citrate secondary active transmembrane transporter activity [GO:0071913]	1	1
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	1	1
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	2	4
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	1	3
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	1
cysteine-type endopeptidase activity [GO:0004197]	5	8
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
cysteine-type peptidase activity [GO:0008234]	1	1
deaminase activity [GO:0019239]	1	1
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	1	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	1
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	1	1
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA
dioxygenase activity [GO:0051213]	1	1
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	1	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	NA
DNA binding [GO:0003677]; metal ion binding [GO:0046872]	1	NA
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	4
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	NA
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	NA
dynein complex binding [GO:0070840]	1	1
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	2
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme regulator activity [GO:0030234]	2	2
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	1	1
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	1
FFAT motif binding [GO:0033149]	1	1
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	NA
gap junction channel activity [GO:0005243]	1	1
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	2
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1
glucuronosyltransferase activity [GO:0015020]	3	2
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1
glutathione transferase activity [GO:0004364]	6	7
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	NA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	1	1
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	2
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosyltransferase activity [GO:0016757]	1	1
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1
GPI anchor binding [GO:0034235]	1	1
GTP binding [GO:0005525]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	6	6
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	3	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	1
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	9
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	1
histone binding [GO:0042393]	1	1
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	1
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	1	1
Hsp90 protein binding [GO:0051879]	1	1
hydro-lyase activity [GO:0016836]	1	NA
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	8	7
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on ester bonds [GO:0016788]	1	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	2	2
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1
hydroxypyruvate isomerase activity [GO:0008903]	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	1
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	1
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1
integrin binding [GO:0005178]	2	2
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	1
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-malate dehydrogenase activity [GO:0030060]	2	2
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]	1	NA
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	2	1
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	1
lipid transporter activity [GO:0005319]	3	3
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1
lysozyme activity [GO:0003796]	1	1
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	1
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	3
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
mannose binding [GO:0005537]	1	1
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1
metal ion binding [GO:0046872]	4	4
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	3	4
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	1
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	1	1
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	2
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	1	3
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	NA
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	2	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	2	4
metallodipeptidase activity [GO:0070573]	1	1
metalloexopeptidase activity [GO:0008235]	1	1
metallopeptidase activity [GO:0008237]	1	1
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1
microtubule binding [GO:0008017]	1	1
microtubule plus-end binding [GO:0051010]	1	1
monooxygenase activity [GO:0004497]	1	1
mRNA binding [GO:0003729]	1	2
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	1
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	3	3
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	1	1
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1
N-acetyltransferase activity [GO:0008080]	1	1
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]	1	1
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
neuropeptide Y receptor activity [GO:0004983]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	1
nucleic acid binding [GO:0003676]	2	1
nucleotide binding [GO:0000166]	2	2
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
odorant binding [GO:0005549]	3	4
omega-amidase activity [GO:0050152]	1	1
oxidoreductase activity [GO:0016491]	7	9
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	1
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	1	2
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	3	2
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	1	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	1	1
peptidase activity [GO:0008233]	2	2
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
peroxiredoxin activity [GO:0051920]	2	2
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	1
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]	1	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	3	3
phosphoserine residue binding [GO:0050815]	1	1
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA
potassium:chloride symporter activity [GO:0015379]	1	1
protein-arginine N-methyltransferase activity [GO:0016274]	1	1
protein-containing complex binding [GO:0044877]	1	1
protein-disulfide reductase activity [GO:0015035]	1	1
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA
protein disulfide isomerase activity [GO:0003756]	3	3
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein kinase regulator activity [GO:0019887]	1	2
protein phosphatase regulator activity [GO:0019888]	1	1
protein serine/threonine kinase activator activity [GO:0043539]	1	NA
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	1	1
protein transmembrane transporter activity [GO:0008320]	1	1
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	5	5
proton transmembrane transporter activity [GO:0015078]	4	4
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	1
pyridoxal phosphate binding [GO:0030170]	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	1
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	2
RNA binding [GO:0003723]	4	8
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	16	15
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	1	2
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	2
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	3
S-formylglutathione hydrolase activity [GO:0018738]	1	1
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
scavenger receptor activity [GO:0005044]	1	1
selenium binding [GO:0008430]	1	1
serine-type carboxypeptidase activity [GO:0004185]	1	1
serine-type endopeptidase activity [GO:0004252]	9	13
serine-type endopeptidase inhibitor activity [GO:0004867]	3	3
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	2
signaling receptor binding [GO:0005102]	1	2
signaling receptor complex adaptor activity [GO:0030159]	1	1
small GTPase binding [GO:0031267]	1	1
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	1
snoRNA binding [GO:0030515]	2	1
spermine synthase activity [GO:0016768]	1	1
sterol binding [GO:0032934]	1	2
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	13	22
structural constituent of cuticle [GO:0042302]	8	13
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	26	25
structural molecule activity [GO:0005198]	6	7
sulfotransferase activity [GO:0008146]	1	1
sulfuric ester hydrolase activity [GO:0008484]	1	NA
thioredoxin peroxidase activity [GO:0008379]	1	1
translation elongation factor activity [GO:0003746]	2	2
transmembrane transporter activity [GO:0022857]	1	1
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
tropomyosin binding [GO:0005523]	1	1
ubiquitin binding [GO:0043130]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1
UDP-glycosyltransferase activity [GO:0008194]	3	3
unfolded protein binding [GO:0051082]	2	2
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	NA	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	NA	1
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	NA	1
6-phosphogluconolactonase activity [GO:0017057]	NA	1
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	NA	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	NA	1
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	NA	1
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	NA	2
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	NA	1
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	NA	1
amino acid kinase activity [GO:0019202]	NA	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	NA	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	NA	1
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	NA	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	NA	1
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]	NA	1
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	NA	1
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	NA	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	NA	1
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	NA	1
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	NA	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	NA	1
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	NA	1
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]	NA	1
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	NA	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	NA	1
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	NA	1
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	NA	1
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	NA	1
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	NA	1
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]	NA	1
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	NA	1
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]	NA	1
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	NA	1
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	NA	1
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]	NA	1
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]	NA	1
cystathionine beta-synthase activity [GO:0004122]	NA	1
cysteine-type deubiquitinase activity [GO:0004843]	NA	1
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]	NA	1
D-ribulokinase activity [GO:0019150]	NA	1
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	NA	1
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]	NA	1
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	NA	1
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	NA	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	NA	1
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]	NA	1
dynein intermediate chain binding [GO:0045505]	NA	1
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]	NA	1
endopeptidase inhibitor activity [GO:0004866]	NA	1
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	NA	1
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	NA	1
fatty acid binding [GO:0005504]	NA	1
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1
GDP-L-fucose synthase activity [GO:0050577]	NA	1
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	NA	1
glucosylceramidase activity [GO:0004348]	NA	1
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	NA	1
glycogen (starch) synthase activity [GO:0004373]	NA	1
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	NA	1
guanyl-nucleotide exchange factor activity [GO:0005085]	NA	1
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	NA	1
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	NA	1
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	NA	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	NA	1
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]	NA	1
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	NA	1
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	NA	1
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	NA	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	NA	1
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	NA	1
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	NA	1
metalloendopeptidase activity [GO:0004222]	NA	1
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	NA	1
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	NA	1
peroxisome membrane targeting sequence binding [GO:0033328]	NA	1
phospholipid scramblase activity [GO:0017128]	NA	1
phosphomannomutase activity [GO:0004615]	NA	1
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	NA	1
protein phosphatase activator activity [GO:0072542]	NA	1
pyridoxal kinase activity [GO:0008478]	NA	1
pyrroline-5-carboxylate reductase activity [GO:0004735]	NA	1
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	NA	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	NA	1
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	NA	1
serine-type peptidase activity [GO:0008236]	NA	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	NA	1
spermidine synthase activity [GO:0004766]	NA	1
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]	NA	1
SUMO activating enzyme activity [GO:0019948]	NA	1
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	NA	1
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	NA	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	NA	1
uroporphyrinogen decarboxylase activity [GO:0004853]	NA	1
zinc ion binding [GO:0008270]	NA	2

kable(BP[is.na(BP[,3])==TRUE,1])

x
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
alpha,alpha-trehalase activity [GO:0004555]
amyloid-beta binding [GO:0001540]
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]
DNA binding [GO:0003677]; metal ion binding [GO:0046872]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
hydro-lyase activity [GO:0016836]
hydrolase activity, acting on ester bonds [GO:0016788]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
ligase activity [GO:0016874]
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein serine/threonine kinase activator activity [GO:0043539]
ribose-5-phosphate isomerase activity [GO:0004751]
sulfuric ester hydrolase activity [GO:0008484]
ubiquitin binding [GO:0043130]

kable(BP[is.na(BP[,2])==TRUE,1])

x
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]
dynein intermediate chain binding [GO:0045505]
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]
endopeptidase inhibitor activity [GO:0004866]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
fatty acid binding [GO:0005504]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP-L-fucose synthase activity [GO:0050577]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucosylceramidase activity [GO:0004348]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glycogen (starch) synthase activity [GO:0004373]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metalloendopeptidase activity [GO:0004222]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
peroxisome membrane targeting sequence binding [GO:0033328]
phospholipid scramblase activity [GO:0017128]
phosphomannomutase activity [GO:0004615]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein phosphatase activator activity [GO:0072542]
pyridoxal kinase activity [GO:0008478]
pyrroline-5-carboxylate reductase activity [GO:0004735]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
serine-type peptidase activity [GO:0008236]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
spermidine synthase activity [GO:0004766]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]
SUMO activating enzyme activity [GO:0019948]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
uroporphyrinogen decarboxylase activity [GO:0004853]
zinc ion binding [GO:0008270]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..biological.process.))
t_BP_sorted <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..biological.process.))
t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_bp <- c(results_comp_bp, tmp/(length(BP[,1])))
name_comp_bp <- c(name_comp_bp,"graph2C-2D+3D","graph2C-only2D","graph2C-only3D")
colnames(BP) <- c("Function", "E4","E5")
kable(BP)

Function	E4	E5
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	1	1
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	NA
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	1
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	1
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	1
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	1	1
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	NA
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	1	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	2	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	1	1
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	3
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	1
actin binding [GO:0003779]	2	3
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	2	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	7	9
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin monomer binding [GO:0003785]	2	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	1	2
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	1	2
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	1	2
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	3	3
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	2
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	1	3
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1
alkaline phosphatase activity [GO:0004035]	1	1
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	1	3
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	2
alpha-L-fucosidase activity [GO:0004560]	2	3
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	1	1
alpha,alpha-trehalase activity [GO:0004555]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	1
aminoacylase activity [GO:0004046]	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1
amyloid-beta binding [GO:0001540]	1	NA
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	1
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	1
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
arylformamidase activity [GO:0004061]	1	1
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	7	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	2	1
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	1	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	1
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	1
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	1	1
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	3	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	1	1
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	2	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	1
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	1
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	1
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase activator activity [GO:0001671]	1	2
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	1	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
beta-glucosidase activity [GO:0008422]	1	1
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	1	2
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	1
calcium ion binding [GO:0005509]	12	14
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	4
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	1	1
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	2
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	1	2
carbohydrate binding [GO:0030246]	3	2
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	1
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	2
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	1
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	1
carnitine O-palmitoyltransferase activity [GO:0004095]	1	1
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
cell-cell adhesion mediator activity [GO:0098632]	1	1
cell adhesion molecule binding [GO:0050839]	2	2
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	1
chitin binding [GO:0008061]	3	5
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	4	3
chloride channel activity [GO:0005254]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]	1	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	1	1
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	2	2
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	1
citrate secondary active transmembrane transporter activity [GO:0071913]	1	1
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	1	1
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	2	4
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	1	3
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	1
cysteine-type endopeptidase activity [GO:0004197]	5	8
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
cysteine-type peptidase activity [GO:0008234]	1	1
deaminase activity [GO:0019239]	1	1
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	1	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	1
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	1	1
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA
dioxygenase activity [GO:0051213]	1	1
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	1	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	NA
DNA binding [GO:0003677]; metal ion binding [GO:0046872]	1	NA
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	4
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	NA
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	NA
dynein complex binding [GO:0070840]	1	1
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	2
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme regulator activity [GO:0030234]	2	2
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	1	1
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	1
FFAT motif binding [GO:0033149]	1	1
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	NA
gap junction channel activity [GO:0005243]	1	1
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	2
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1
glucuronosyltransferase activity [GO:0015020]	3	2
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1
glutathione transferase activity [GO:0004364]	6	7
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	NA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	1	1
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	2
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosyltransferase activity [GO:0016757]	1	1
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1
GPI anchor binding [GO:0034235]	1	1
GTP binding [GO:0005525]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	6	6
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	3	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	1
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	9
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	1
histone binding [GO:0042393]	1	1
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	1
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	1	1
Hsp90 protein binding [GO:0051879]	1	1
hydro-lyase activity [GO:0016836]	1	NA
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	8	7
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on ester bonds [GO:0016788]	1	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	2	2
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1
hydroxypyruvate isomerase activity [GO:0008903]	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	1
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	1
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1
integrin binding [GO:0005178]	2	2
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	1
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-malate dehydrogenase activity [GO:0030060]	2	2
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]	1	NA
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	2	1
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	1
lipid transporter activity [GO:0005319]	3	3
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	1	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1
lysozyme activity [GO:0003796]	1	1
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	1
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	3
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
mannose binding [GO:0005537]	1	1
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1
metal ion binding [GO:0046872]	4	4
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	3	4
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	1
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	1	1
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	2
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	1	3
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	NA
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	2	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	2	4
metallodipeptidase activity [GO:0070573]	1	1
metalloexopeptidase activity [GO:0008235]	1	1
metallopeptidase activity [GO:0008237]	1	1
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1
microtubule binding [GO:0008017]	1	1
microtubule plus-end binding [GO:0051010]	1	1
monooxygenase activity [GO:0004497]	1	1
mRNA binding [GO:0003729]	1	2
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	1
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	3	3
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	1	1
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1
N-acetyltransferase activity [GO:0008080]	1	1
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]	1	1
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
neuropeptide Y receptor activity [GO:0004983]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	1	1
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	1
nucleic acid binding [GO:0003676]	2	1
nucleotide binding [GO:0000166]	2	2
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
odorant binding [GO:0005549]	3	4
omega-amidase activity [GO:0050152]	1	1
oxidoreductase activity [GO:0016491]	7	9
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	1
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	1
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	1	2
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	3	2
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	1	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	1	1
peptidase activity [GO:0008233]	2	2
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
peroxiredoxin activity [GO:0051920]	2	2
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	1
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]	1	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	3	3
phosphoserine residue binding [GO:0050815]	1	1
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA
potassium:chloride symporter activity [GO:0015379]	1	1
protein-arginine N-methyltransferase activity [GO:0016274]	1	1
protein-containing complex binding [GO:0044877]	1	1
protein-disulfide reductase activity [GO:0015035]	1	1
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA
protein disulfide isomerase activity [GO:0003756]	3	3
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein kinase regulator activity [GO:0019887]	1	2
protein phosphatase regulator activity [GO:0019888]	1	1
protein serine/threonine kinase activator activity [GO:0043539]	1	NA
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	1	1
protein transmembrane transporter activity [GO:0008320]	1	1
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	5	5
proton transmembrane transporter activity [GO:0015078]	4	4
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	1
pyridoxal phosphate binding [GO:0030170]	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	1
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	2
RNA binding [GO:0003723]	4	8
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	16	15
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	1	2
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	2
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	3
S-formylglutathione hydrolase activity [GO:0018738]	1	1
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
scavenger receptor activity [GO:0005044]	1	1
selenium binding [GO:0008430]	1	1
serine-type carboxypeptidase activity [GO:0004185]	1	1
serine-type endopeptidase activity [GO:0004252]	9	13
serine-type endopeptidase inhibitor activity [GO:0004867]	3	3
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	2
signaling receptor binding [GO:0005102]	1	2
signaling receptor complex adaptor activity [GO:0030159]	1	1
small GTPase binding [GO:0031267]	1	1
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	1
snoRNA binding [GO:0030515]	2	1
spermine synthase activity [GO:0016768]	1	1
sterol binding [GO:0032934]	1	2
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	13	22
structural constituent of cuticle [GO:0042302]	8	13
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	26	25
structural molecule activity [GO:0005198]	6	7
sulfotransferase activity [GO:0008146]	1	1
sulfuric ester hydrolase activity [GO:0008484]	1	NA
thioredoxin peroxidase activity [GO:0008379]	1	1
translation elongation factor activity [GO:0003746]	2	2
transmembrane transporter activity [GO:0022857]	1	1
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
tropomyosin binding [GO:0005523]	1	1
ubiquitin binding [GO:0043130]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1
UDP-glycosyltransferase activity [GO:0008194]	3	3
unfolded protein binding [GO:0051082]	2	2
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	NA	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	NA	1
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	NA	1
6-phosphogluconolactonase activity [GO:0017057]	NA	1
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	NA	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	NA	1
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	NA	1
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	NA	2
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	NA	1
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	NA	1
amino acid kinase activity [GO:0019202]	NA	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	NA	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	NA	1
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	NA	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	NA	1
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]	NA	1
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	NA	1
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	NA	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	NA	1
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	NA	1
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	NA	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	NA	1
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	NA	1
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]	NA	1
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	NA	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	NA	1
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	NA	1
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	NA	1
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	NA	1
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	NA	1
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]	NA	1
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	NA	1
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]	NA	1
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	NA	1
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	NA	1
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]	NA	1
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]	NA	1
cystathionine beta-synthase activity [GO:0004122]	NA	1
cysteine-type deubiquitinase activity [GO:0004843]	NA	1
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]	NA	1
D-ribulokinase activity [GO:0019150]	NA	1
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	NA	1
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]	NA	1
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	NA	1
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	NA	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	NA	1
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]	NA	1
dynein intermediate chain binding [GO:0045505]	NA	1
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]	NA	1
endopeptidase inhibitor activity [GO:0004866]	NA	1
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	NA	1
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	NA	1
fatty acid binding [GO:0005504]	NA	1
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	NA	1
GDP-L-fucose synthase activity [GO:0050577]	NA	1
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	NA	1
glucosylceramidase activity [GO:0004348]	NA	1
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	NA	1
glycogen (starch) synthase activity [GO:0004373]	NA	1
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	NA	1
guanyl-nucleotide exchange factor activity [GO:0005085]	NA	1
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	NA	1
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	NA	1
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	NA	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	NA	1
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]	NA	1
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	NA	1
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	NA	1
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	NA	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	NA	1
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	NA	1
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	NA	1
metalloendopeptidase activity [GO:0004222]	NA	1
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	NA	1
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	NA	1
peroxisome membrane targeting sequence binding [GO:0033328]	NA	1
phospholipid scramblase activity [GO:0017128]	NA	1
phosphomannomutase activity [GO:0004615]	NA	1
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	NA	1
protein phosphatase activator activity [GO:0072542]	NA	1
pyridoxal kinase activity [GO:0008478]	NA	1
pyrroline-5-carboxylate reductase activity [GO:0004735]	NA	1
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	NA	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	NA	1
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	NA	1
serine-type peptidase activity [GO:0008236]	NA	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	NA	1
spermidine synthase activity [GO:0004766]	NA	1
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]	NA	1
SUMO activating enzyme activity [GO:0019948]	NA	1
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	NA	1
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	NA	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	NA	1
uroporphyrinogen decarboxylase activity [GO:0004853]	NA	1
zinc ion binding [GO:0008270]	NA	2

kable(BP[is.na(BP[,3])==TRUE,1])

x
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; long-chain fatty acid transporter activity [GO:0005324]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
alpha,alpha-trehalase activity [GO:0004555]
amyloid-beta binding [GO:0001540]
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]
ATP binding [GO:0005524]; heat shock protein binding [GO:0031072]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]
DNA binding [GO:0003677]; metal ion binding [GO:0046872]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
hydro-lyase activity [GO:0016836]
hydrolase activity, acting on ester bonds [GO:0016788]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
ligase activity [GO:0016874]
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
peptidyl-aspartic acid 3-dioxygenase activity [GO:0062101]
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein serine/threonine kinase activator activity [GO:0043539]
ribose-5-phosphate isomerase activity [GO:0004751]
sulfuric ester hydrolase activity [GO:0008484]
ubiquitin binding [GO:0043130]

kable(BP[is.na(BP[,2])==TRUE,1])       

x
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; cGMP binding [GO:0030553]; cGMP-dependent protein kinase activity [GO:0004692]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
cation transmembrane transporter activity [GO:0008324]; sugar transmembrane transporter activity [GO:0051119]; transmembrane transporter activity [GO:0022857]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chitin binding [GO:0008061]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper chaperone activity [GO:0016531]; metal ion binding [GO:0046872]
cullin family protein binding [GO:0097602]; kinase activity [GO:0016301]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
damaged DNA binding [GO:0003684]; polyubiquitin modification-dependent protein binding [GO:0031593]; proteasome binding [GO:0070628]; ubiquitin binding [GO:0043130]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
diacylglycerol O-acyltransferase activity [GO:0004144]; long-chain-alcohol O-fatty-acyltransferase activity [GO:0047196]
dynein intermediate chain binding [GO:0045505]
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]
endopeptidase inhibitor activity [GO:0004866]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
fatty acid binding [GO:0005504]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GDP-L-fucose synthase activity [GO:0050577]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucosylceramidase activity [GO:0004348]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glycogen (starch) synthase activity [GO:0004373]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]
kinase activity [GO:0016301]; metal ion binding [GO:0046872]; phosphatidylinositol binding [GO:0035091]; ubiquitin binding [GO:0043130]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metalloendopeptidase activity [GO:0004222]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
peroxisome membrane targeting sequence binding [GO:0033328]
phospholipid scramblase activity [GO:0017128]
phosphomannomutase activity [GO:0004615]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein phosphatase activator activity [GO:0072542]
pyridoxal kinase activity [GO:0008478]
pyrroline-5-carboxylate reductase activity [GO:0004735]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
serine-type peptidase activity [GO:0008236]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
spermidine synthase activity [GO:0004766]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]
SUMO activating enzyme activity [GO:0019948]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
uroporphyrinogen decarboxylase activity [GO:0004853]
zinc ion binding [GO:0008270]

5 Grafik 3

5.0.1 A

############## B
data <- readRDS(file = "results_v002/results_run1_mqpar_extracts_2gether_E4_D1_B_LFQ_combined_txt_proteinGroups.txt_Unique.RDS")
data <- data[[1]]
data_sub <- dplyr::select(data, contains("Pool_G"))
#get rid of FALSE values
B <- data_sub*1
B[B==0] <- NA
ind <- apply(B, 1, function(x) all(is.na(x)))


############AF
data <- readRDS(file = "results_v002/results_run1_mqpar_extracts_2gether_E4_D1_AF_TF_LFQ_combined_txt_proteinGroups.txt_Unique.RDS")
data <- data[[1]]
data_sub <- dplyr::select(data, contains("Pool_AF"))
##get rid of FALSE values
AF <- data_sub*1
AF[AF==0] <- NA
ind <- apply(AF, 1, function(x) all(is.na(x)))

############TF
data <- readRDS(file = "results_v002/results_run1_mqpar_extracts_2gether_E4_D1_AF_TF_LFQ_combined_txt_proteinGroups.txt_Unique.RDS")
data <- data[[1]]
data_sub <- dplyr::select(data, contains("Pool_TF"))
#get rid of FALSE values
TF <- data_sub*1
TF[TF==0] <- NA
ind <- apply(TF, 1, function(x) all(is.na(x)))


## compare AF TF B poster
AF_TF_raw <- readRDS(file = "results_v002/results_run1_mqpar_extracts_2gether_E4_D1_AF_TF_LFQ_combined_txt_proteinGroups.txt_Unique.RDS")
AF_TF_raw <- AF_TF_raw[[1]]
AF <- dplyr::select(AF_TF_raw, contains("AF"))
AF <- apply(AF, 1, any)
fasta <- c()
for (i in 1:length(AF_TF_raw$FASTA)){
  tmp <- strsplit(AF_TF_raw$FASTA[i],split='\\|')[[1]][2]
  fasta <- c(fasta,tmp)
}
AF <- as.data.frame(cbind(AF, fasta))
TF <- dplyr::select(AF_TF_raw, contains("TF"))
TF <- apply(TF, 1, any)
TF <- as.data.frame(cbind(TF, fasta))
B_raw <- readRDS(file = "results_v002/results_run1_mqpar_extracts_2gether_E4_D1_B_LFQ_combined_txt_proteinGroups.txt_Unique.RDS")
B_raw <- B_raw[[1]]
B <- dplyr::select(B_raw, contains("Pool_G"))
B <- apply(B, 1, any)
fasta <- c()
for (i in 1:length(B_raw$FASTA)){
  tmp <- strsplit(B_raw$FASTA[i],split='\\|')[[1]][2]
  fasta <- c(fasta,tmp)
}
B <- as.data.frame(cbind(B, fasta))

AF_TF_B_comparison  <- merge(B, AF,
                             all = TRUE,
                             by = "fasta")
AF_TF_B_comparison <- merge(AF_TF_B_comparison, TF,
                            all = TRUE,
                            by = "fasta")

AF_TF_B_comparison$B <- as.logical(AF_TF_B_comparison$B)
AF_TF_B_comparison$AF <- as.logical(AF_TF_B_comparison$AF)
AF_TF_B_comparison$TF <- as.logical(AF_TF_B_comparison$TF)

B <- AF_TF_B_comparison$fasta[AF_TF_B_comparison$B]
B <- B[!is.na(B)]
AF <- AF_TF_B_comparison$fasta[AF_TF_B_comparison$AF]
AF <- AF[!is.na(AF)]
TF <- AF_TF_B_comparison$fasta[AF_TF_B_comparison$TF]
TF <- TF[!is.na(TF)]

#B <- GetProteinGOInfo(B)
#saveRDS(B,"./go_terms/graph3_A_B_uni.RDS")
GO_1 <- readRDS("./go_terms/graph3_A_B_uni.RDS")
#AF <- GetProteinGOInfo(AF)
#saveRDS(AF,"./go_terms/graph3_A_AF_uni.RDS")
GO_2 <- readRDS("./go_terms/graph3_A_AF_uni.RDS")
#TF <- GetProteinGOInfo(TF)
#saveRDS(TF,"./go_terms/graph3_A_TF_uni.RDS")
GO_3 <- readRDS("./go_terms/graph3_A_TF_uni.RDS")
################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_3$Gene.Ontology..molecular.function.))
t_BP_sorted_3 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
#results_comp <- c(results_comp,sum(is.na(BP[,2])))
#results_comp <- c(results_comp,sum(is.na(BP[,3] & !is.na(BP[,4]))))
#results_comp <- c(results_comp,sum(is.na(BP[,3] & is.na(BP[,4]))))
#length_comp <- c(length_comp, length(BP[,1]), length(BP[,1]), length(BP[,1]))
#name_comp <- c(name_comp, "graph-3A-B to AF/TF", "graph-3A-AF to TF","graph3A Ist nur in B und kommt sowowhl in AF und TF nicht vor")

colnames(BP) <- c("Function", "D1-electrophoretic fractionation","D1-low MW SEC fractionation","D1-high MW SEC fractionation")
kable(BP)

Function	D1-electrophoretic fractionation	D1-low MW SEC fractionation	D1-high MW SEC fractionation
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	2	2	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1	1
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]	1	NA	NA
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	3	1	1
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]	1	NA	NA
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	NA	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	NA	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	NA	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	NA	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	1	NA	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1	1
3’-5’-exodeoxyribonuclease activity [GO:0008296]	1	NA	NA
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]	1	NA	NA
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	NA	NA
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	1	NA
3-dehydrosphinganine reductase activity [GO:0047560]	1	NA	NA
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	1	NA	NA
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]	1	NA	1
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]	1	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	NA	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	NA	NA
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]	1	NA	NA
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	NA	NA
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	3	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	NA	NA
5-formyltetrahydrofolate cyclo-ligase activity [GO:0030272]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1	1
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	2	2	2
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	1	NA	NA
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1	1
6-phosphogluconolactonase activity [GO:0017057]	1	1	1
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]	1	NA	NA
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]	1	NA	NA
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	NA	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	NA	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	NA	NA
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1	1
acetylcholinesterase activity [GO:0003990]	1	NA	NA
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	NA	1
acid phosphatase activity [GO:0003993]	1	NA	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	2	NA	NA
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]	1	NA	NA
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	NA	1
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	1	1
actin binding [GO:0003779]	3	3	2
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	NA	1
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]	1	1	NA
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	1	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	NA	NA
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1	1
actin filament binding [GO:0051015]	11	5	4
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	1	NA	NA
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1	NA
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	2	1
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1	NA
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	1	NA	NA
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	1	NA	NA
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	1	1	1
actin monomer binding [GO:0003785]	1	2	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	2	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	3	2	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	NA	2
acyl-CoA hydrolase activity [GO:0047617]	1	NA	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	NA	NA
acyltransferase activity [GO:0016746]	1	NA	1
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	2	1	1
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]	1	NA	NA
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]	1	NA	NA
adenosylhomocysteinase activity [GO:0004013]	1	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2	2
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]	1	NA	NA
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1	1
ADP-ribose diphosphatase activity [GO:0047631]	1	NA	NA
ADP-ribosylglutamate hydrolase activity [GO:0140293]	1	NA	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	2	1	1
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	4	NA	NA
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]	1	NA	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	NA	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	4	2	2
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1	1
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	1	1	1
alkaline phosphatase activity [GO:0004035]	1	1	1
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA	NA
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1	1
alpha-galactosidase activity [GO:0004557]	3	3	3
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	2	2
alpha-L-fucosidase activity [GO:0004560]	3	3	3
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	2	3	3
alpha,alpha-trehalase activity [GO:0004555]	1	1	2
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	1	NA	NA
amino acid kinase activity [GO:0019202]	1	NA	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	1	NA	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	NA	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	1	1
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]	1	NA	NA
aminoacylase activity [GO:0004046]	2	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1	1
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	NA	NA
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]	1	NA	1
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1	1
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	NA	NA
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	NA	1
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1	1
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]	1	NA	NA
arylformamidase activity [GO:0004061]	1	1	1
asparaginase activity [GO:0004067]; beta-aspartyl-peptidase activity [GO:0008798]	1	1	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	1	1	NA
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	1	NA	NA
aspartic-type endopeptidase activity [GO:0004190]	1	NA	1
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]	1	NA	NA
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]	1	NA	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2	2
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	2	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	6	5	4
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	NA	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	NA	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA helicase activity [GO:0003678]	2	NA	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	2	NA	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	1	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	1	1	1
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]	2	NA	1
ATP binding [GO:0005524]; CMP kinase activity [GO:0036430]; cytidylate kinase activity [GO:0004127]; dCMP kinase activity [GO:0036431]; UMP kinase activity [GO:0033862]	1	NA	NA
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]	1	NA	NA
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]	1	NA	NA
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	2	1	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	NA	NA
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	1	NA	NA
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	1	NA
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	1	1	1
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	NA	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	NA	NA
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1	NA
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]	1	NA	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	NA	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	NA	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]	1	NA	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	1	NA	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	NA	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	1	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	2	2	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	1	1
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	1	NA	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	NA	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1	1
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]	2	NA	NA
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]	1	NA	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]	1	NA	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; SUMO activating enzyme activity [GO:0019948]	1	1	1
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]	1	NA	NA
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]	1	NA	NA
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]	1	NA	NA
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	1	1	1
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	2	2	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	3	1	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1	1
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]	1	NA	NA
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	NA	NA
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	1	NA
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1	1
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	1	NA
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]	1	1	NA
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	2	NA	NA
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]; ubiquitin protein ligase binding [GO:0031625]	1	1	1
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]	1	NA	NA
ATP:ADP antiporter activity [GO:0005471]	1	NA	NA
ATPase activator activity [GO:0001671]	2	NA	NA
beta-galactosidase activity [GO:0004565]	1	1	1
beta-glucosidase activity [GO:0008422]	3	3	3
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]	1	NA	NA
beta-mannosidase activity [GO:0004567]	1	1	2
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	2	2
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1	2
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]	1	NA	NA
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1	1
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]	1	NA	NA
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]	1	NA	NA
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1	1
box H/ACA snoRNA binding [GO:0034513]	1	NA	NA
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	1	1	1
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]	2	NA	NA
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	NA	NA
calcium ion binding [GO:0005509]	13	7	6
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	3	3
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	2	NA	NA
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	1	NA	NA
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	1	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	6	2	3
calcium ion binding [GO:0005509]; laminin binding [GO:0043236]	1	NA	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	NA	NA
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	NA	NA
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	1	1
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	1	NA	NA
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]	1	NA	NA
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	2	1	NA
carbohydrate binding [GO:0030246]	3	1	3
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	2	1	NA
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	NA	NA
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1	1
carbonate dehydratase activity [GO:0004089]; hydro-lyase activity [GO:0016836]; zinc ion binding [GO:0008270]	1	NA	NA
carbonyl reductase (NADPH) activity [GO:0004090]	1	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	1	1	NA
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]	1	NA	NA
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	NA	2
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	1	1
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1	1
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	NA	1
carnitine O-palmitoyltransferase activity [GO:0004095]	1	NA	NA
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1	1
catalytic activity [GO:0003824]	4	NA	NA
catalytic activity [GO:0003824]; FAD binding [GO:0071949]	1	NA	NA
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	NA	NA
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]	1	NA	NA
cell-cell adhesion mediator activity [GO:0098632]	1	NA	NA
cell adhesion molecule binding [GO:0050839]	2	2	2
chaperone binding [GO:0051087]	1	NA	NA
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1	NA
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	NA	NA
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	1	NA	NA
chitin binding [GO:0008061]	2	4	3
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	8	4	4
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]	1	NA	NA
chloride channel activity [GO:0005254]	1	NA	NA
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]	1	NA	NA
chromatin binding [GO:0003682]	1	NA	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]	2	NA	NA
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]	1	NA	NA
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	3	NA	1
citrate (Si)-synthase activity [GO:0004108]	1	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	NA	NA
citrate secondary active transmembrane transporter activity [GO:0071913]	1	NA	NA
clathrin adaptor activity [GO:0035615]	2	NA	NA
clathrin adaptor activity [GO:0035615]; lipid binding [GO:0008289]	1	NA	NA
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]	1	NA	NA
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	6	2	2
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	3	1	NA
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	1	NA	NA
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	NA	NA
copper chaperone activity [GO:0016531]; copper ion binding [GO:0005507]	1	NA	NA
copper ion binding [GO:0005507]	1	NA	NA
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	NA	NA
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2	2
cullin family protein binding [GO:0097602]	1	NA	NA
cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]	1	NA	NA
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	2	1	1
cystathionine beta-synthase activity [GO:0004122]	1	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]	1	NA	1
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	NA	NA
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]	1	NA	NA
cysteine-type endopeptidase activity [GO:0004197]	9	7	5
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1	1
cysteine-type peptidase activity [GO:0008234]	1	NA	NA
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]	1	NA	NA
cytokine activity [GO:0005125]; phenylpyruvate tautomerase activity [GO:0050178]	1	1	NA
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]	1	NA	NA
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]	1	NA	NA
D-ribulokinase activity [GO:0019150]	1	1	1
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	1	NA	NA
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	1	NA	NA
deaminase activity [GO:0019239]	1	1	1
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]	1	NA	1
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	2	1	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	1	NA	NA
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]	1	NA	NA
deoxyribose-phosphate aldolase activity [GO:0004139]	1	NA	NA
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]	1	NA	NA
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	3	2	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1	1
dihydropyrimidinase activity [GO:0004157]	1	1	1
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA	NA
dioxygenase activity [GO:0051213]	1	1	NA
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	1	1
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]	1	NA	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	NA	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	2	NA	NA
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]	1	1	NA
DNA binding [GO:0003677]	1	1	NA
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]	1	NA	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	NA	NA
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	3	3
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	NA	NA
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	NA	NA
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]	1	NA	1
dynein complex binding [GO:0070840]	1	1	NA
dynein intermediate chain binding [GO:0045505]	1	NA	NA
electron transfer activity [GO:0009055]	1	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	1	2
endopeptidase activator activity [GO:0061133]	1	NA	NA
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	3	3
endopeptidase inhibitor activity [GO:0004866]	1	NA	NA
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]	1	NA	NA
endoribonuclease activity [GO:0004521]	1	NA	NA
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1	1
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	1	NA	NA
enoyl-CoA hydratase activity [GO:0004300]	1	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1	1
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]	1	NA	NA
enzyme regulator activity [GO:0030234]	2	2	2
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	1	1	NA
ER retention sequence binding [GO:0046923]	1	NA	NA
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1	1
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]	1	NA	NA
exopolyphosphatase activity [GO:0004309]	1	NA	NA
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	NA	NA
fatty-acyl-CoA binding [GO:0000062]	1	1	NA
fatty acid binding [GO:0005504]	2	NA	NA
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]	1	NA	NA
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]	1	NA	NA
ferrochelatase activity [GO:0004325]	1	NA	NA
FFAT motif binding [GO:0033149]	1	1	NA
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]	1	NA	NA
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1	1
flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]	3	1	2
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1	1
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]	1	NA	NA
fructose-bisphosphate aldolase activity [GO:0004332]	1	1	1
fumarate hydratase activity [GO:0004333]	1	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	NA	NA
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	NA	NA
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	NA	NA
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]	1	NA	NA
gamma-glutamyl-peptidase activity [GO:0034722]	1	NA	1
gamma-glutamylaminecyclotransferase activity [GO:0061929]	1	NA	NA
gamma-glutamylcyclotransferase activity [GO:0003839]	1	1	1
GDP-L-fucose synthase activity [GO:0050577]	1	1	1
GDP-mannose 4,6-dehydratase activity [GO:0008446]	1	NA	1
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	5	NA	NA
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2	2
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	1	NA	NA
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1	1
glucuronosyltransferase activity [GO:0015020]	2	NA	NA
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	NA	NA
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	NA	NA
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1	1
glutathione hydrolase activity [GO:0036374]	1	NA	NA
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	3	1	NA
glutathione transferase activity [GO:0004364]	11	6	5
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	1	NA
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	2	1	1
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	1	1
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1	1
glycogen (starch) synthase activity [GO:0004373]	1	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1	1
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]	1	NA	NA
glycosyltransferase activity [GO:0016757]	1	1	1
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]	1	NA	NA
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1	1
GPI anchor binding [GO:0034235]	1	NA	NA
GTP binding [GO:0005525]	1	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	18	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	NA	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	NA	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	NA	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	4	3	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	NA	NA
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1	1
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA	NA
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	1	NA	NA
guanyl-nucleotide exchange factor activity [GO:0005085]	1	NA	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1	1
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA	NA
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	NA	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	NA	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; oxygen binding [GO:0019825]; oxygen carrier activity [GO:0005344]	2	NA	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	NA	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	1	1
histone binding [GO:0042393]	3	1	NA
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	1	1
Hsp90 protein binding [GO:0051879]	1	1	1
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	1	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1	1
hydrolase activity [GO:0016787]	16	7	7
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	NA	NA
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	2	NA	1
hydrolase activity, acting on ester bonds [GO:0016788]	3	NA	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	3	2	2
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	1	1	NA
hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1	1
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1	1
hydroxyisourate hydrolase activity [GO:0033971]	1	NA	NA
hydroxymethylbilane synthase activity [GO:0004418]	1	NA	NA
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	1	NA	NA
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]	1	NA	NA
hydroxypyruvate isomerase activity [GO:0008903]	1	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	NA	NA
IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	NA	NA
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	NA	NA
inositol-3-phosphate synthase activity [GO:0004512]	1	NA	1
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	2	NA	1
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1	1
iodotyrosine deiodinase activity [GO:0140616]; oxidoreductase activity [GO:0016491]	1	NA	NA
iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-lysine 5-dioxygenase activity [GO:0008475]	1	1	1
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2	2
isomerase activity [GO:0016853]	1	1	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	1	1	1
juvenile-hormone esterase activity [GO:0004453]	1	NA	NA
kinase activity [GO:0016301]	1	NA	NA
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]	1	1	NA
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	1	NA	1
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	NA	NA
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2	2
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	1	NA	NA
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1	1
L-lactate dehydrogenase activity [GO:0004459]	1	NA	NA
L-malate dehydrogenase activity [GO:0030060]	2	2	2
L-methionine-(S)-S-oxide reductase activity [GO:0036456]; peptide-methionine (S)-S-oxide reductase activity [GO:0008113]	1	1	1
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1	1
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]	1	NA	NA
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	2	3
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	NA	NA
lipase activity [GO:0016298]	3	2	2
lipid binding [GO:0008289]	1	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	NA	NA
lipid transporter activity [GO:0005319]	4	2	2
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1	NA
lyase activity [GO:0016829]	1	NA	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1	1
lysozyme activity [GO:0003796]	2	2	NA
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	NA	NA
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	NA	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	1	NA	NA
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	1	1
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1	1
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	NA	NA
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	3	3
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1	1
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]	1	NA	NA
mannose binding [GO:0005537]	2	NA	NA
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1	1
metal ion binding [GO:0046872]	6	2	3
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	1	1	1
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]	1	NA	NA
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	4	3	3
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	NA	NA
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	2	NA	1
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	1	1	1
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]	1	NA	NA
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]	1	NA	NA
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	NA	NA
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	1	1
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]	1	NA	NA
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]	1	NA	NA
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	1	1
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	2	2	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	1	1
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	3	2	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	3	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	5	3	2
metallodipeptidase activity [GO:0070573]	1	1	1
metallopeptidase activity [GO:0008237]	2	1	1
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]	1	NA	NA
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	1	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]	1	NA	NA
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA	NA
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	NA	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1	1
microtubule binding [GO:0008017]	1	NA	1
microtubule plus-end binding [GO:0051010]	1	NA	NA
molecular adaptor activity [GO:0060090]	1	NA	NA
monooxygenase activity [GO:0004497]	1	NA	NA
mRNA binding [GO:0003729]	7	1	2
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]	1	NA	NA
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	1	NA
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	NA	NA
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	2	NA	1
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	2	NA	NA
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1	NA
myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	3	NA	NA
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]	1	1	NA
N-acetylglucosamine kinase activity [GO:0045127]	1	NA	NA
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]	1	NA	NA
N-acetylneuraminate lyase activity [GO:0008747]	1	NA	NA
N-acetyltransferase activity [GO:0008080]	3	1	1
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]	1	NA	NA
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	NA	NA
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	NA	NA
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1	1
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]	1	NA	NA
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]	1	NA	NA
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	NA	NA
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1	1
NEDD8 activating enzyme activity [GO:0019781]	1	NA	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	2	NA	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	NA	NA
nucleic acid binding [GO:0003676]	1	1	2
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]	1	NA	NA
nucleoside triphosphate diphosphatase activity [GO:0047429]	1	NA	NA
nucleotide binding [GO:0000166]	3	2	2
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1	1
nucleotidyltransferase activity [GO:0016779]	1	NA	NA
O-acyltransferase activity [GO:0008374]	1	NA	NA
odorant binding [GO:0005549]	4	4	4
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]	1	NA	NA
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	1	1	1
omega-amidase activity [GO:0050152]	1	1	NA
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]	1	NA	NA
oxidoreductase activity [GO:0016491]	14	5	4
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	NA	NA
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	NA	NA
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	2	2	2
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1	1
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]	1	NA	NA
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	4	1	1
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	2	2	2
palmitoyl-(protein) hydrolase activity [GO:0008474]	2	NA	NA
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]	1	NA	NA
palmitoyltransferase activity [GO:0016409]	1	NA	NA
peptidase activity [GO:0008233]	2	NA	NA
peptide alpha-N-acetyltransferase activity [GO:0004596]	1	NA	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	3	1	1
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]	1	NA	NA
peroxiredoxin activity [GO:0051920]	3	2	2
phosphatase activity [GO:0016791]	7	1	NA
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	NA	NA
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]	1	NA	NA
phosphatidylinositol binding [GO:0035091]	1	1	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	4	NA	NA
phospholipid scramblase activity [GO:0017128]	1	NA	NA
phosphomannomutase activity [GO:0004615]	1	NA	NA
phosphoserine residue binding [GO:0050815]	1	1	1
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]	1	NA	NA
pigment binding [GO:0031409]	1	NA	NA
polyubiquitin modification-dependent protein binding [GO:0031593]	1	NA	NA
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	NA	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA	NA
protein-arginine N-methyltransferase activity [GO:0016274]	2	1	1
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]	1	NA	NA
protein-containing complex binding [GO:0044877]	2	NA	NA
protein-disulfide reductase (NAD(P)) activity [GO:0047134]	1	NA	NA
protein-disulfide reductase activity [GO:0015035]	1	1	NA
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]	1	NA	NA
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA	NA
protein-N-terminal asparagine amidohydrolase activity [GO:0008418]	1	NA	NA
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	1	NA	1
protein disulfide isomerase activity [GO:0003756]	3	3	2
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1	1
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	NA	NA
protein heterodimerization activity [GO:0046982]	1	NA	NA
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]	1	NA	NA
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1	1
protein phosphatase activator activity [GO:0072542]	1	NA	NA
protein phosphatase regulator activity [GO:0019888]	2	NA	1
protein serine/threonine kinase activator activity [GO:0043539]	1	NA	NA
protein tag [GO:0031386]; ubiquitin-like protein ligase binding [GO:0044389]	1	1	1
protein transmembrane transporter activity [GO:0008320]	1	NA	NA
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	NA	NA
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	7	3	3
proton transmembrane transporter activity [GO:0015078]	3	3	4
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	NA	NA
purine-nucleoside phosphorylase activity [GO:0004731]	1	1	NA
pyridoxal kinase activity [GO:0008478]	1	NA	NA
pyridoxal phosphate binding [GO:0030170]	1	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1	1
pyrophosphatase activity [GO:0016462]	1	NA	NA
pyrroline-5-carboxylate reductase activity [GO:0004735]	1	NA	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1	1
Rab geranylgeranyltransferase activity [GO:0004663]	1	NA	NA
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	1	NA
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1	1
ribonuclease P activity [GO:0004526]	1	NA	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	1	1
ribosome binding [GO:0043022]	1	NA	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	1	1
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]	1	NA	NA
RNA binding [GO:0003723]	15	4	4
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1	1
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]	1	NA	NA
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	18	11	15
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	1	NA
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	1	1
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	1	NA	NA
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	1	2
S-formylglutathione hydrolase activity [GO:0018738]	1	1	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	1	1	NA
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	1	NA	NA
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1	1
scavenger receptor activity [GO:0005044]	1	NA	NA
selenium binding [GO:0008430]	1	1	1
sepiapterin reductase activity [GO:0004757]	1	NA	NA
serine-type carboxypeptidase activity [GO:0004185]	1	1	1
serine-type endopeptidase activity [GO:0004252]	40	14	11
serine-type endopeptidase inhibitor activity [GO:0004867]	11	2	3
serine-type peptidase activity [GO:0008236]	1	NA	1
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	NA	NA
signaling receptor activity [GO:0038023]	1	NA	NA
signaling receptor binding [GO:0005102]	2	NA	1
signaling receptor complex adaptor activity [GO:0030159]	1	NA	NA
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]	1	NA	NA
single-stranded DNA binding [GO:0003697]	1	NA	1
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]	1	NA	NA
SNAP receptor activity [GO:0005484]	1	NA	NA
SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]	1	NA	NA
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	1	1
snoRNA binding [GO:0030515]	2	NA	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	1	NA	NA
spermidine synthase activity [GO:0004766]	1	NA	NA
spermine synthase activity [GO:0016768]	1	1	NA
sterol binding [GO:0032934]	3	1	1
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]	1	NA	NA
strictosidine synthase activity [GO:0016844]	1	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	2	4	3
structural constituent of cytoskeleton [GO:0005200]	1	1	NA
structural constituent of ribosome [GO:0003735]	46	16	29
structural molecule activity [GO:0005198]	7	2	4
sulfotransferase activity [GO:0008146]	2	1	NA
sulfur dioxygenase activity [GO:0050313]	1	1	1
sulfuric ester hydrolase activity [GO:0008484]	1	NA	NA
SUMO activating enzyme activity [GO:0019948]	1	NA	NA
thioredoxin-disulfide reductase activity [GO:0004791]	1	NA	NA
thioredoxin peroxidase activity [GO:0008379]	1	1	NA
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	1	NA	1
transaminase activity [GO:0008483]	1	1	NA
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]	1	NA	NA
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	1	NA	NA
translation elongation factor activity [GO:0003746]	3	1	2
translation initiation factor activity [GO:0003743]	3	NA	NA
transmembrane transporter activity [GO:0022857]	1	NA	NA
trehalose-phosphatase activity [GO:0004805]	1	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1	1
tropomyosin binding [GO:0005523]	1	NA	NA
U1 snRNA binding [GO:0030619]	1	NA	NA
U2 snRNA binding [GO:0030620]	1	NA	NA
ubiquitin binding [GO:0043130]	2	1	NA
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	1	1	1
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]	1	NA	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1	NA
UDP-glycosyltransferase activity [GO:0008194]	3	NA	NA
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]	2	NA	NA
unfolded protein binding [GO:0051082]	2	1	2
uroporphyrinogen decarboxylase activity [GO:0004853]	1	1	NA
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1	1
zinc ion binding [GO:0008270]	2	1	1
actin filament binding [GO:0051015]; metal ion binding [GO:0046872]	NA	1	1
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	NA	1	1
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]	NA	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	NA	1	1
chromatin DNA binding [GO:0031490]	NA	1	NA
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	NA	1	1
cysteine-type deubiquitinase activity [GO:0004843]	NA	1	NA
damaged DNA binding [GO:0003684]; DNA helicase activity [GO:0003678]; telomeric DNA binding [GO:0042162]	NA	1	1
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	NA	1	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	NA	1	NA
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	NA	1	NA
peroxisome membrane targeting sequence binding [GO:0033328]	NA	1	1
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	NA	1	1
protein tag [GO:0031386]; ubiquitin protein ligase binding [GO:0031625]	NA	1	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	NA	1	1
structural constituent of nuclear pore [GO:0017056]	NA	1	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; formyltetrahydrofolate dehydrogenase activity [GO:0016155]; hydroxymethyl-, formyl- and related transferase activity [GO:0016742]	NA	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; U5 snRNA binding [GO:0030623]	NA	NA	1
ion channel activity [GO:0005216]	NA	NA	1
ligase activity [GO:0016874]	NA	NA	1
scavenger receptor activity [GO:0005044]; serine-type endopeptidase activity [GO:0004252]	NA	NA	1

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,2]) == TRUE))

x
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]
2-hydroxyglutarate dehydrogenase activity [GO:0047545]
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
3’-5’-exodeoxyribonuclease activity [GO:0008296]
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
3-dehydrosphinganine reductase activity [GO:0047560]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]
acetylcholinesterase activity [GO:0003990]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acid phosphatase activity [GO:0003993]
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]
acyl-CoA hydrolase activity [GO:0047617]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
acyltransferase activity [GO:0016746]
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]
ADP-ribose diphosphatase activity [GO:0047631]
ADP-ribosylglutamate hydrolase activity [GO:0140293]
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]
aldehyde dehydrogenase (NAD+) activity [GO:0004029]
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
aspartic-type endopeptidase activity [GO:0004190]
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA helicase activity [GO:0003678]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]
ATP binding [GO:0005524]; CMP kinase activity [GO:0036430]; cytidylate kinase activity [GO:0004127]; dCMP kinase activity [GO:0036431]; UMP kinase activity [GO:0033862]
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]
ATP:ADP antiporter activity [GO:0005471]
ATPase activator activity [GO:0001671]
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]
box H/ACA snoRNA binding [GO:0034513]
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; laminin binding [GO:0043236]
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]
carbonate dehydratase activity [GO:0004089]; hydro-lyase activity [GO:0016836]; zinc ion binding [GO:0008270]
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]
carnitine O-palmitoyltransferase activity [GO:0004095]
catalytic activity [GO:0003824]
catalytic activity [GO:0003824]; FAD binding [GO:0071949]
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]
cell-cell adhesion mediator activity [GO:0098632]
chaperone binding [GO:0051087]
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]
chloride channel activity [GO:0005254]
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]
chromatin binding [GO:0003682]
chromatin binding [GO:0003682]; histone binding [GO:0042393]
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]
citrate secondary active transmembrane transporter activity [GO:0071913]
clathrin adaptor activity [GO:0035615]
clathrin adaptor activity [GO:0035615]; lipid binding [GO:0008289]
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]
copper chaperone activity [GO:0016531]; copper ion binding [GO:0005507]
copper ion binding [GO:0005507]
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]
cullin family protein binding [GO:0097602]
cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]
cysteine-type peptidase activity [GO:0008234]
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]
deoxyribose-phosphate aldolase activity [GO:0004139]
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]
dynein intermediate chain binding [GO:0045505]
endopeptidase activator activity [GO:0061133]
endopeptidase inhibitor activity [GO:0004866]
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]
endoribonuclease activity [GO:0004521]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]
ER retention sequence binding [GO:0046923]
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]
exopolyphosphatase activity [GO:0004309]
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]
fatty acid binding [GO:0005504]
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]
ferrochelatase activity [GO:0004325]
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]
gamma-glutamyl-peptidase activity [GO:0034722]
gamma-glutamylaminecyclotransferase activity [GO:0061929]
GDP-mannose 4,6-dehydratase activity [GO:0008446]
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucuronosyltransferase activity [GO:0015020]
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]
glutaminyl-peptide cyclotransferase activity [GO:0016603]
glutathione hydrolase activity [GO:0036374]
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]
GPI anchor binding [GO:0034235]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]
heme binding [GO:0020037]; metal ion binding [GO:0046872]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; oxygen binding [GO:0019825]; oxygen carrier activity [GO:0005344]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]
hydrolase activity, acting on ester bonds [GO:0016788]
hydroxyisourate hydrolase activity [GO:0033971]
hydroxymethylbilane synthase activity [GO:0004418]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]
IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
inorganic phosphate transmembrane transporter activity [GO:0005315]
inositol-3-phosphate synthase activity [GO:0004512]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
iodotyrosine deiodinase activity [GO:0140616]; oxidoreductase activity [GO:0016491]
juvenile-hormone esterase activity [GO:0004453]
kinase activity [GO:0016301]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
L-lactate dehydrogenase activity [GO:0004459]
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]
lyase activity [GO:0016829]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]
mannose binding [GO:0005537]
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
microtubule binding [GO:0008017]
microtubule plus-end binding [GO:0051010]
molecular adaptor activity [GO:0060090]
monooxygenase activity [GO:0004497]
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]
myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
N-acetylglucosamine kinase activity [GO:0045127]
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]
N-acetylneuraminate lyase activity [GO:0008747]
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]
NADH dehydrogenase (ubiquinone) activity [GO:0008137]
NEDD8 activating enzyme activity [GO:0019781]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]
nucleoside triphosphate diphosphatase activity [GO:0047429]
nucleotidyltransferase activity [GO:0016779]
O-acyltransferase activity [GO:0008374]
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]
palmitoyl-(protein) hydrolase activity [GO:0008474]
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]
palmitoyltransferase activity [GO:0016409]
peptidase activity [GO:0008233]
peptide alpha-N-acetyltransferase activity [GO:0004596]
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]
phosphatidylinositol bisphosphate binding [GO:1902936]
phospholipid scramblase activity [GO:0017128]
phosphomannomutase activity [GO:0004615]
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]
pigment binding [GO:0031409]
polyubiquitin modification-dependent protein binding [GO:0031593]
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]
protein-containing complex binding [GO:0044877]
protein-disulfide reductase (NAD(P)) activity [GO:0047134]
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein-N-terminal asparagine amidohydrolase activity [GO:0008418]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]
protein heterodimerization activity [GO:0046982]
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]
protein phosphatase activator activity [GO:0072542]
protein phosphatase regulator activity [GO:0019888]
protein serine/threonine kinase activator activity [GO:0043539]
protein transmembrane transporter activity [GO:0008320]
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]
pyridoxal kinase activity [GO:0008478]
pyrophosphatase activity [GO:0016462]
pyrroline-5-carboxylate reductase activity [GO:0004735]
Rab geranylgeranyltransferase activity [GO:0004663]
ribonuclease P activity [GO:0004526]
ribosome binding [GO:0043022]
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
scavenger receptor activity [GO:0005044]
sepiapterin reductase activity [GO:0004757]
serine-type peptidase activity [GO:0008236]
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]
signaling receptor activity [GO:0038023]
signaling receptor binding [GO:0005102]
signaling receptor complex adaptor activity [GO:0030159]
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]
single-stranded DNA binding [GO:0003697]
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]
SNAP receptor activity [GO:0005484]
SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]
snoRNA binding [GO:0030515]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
spermidine synthase activity [GO:0004766]
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]
sulfuric ester hydrolase activity [GO:0008484]
SUMO activating enzyme activity [GO:0019948]
thioredoxin-disulfide reductase activity [GO:0004791]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
translation initiation factor activity [GO:0003743]
transmembrane transporter activity [GO:0022857]
tropomyosin binding [GO:0005523]
U1 snRNA binding [GO:0030619]
U2 snRNA binding [GO:0030620]
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]
UDP-glycosyltransferase activity [GO:0008194]
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]

kable(subset(BP[,1], is.na(BP[,2]) == TRUE & !is.na(BP[,3]) == TRUE))

x
actin filament binding [GO:0051015]; metal ion binding [GO:0046872]
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]
chromatin DNA binding [GO:0031490]
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]
cysteine-type deubiquitinase activity [GO:0004843]
damaged DNA binding [GO:0003684]; DNA helicase activity [GO:0003678]; telomeric DNA binding [GO:0042162]
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
peroxisome membrane targeting sequence binding [GO:0033328]
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]
protein tag [GO:0031386]; ubiquitin protein ligase binding [GO:0031625]
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
structural constituent of nuclear pore [GO:0017056]

kable(subset(BP[,1], is.na(BP[,4]) == TRUE & !is.na(BP[,3]) == TRUE))

x
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]
cytokine activity [GO:0005125]; phenylpyruvate tautomerase activity [GO:0050178]
dioxygenase activity [GO:0051213]
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]
DNA binding [GO:0003677]
dynein complex binding [GO:0070840]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
fatty-acyl-CoA binding [GO:0000062]
FFAT motif binding [GO:0033149]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]
histone binding [GO:0042393]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]
long-chain fatty acid-CoA ligase activity [GO:0004467]
lysozyme activity [GO:0003796]
mRNA binding [GO:0003729]; RNA binding [GO:0003723]
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]
omega-amidase activity [GO:0050152]
phosphatase activity [GO:0016791]
phosphatidylinositol binding [GO:0035091]
protein-disulfide reductase activity [GO:0015035]
purine-nucleoside phosphorylase activity [GO:0004731]
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
spermine synthase activity [GO:0016768]
structural constituent of cytoskeleton [GO:0005200]
sulfotransferase activity [GO:0008146]
thioredoxin peroxidase activity [GO:0008379]
transaminase activity [GO:0008483]
ubiquitin binding [GO:0043130]
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]
uroporphyrinogen decarboxylase activity [GO:0004853]
chitin binding [GO:0008061]; hydrolase activity [GO:0016787]
chromatin DNA binding [GO:0031490]
cysteine-type deubiquitinase activity [GO:0004843]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
structural constituent of nuclear pore [GO:0017056]

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,4]) == TRUE))

x
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]
acyltransferase activity [GO:0016746]
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]
aspartic-type endopeptidase activity [GO:0004190]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]
gamma-glutamyl-peptidase activity [GO:0034722]
GDP-mannose 4,6-dehydratase activity [GO:0008446]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]
inositol-3-phosphate synthase activity [GO:0004512]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
microtubule binding [GO:0008017]
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein phosphatase regulator activity [GO:0019888]
pyrroline-5-carboxylate reductase activity [GO:0004735]
ribonuclease P activity [GO:0004526]
serine-type peptidase activity [GO:0008236]
signaling receptor binding [GO:0005102]
single-stranded DNA binding [GO:0003697]
snoRNA binding [GO:0030515]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; formyltetrahydrofolate dehydrogenase activity [GO:0016155]; hydroxymethyl-, formyl- and related transferase activity [GO:0016742]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; U5 snRNA binding [GO:0030623]
ion channel activity [GO:0005216]
ligase activity [GO:0016874]
scavenger receptor activity [GO:0005044]; serine-type endopeptidase activity [GO:0004252]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
t_BP_sorted_3 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
#results_comp_cc <- c(results_comp_cc,sum(is.na(BP[,2])))
#results_comp_cc <- c(results_comp_cc,sum(is.na(BP[,3] & !is.na(BP[,4]))))
#results_comp_cc <- c(results_comp_cc,sum(is.na(BP[,3] & is.na(BP[,4]))))
#length_comp_cc <- c(length_comp_cc, length(BP[,1]), length(BP[,1]), #length(BP[,1]))
colnames(BP) <- c("Function", "B","AF","TF")
kable(BP)

Function	B	AF	TF
6-phosphofructokinase complex [GO:0005945]	1	1	1
actin cytoskeleton [GO:0015629]; adherens junction [GO:0005912]; cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	1	1
actin cytoskeleton [GO:0015629]; cytoplasm [GO:0005737]	2	1	1
actin filament [GO:0005884]	1	1	1
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]	1	NA	NA
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]	1	1	1
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]	1	NA	NA
adherens junction [GO:0005912]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	NA	NA
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1	1
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]	1	1	1
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]	1	NA	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]	2	NA	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]	1	NA	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]	1	NA	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	NA	NA
AP-2 adaptor complex [GO:0030122]	1	NA	1
AP-2 adaptor complex [GO:0030122]; cytoplasmic vesicle [GO:0031410]	1	NA	NA
AP-2 adaptor complex [GO:0030122]; intracellular membrane-bounded organelle [GO:0043231]	1	NA	NA
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]	1	NA	NA
Arp2/3 protein complex [GO:0005885]	1	1	1
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]	4	NA	NA
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]	1	1	NA
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]	1	NA	NA
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]	1	NA	NA
axon [GO:0030424]; plasma membrane [GO:0005886]	1	NA	NA
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]	1	NA	NA
axoneme [GO:0005930]	1	NA	NA
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]	1	NA	NA
basement membrane [GO:0005604]	2	NA	2
basement membrane [GO:0005604]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	1	1
basement membrane [GO:0005604]; membrane [GO:0016020]	1	NA	1
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]	1	NA	NA
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]	1	NA	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]	1	NA	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]	2	NA	1
box H/ACA snoRNP complex [GO:0031429]	2	NA	NA
calcineurin complex [GO:0005955]	1	NA	NA
cAMP-dependent protein kinase complex [GO:0005952]	2	1	NA
catalytic step 2 spliceosome [GO:0071013]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; cytosol [GO:0005829]; precatalytic spliceosome [GO:0071011]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	1	1
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]	1	NA	NA
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]	1	NA	NA
catenin complex [GO:0016342]	1	1	1
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]	1	NA	NA
cell-cell junction [GO:0005911]; plasma membrane [GO:0005886]	1	1	1
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	2	NA	NA
cell cortex [GO:0005938]; clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]; clathrin-coated endocytic vesicle [GO:0045334]	1	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]	1	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	1	1	NA
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]	1	NA	1
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]	1	1	1
cell projection [GO:0042995]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1	1
cellular anatomical entity [GO:0110165]	5	2	1
chaperonin-containing T-complex [GO:0005832]	4	4	4
chitin-based extracellular matrix [GO:0062129]	2	4	3
chromatin [GO:0000785]; nucleolus [GO:0005730]	1	NA	NA
chromatin [GO:0000785]; nucleus [GO:0005634]	2	NA	NA
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	1	NA	NA
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]	1	NA	NA
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]	1	1	NA
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]	1	1	NA
clathrin adaptor complex [GO:0030131]	1	NA	NA
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]	1	NA	NA
clathrin vesicle coat [GO:0030125]	1	NA	NA
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA	NA
collagen-containing extracellular matrix [GO:0062023]	1	NA	NA
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]	3	NA	NA
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	1	1	1
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]	4	NA	1
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]	2	NA	NA
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	2	NA	NA
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]	2	1	1
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]	1	NA	1
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]	1	NA	NA
cortical actin cytoskeleton [GO:0030864]	1	1	1
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]	1	NA	NA
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]	1	NA	NA
cytoplasm [GO:0005737]	116	66	64
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]	1	NA	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]	1	1	1
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; dystroglycan complex [GO:0016011]; extracellular space [GO:0005615]; nucleoplasm [GO:0005654]; postsynaptic membrane [GO:0045211]; sarcolemma [GO:0042383]	1	NA	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; myosin complex [GO:0016459]; sarcomere [GO:0030017]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]	2	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]	1	NA	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]	2	1	1
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	1	NA
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]	1	NA	NA
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]	1	NA	NA
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1	1
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]	1	NA	NA
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	2	NA	1
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]	1	NA	NA
cytoplasm [GO:0005737]; intracellular membrane-bounded organelle [GO:0043231]	2	1	1
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]	1	NA	NA
cytoplasm [GO:0005737]; lysosome [GO:0005764]	4	3	3
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]	1	NA	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]	2	NA	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]	1	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]	1	NA	NA
cytoplasm [GO:0005737]; microtubule [GO:0005874]	2	1	1
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]	1	1	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]	1	NA	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]	1	NA	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]	5	1	5
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	1	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]	1	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1	1
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]	1	NA	NA
cytoplasm [GO:0005737]; myosin complex [GO:0016459]	1	1	1
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]	1	NA	NA
cytoplasm [GO:0005737]; myosin II complex [GO:0016460]	1	1	1
cytoplasm [GO:0005737]; nascent polypeptide-associated complex [GO:0005854]	1	1	1
cytoplasm [GO:0005737]; NatA complex [GO:0031415]	1	NA	NA
cytoplasm [GO:0005737]; neuron projection [GO:0043005]	1	NA	1
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]	2	NA	NA
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]	1	NA	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]	1	NA	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]	1	NA	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]	18	6	5
cytoplasm [GO:0005737]; nucleus [GO:0005634]; polysome [GO:0005844]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	5	5	5
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	2	2	2
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA	NA
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	NA	NA
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]	2	NA	1
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]	3	3	3
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1	1
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]	1	NA	1
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]	1	NA	1
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA	NA
cytoplasm [GO:0005737]; ribose phosphate diphosphokinase complex [GO:0002189]	2	1	1
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]	2	1	1
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]	1	NA	NA
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]	1	NA	NA
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]	1	NA	NA
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]	1	NA	NA
cytoskeleton [GO:0005856]	1	1	NA
cytoskeleton [GO:0005856]; membrane [GO:0016020]	1	NA	1
cytosol [GO:0005829]	45	28	28
cytosol [GO:0005829]; cytosolic small ribosomal subunit [GO:0022627]	1	1	1
cytosol [GO:0005829]; early endosome [GO:0005769]; endomembrane system [GO:0012505]; phagocytic vesicle [GO:0045335]	1	NA	NA
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]	1	NA	NA
cytosol [GO:0005829]; endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	NA	NA
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]	1	1	1
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]	1	NA	NA
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]	1	NA	NA
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1	1
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]	1	1	NA
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]	1	NA	NA
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]	1	NA	1
cytosol [GO:0005829]; membrane [GO:0016020]; mitochondrion [GO:0005739]	1	NA	NA
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]	1	NA	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]	5	3	3
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	NA	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1	1
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]	1	NA	NA
cytosol [GO:0005829]; nucleus [GO:0005634]	12	2	2
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]	1	NA	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA	1
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; ribosome [GO:0005840]	1	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; RISC complex [GO:0016442]	1	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	1	1
cytosol [GO:0005829]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; protein-containing complex [GO:0032991]	1	1	1
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]	1	NA	NA
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]	1	NA	1
cytosolic large ribosomal subunit [GO:0022625]	30	15	24
cytosolic large ribosomal subunit [GO:0022625]; large ribosomal subunit [GO:0015934]	1	1	1
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]	1	NA	1
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]	13	8	7
cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]	1	NA	NA
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]	1	NA	NA
cytosolic small ribosomal subunit [GO:0022627]; small-subunit processome [GO:0032040]	1	1	1
cytosolic small ribosomal subunit [GO:0022627]; small ribosomal subunit [GO:0015935]	2	2	2
dendrite [GO:0030425]	1	NA	NA
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]	1	1	NA
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]	1	NA	NA
DNA replication factor A complex [GO:0005662]	1	NA	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]	1	1	1
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]	1	NA	NA
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]	2	1	1
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]	1	NA	NA
early endosome membrane [GO:0031901]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; membrane [GO:0016020]; multivesicular body membrane [GO:0032585]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]; transport vesicle membrane [GO:0030658]	1	NA	NA
EKC/KEOPS complex [GO:0000408]	1	NA	NA
elongator holoenzyme complex [GO:0033588]	1	NA	NA
elongin complex [GO:0070449]	1	NA	NA
endomembrane system [GO:0012505]	2	NA	NA
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]	1	NA	NA
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	NA	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]	1	NA	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]	1	NA	NA
endopeptidase Clp complex [GO:0009368]	1	NA	NA
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	NA	NA
endoplasmic reticulum [GO:0005783]	4	2	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]	1	NA	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum lumen [GO:0005788]	3	2	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	2	NA	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]	1	1	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]	1	1	1
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]	2	NA	NA
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	2	1	NA
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]	1	1	NA
endoplasmic reticulum chaperone complex [GO:0034663]	1	1	1
endoplasmic reticulum lumen [GO:0005788]	4	3	2
endoplasmic reticulum lumen [GO:0005788]; endoplasmic reticulum membrane [GO:0005789]	1	1	1
endoplasmic reticulum membrane [GO:0005789]	15	2	1
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	1	NA
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; endoplasmic reticulum-Golgi intermediate compartment membrane [GO:0033116]; ER to Golgi transport vesicle membrane [GO:0012507]; Golgi membrane [GO:0000139]; melanosome [GO:0042470]; SNARE complex [GO:0031201]	1	NA	NA
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]	1	NA	NA
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]	2	NA	NA
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	1	1	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]	1	NA	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]	1	NA	NA
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]	1	1	NA
endosome [GO:0005768]; Golgi apparatus [GO:0005794]; insulin-responsive compartment [GO:0032593]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]; synaptic vesicle [GO:0008021]	1	NA	NA
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]	1	NA	NA
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]	1	NA	NA
ESC/E(Z) complex [GO:0035098]; nucleus [GO:0005634]; NuRD complex [GO:0016581]	1	1	NA
ESCRT I complex [GO:0000813]	1	NA	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]	5	3	2
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]	1	NA	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]	1	NA	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]	1	NA	NA
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]	1	NA	NA
eukaryotic translation elongation factor 1 complex [GO:0005853]	1	NA	1
eukaryotic translation initiation factor 2B complex [GO:0005851]	2	NA	NA
eukaryotic translation initiation factor 4F complex [GO:0016281]	2	NA	NA
external side of plasma membrane [GO:0009897]	1	1	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]	1	1	2
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	NA	NA
extracellular region [GO:0005576]	22	14	14
extracellular region [GO:0005576]; membrane [GO:0016020]	2	NA	1
extracellular space [GO:0005615]	36	13	11
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]	1	NA	NA
extracellular space [GO:0005615]; lysosome [GO:0005764]	12	7	6
extracellular space [GO:0005615]; membrane [GO:0016020]	4	1	1
extracellular space [GO:0005615]; plasma membrane [GO:0005886]	1	1	1
F-actin capping protein complex [GO:0008290]	1	NA	NA
GET complex [GO:0043529]	1	NA	NA
glutamate-cysteine ligase complex [GO:0017109]	2	2	1
glycerol-3-phosphate dehydrogenase complex [GO:0009331]	2	1	1
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1	1
GMP reductase complex [GO:1902560]	1	1	1
Golgi apparatus [GO:0005794]	1	NA	1
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	1	NA	NA
Golgi membrane [GO:0000139]	1	NA	NA
Golgi stack [GO:0005795]	1	NA	NA
heterotrimeric G-protein complex [GO:0005834]	2	NA	NA
Ino80 complex [GO:0031011]; NuA4 histone acetyltransferase complex [GO:0035267]; R2TP complex [GO:0097255]; Swr1 complex [GO:0000812]	2	NA	NA
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]	1	1	NA
intracellular membrane-bounded organelle [GO:0043231]	2	2	2
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]	1	NA	NA
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]	1	1	1
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]	4	NA	NA
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]	1	NA	NA
intracellular non-membrane-bounded organelle [GO:0043232]	1	1	1
intracellular organelle [GO:0043229]	4	2	2
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]	1	NA	NA
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]	1	NA	NA
laminin complex [GO:0043256]	1	NA	NA
late endosome [GO:0005770]; lysosome [GO:0005764]; phagocytic vesicle [GO:0045335]	1	NA	NA
lipid droplet [GO:0005811]; membrane [GO:0016020]	2	NA	NA
lysosome [GO:0005764]	6	6	7
lysosome [GO:0005764]; membrane [GO:0016020]	2	1	2
lysosome [GO:0005764]; vacuole [GO:0005773]	1	1	1
membrane [GO:0016020]	44	8	14
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]	1	NA	NA
membrane [GO:0016020]; mitochondrion [GO:0005739]	5	2	2
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	NA	NA
membrane [GO:0016020]; peroxisome [GO:0005777]	3	1	1
membrane [GO:0016020]; plasma membrane [GO:0005886]	4	2	2
membrane [GO:0016020]; protein-containing complex [GO:0032991]	1	NA	NA
membrane [GO:0016020]; SAM complex [GO:0001401]	1	NA	NA
membrane [GO:0016020]; sarcoplasmic reticulum membrane [GO:0033017]	1	1	1
membrane [GO:0016020]; spectrin [GO:0008091]	1	1	1
membrane [GO:0016020]; synapse [GO:0045202]	1	1	1
membrane [GO:0016020]; trans-Golgi network [GO:0005802]	1	NA	NA
membrane [GO:0016020]; TRC complex [GO:0072380]	1	NA	NA
MICOS complex [GO:0061617]	1	NA	NA
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]	1	NA	NA
mitochondrial fatty acid beta-oxidation multienzyme complex [GO:0016507]	1	1	1
mitochondrial inner membrane [GO:0005743]	8	NA	NA
mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]	1	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]	1	NA	NA
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]	2	NA	NA
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	NA	1
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]	1	NA	NA
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]	1	NA	NA
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]	1	NA	NA
mitochondrial intermembrane space [GO:0005758]; respirasome [GO:0070469]	1	1	1
mitochondrial large ribosomal subunit [GO:0005762]	7	NA	3
mitochondrial matrix [GO:0005759]	7	5	5
mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1	1
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]	1	NA	NA
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]	1	NA	1
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]	1	NA	NA
mitochondrial outer membrane [GO:0005741]	2	NA	NA
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]	1	NA	NA
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]	1	NA	1
mitochondrial outer membrane translocase complex [GO:0005742]	1	NA	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	1	NA	1
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]	2	2	2
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	2	1	2
mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1	1
mitochondrial proton-transporting ATP synthase, stator stalk [GO:0000274]	1	1	1
mitochondrial pyruvate dehydrogenase complex [GO:0005967]	1	1	1
mitochondrial respiratory chain complex I [GO:0005747]	17	NA	NA
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) [GO:0005749]	1	1	1
mitochondrial respiratory chain complex III [GO:0005750]	4	1	3
mitochondrial respiratory chain complex IV [GO:0005751]	6	NA	NA
mitochondrial ribonuclease P complex [GO:0030678]	1	NA	1
mitochondrial ribosome [GO:0005761]	1	NA	NA
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]	1	NA	NA
mitochondrial small ribosomal subunit [GO:0005763]	10	NA	7
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]	1	NA	1
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]	1	NA	NA
mitochondrion [GO:0005739]	54	28	28
mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]	5	4	3
mitochondrion [GO:0005739]; peroxisome [GO:0005777]	7	1	NA
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]	1	NA	NA
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	5	NA	1
mitochondrion [GO:0005739]; ribosome [GO:0005840]	2	NA	NA
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]	1	1	1
mitochondrion [GO:0005739]; succinate-CoA ligase complex [GO:0042709]	2	2	2
mitochondrion [GO:0005739]; tricarboxylic acid cycle enzyme complex [GO:0045239]	1	1	1
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]	1	1	NA
myosin filament [GO:0032982]; myosin II complex [GO:0016460]; sarcomere [GO:0030017]	1	1	1
NatB complex [GO:0031416]	1	NA	NA
neuron projection [GO:0043005]	1	NA	NA
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]	1	NA	NA
nuclear outer membrane [GO:0005640]	1	NA	NA
nuclear pore outer ring [GO:0031080]	1	NA	NA
nuclear speck [GO:0016607]	2	NA	1
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]	1	NA	NA
nucleoplasm [GO:0005654]	2	NA	NA
nucleosome [GO:0000786]; nucleus [GO:0005634]	3	3	3
nucleus [GO:0005634]	21	12	9
nucleus [GO:0005634]; P-body [GO:0000932]	1	NA	NA
nucleus [GO:0005634]; P granule [GO:0043186]	1	NA	1
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	1	1	1
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]	3	2	3
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA	1
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]	1	1	NA
nucleus [GO:0005634]; U2 snRNP [GO:0005686]	1	NA	NA
nucleus [GO:0005634]; ubiquitin ligase complex [GO:0000151]	1	1	1
nucleus [GO:0005634]; Z disc [GO:0030018]	1	1	1
oligosaccharyltransferase complex [GO:0008250]	5	NA	NA
P-body [GO:0000932]	1	NA	NA
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]	1	NA	NA
P granule [GO:0043186]	1	1	1
peroxisome [GO:0005777]	14	8	9
phenylalanine-tRNA ligase complex [GO:0009328]	1	NA	NA
phosphopyruvate hydratase complex [GO:0000015]	1	1	1
plasma membrane [GO:0005886]	19	2	5
proteasome complex [GO:0000502]	1	NA	NA
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]	1	1	1
proteasome regulatory particle [GO:0005838]	1	1	1
proteasome regulatory particle, lid subcomplex [GO:0008541]	3	3	3
proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178]	1	1	1
proton-transporting V-type ATPase complex [GO:0033176]	1	NA	NA
proton-transporting V-type ATPase, V1 domain [GO:0033180]	1	1	1
Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA	NA
Ragulator complex [GO:0071986]	1	NA	NA
ribonucleoprotein complex [GO:1990904]	3	2	2
ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	7	4	3
RNA polymerase I complex [GO:0005736]; RNA polymerase II, core complex [GO:0005665]; RNA polymerase III complex [GO:0005666]	2	NA	NA
sarcoplasmic reticulum membrane [GO:0033017]	1	NA	NA
SCF ubiquitin ligase complex [GO:0019005]	1	NA	NA
Sec61 translocon complex [GO:0005784]	1	NA	NA
signal peptidase complex [GO:0005787]	1	NA	NA
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	NA	NA
SNARE complex [GO:0031201]	1	NA	NA
sodium:potassium-exchanging ATPase complex [GO:0005890]	2	NA	NA
spliceosomal complex [GO:0005681]	1	NA	NA
synapse [GO:0045202]	1	NA	NA
TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]	1	NA	NA
translation release factor complex [GO:0018444]	1	1	1
tRNA-splicing ligase complex [GO:0072669]	2	NA	NA
troponin complex [GO:0005861]	5	3	2
U1 snRNP [GO:0005685]	1	NA	NA
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]	1	NA	NA
vacuolar proton-transporting V-type ATPase complex [GO:0016471]	2	1	NA
vacuolar proton-transporting V-type ATPase, V1 domain [GO:0000221]	3	2	3
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	NA	NA
actin cytoskeleton [GO:0015629]; nucleus [GO:0005634]; Z disc [GO:0030018]	NA	1	NA
actin cytoskeleton [GO:0015629]; plasma membrane [GO:0005886]	NA	1	1
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]	NA	1	1
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	NA	1	1
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]	NA	1	1
cytoskeleton [GO:0005856]; cytosol [GO:0005829]	NA	1	1
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]	NA	1	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]	NA	1	1
eukaryotic translation initiation factor 2 complex [GO:0005850]	NA	1	NA
Ku70:Ku80 complex [GO:0043564]	NA	1	1
mediator complex [GO:0016592]; mitochondrion [GO:0005739]	NA	1	1
membrane [GO:0016020]; nuclear pore [GO:0005643]	NA	1	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	NA	1	1
nuclear inner membrane [GO:0005637]	NA	1	NA
nucleus [GO:0005634]; proteasome complex [GO:0000502]; proteasome regulatory particle, lid subcomplex [GO:0008541]	NA	1	1
peroxisomal membrane [GO:0005778]	NA	1	1
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	NA	1	NA
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]	NA	NA	1
cation channel complex [GO:0034703]	NA	NA	1
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]	NA	NA	1
nucleus [GO:0005634]; site of double-strand break [GO:0035861]	NA	NA	1
ribonucleoprotein complex [GO:1990904]; U2-type catalytic step 2 spliceosome [GO:0071007]; U4/U6 x U5 tri-snRNP complex [GO:0046540]	NA	NA	1

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,2]) == TRUE))

x
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; nucleus [GO:0005634]
AP-2 adaptor complex [GO:0030122]
AP-2 adaptor complex [GO:0030122]; cytoplasmic vesicle [GO:0031410]
AP-2 adaptor complex [GO:0030122]; intracellular membrane-bounded organelle [GO:0043231]
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]
axon [GO:0030424]; plasma membrane [GO:0005886]
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]
axoneme [GO:0005930]
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]
basement membrane [GO:0005604]
basement membrane [GO:0005604]; membrane [GO:0016020]
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]
box H/ACA snoRNP complex [GO:0031429]
calcineurin complex [GO:0005955]
catalytic step 2 spliceosome [GO:0071013]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]
chromatin [GO:0000785]; nucleolus [GO:0005730]
chromatin [GO:0000785]; nucleus [GO:0005634]
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]
clathrin adaptor complex [GO:0030131]
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]
clathrin vesicle coat [GO:0030125]
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]
collagen-containing extracellular matrix [GO:0062023]
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; dystroglycan complex [GO:0016011]; extracellular space [GO:0005615]; nucleoplasm [GO:0005654]; postsynaptic membrane [GO:0045211]; sarcolemma [GO:0042383]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]
cytoplasm [GO:0005737]; NatA complex [GO:0031415]
cytoplasm [GO:0005737]; neuron projection [GO:0043005]
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]
cytoskeleton [GO:0005856]; membrane [GO:0016020]
cytosol [GO:0005829]; early endosome [GO:0005769]; endomembrane system [GO:0012505]; phagocytic vesicle [GO:0045335]
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]
cytosol [GO:0005829]; endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]
cytosol [GO:0005829]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]
dendrite [GO:0030425]
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]
DNA replication factor A complex [GO:0005662]
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]
early endosome membrane [GO:0031901]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; membrane [GO:0016020]; multivesicular body membrane [GO:0032585]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]; transport vesicle membrane [GO:0030658]
EKC/KEOPS complex [GO:0000408]
elongator holoenzyme complex [GO:0033588]
elongin complex [GO:0070449]
endomembrane system [GO:0012505]
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]
endomembrane system [GO:0012505]; membrane [GO:0016020]
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]
endopeptidase Clp complex [GO:0009368]
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; endoplasmic reticulum-Golgi intermediate compartment membrane [GO:0033116]; ER to Golgi transport vesicle membrane [GO:0012507]; Golgi membrane [GO:0000139]; melanosome [GO:0042470]; SNARE complex [GO:0031201]
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]
endosome [GO:0005768]; Golgi apparatus [GO:0005794]; insulin-responsive compartment [GO:0032593]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]; synaptic vesicle [GO:0008021]
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]
ESCRT I complex [GO:0000813]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]
eukaryotic translation elongation factor 1 complex [GO:0005853]
eukaryotic translation initiation factor 2B complex [GO:0005851]
eukaryotic translation initiation factor 4F complex [GO:0016281]
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]
extracellular region [GO:0005576]; membrane [GO:0016020]
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]
F-actin capping protein complex [GO:0008290]
GET complex [GO:0043529]
Golgi apparatus [GO:0005794]
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]
Golgi membrane [GO:0000139]
Golgi stack [GO:0005795]
heterotrimeric G-protein complex [GO:0005834]
Ino80 complex [GO:0031011]; NuA4 histone acetyltransferase complex [GO:0035267]; R2TP complex [GO:0097255]; Swr1 complex [GO:0000812]
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]
laminin complex [GO:0043256]
late endosome [GO:0005770]; lysosome [GO:0005764]; phagocytic vesicle [GO:0045335]
lipid droplet [GO:0005811]; membrane [GO:0016020]
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
membrane [GO:0016020]; protein-containing complex [GO:0032991]
membrane [GO:0016020]; SAM complex [GO:0001401]
membrane [GO:0016020]; trans-Golgi network [GO:0005802]
membrane [GO:0016020]; TRC complex [GO:0072380]
MICOS complex [GO:0061617]
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]
mitochondrial inner membrane [GO:0005743]
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]
mitochondrial large ribosomal subunit [GO:0005762]
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]
mitochondrial outer membrane [GO:0005741]
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]
mitochondrial outer membrane translocase complex [GO:0005742]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]
mitochondrial respiratory chain complex I [GO:0005747]
mitochondrial respiratory chain complex IV [GO:0005751]
mitochondrial ribonuclease P complex [GO:0030678]
mitochondrial ribosome [GO:0005761]
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]
mitochondrial small ribosomal subunit [GO:0005763]
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]
mitochondrion [GO:0005739]; ribosome [GO:0005840]
NatB complex [GO:0031416]
neuron projection [GO:0043005]
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]
nuclear outer membrane [GO:0005640]
nuclear pore outer ring [GO:0031080]
nuclear speck [GO:0016607]
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]
nucleoplasm [GO:0005654]
nucleus [GO:0005634]; P-body [GO:0000932]
nucleus [GO:0005634]; P granule [GO:0043186]
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
nucleus [GO:0005634]; U2 snRNP [GO:0005686]
oligosaccharyltransferase complex [GO:0008250]
P-body [GO:0000932]
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]
phenylalanine-tRNA ligase complex [GO:0009328]
proteasome complex [GO:0000502]
proton-transporting V-type ATPase complex [GO:0033176]
Rab-protein geranylgeranyltransferase complex [GO:0005968]
Ragulator complex [GO:0071986]
RNA polymerase I complex [GO:0005736]; RNA polymerase II, core complex [GO:0005665]; RNA polymerase III complex [GO:0005666]
sarcoplasmic reticulum membrane [GO:0033017]
SCF ubiquitin ligase complex [GO:0019005]
Sec61 translocon complex [GO:0005784]
signal peptidase complex [GO:0005787]
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
SNARE complex [GO:0031201]
sodium:potassium-exchanging ATPase complex [GO:0005890]
spliceosomal complex [GO:0005681]
synapse [GO:0045202]
TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]
tRNA-splicing ligase complex [GO:0072669]
U1 snRNP [GO:0005685]
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]

kable(subset(BP[,1], is.na(BP[,2]) == TRUE & !is.na(BP[,3]) == TRUE))

x
actin cytoskeleton [GO:0015629]; nucleus [GO:0005634]; Z disc [GO:0030018]
actin cytoskeleton [GO:0015629]; plasma membrane [GO:0005886]
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]
cytoskeleton [GO:0005856]; cytosol [GO:0005829]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]
eukaryotic translation initiation factor 2 complex [GO:0005850]
Ku70:Ku80 complex [GO:0043564]
mediator complex [GO:0016592]; mitochondrion [GO:0005739]
membrane [GO:0016020]; nuclear pore [GO:0005643]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]
nuclear inner membrane [GO:0005637]
nucleus [GO:0005634]; proteasome complex [GO:0000502]; proteasome regulatory particle, lid subcomplex [GO:0008541]
peroxisomal membrane [GO:0005778]
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]

kable(subset(BP[,1], is.na(BP[,4]) == TRUE & !is.na(BP[,3]) == TRUE))

x
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]
cAMP-dependent protein kinase complex [GO:0005952]
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]
cytoskeleton [GO:0005856]
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]
ESC/E(Z) complex [GO:0035098]; nucleus [GO:0005634]; NuRD complex [GO:0016581]
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]
mitochondrion [GO:0005739]; peroxisome [GO:0005777]
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]
vacuolar proton-transporting V-type ATPase complex [GO:0016471]
actin cytoskeleton [GO:0015629]; nucleus [GO:0005634]; Z disc [GO:0030018]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]
eukaryotic translation initiation factor 2 complex [GO:0005850]
membrane [GO:0016020]; nuclear pore [GO:0005643]
nuclear inner membrane [GO:0005637]
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]

kable(subset(BP[,1], is.na(BP[,3]) == TRUE & !is.na(BP[,4]) == TRUE))

x
AP-2 adaptor complex [GO:0030122]
basement membrane [GO:0005604]
basement membrane [GO:0005604]; membrane [GO:0016020]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; neuron projection [GO:0043005]
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]
cytoskeleton [GO:0005856]; membrane [GO:0016020]
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]
eukaryotic translation elongation factor 1 complex [GO:0005853]
extracellular region [GO:0005576]; membrane [GO:0016020]
Golgi apparatus [GO:0005794]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]
mitochondrial large ribosomal subunit [GO:0005762]
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]
mitochondrial ribonuclease P complex [GO:0030678]
mitochondrial small ribosomal subunit [GO:0005763]
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]
nuclear speck [GO:0016607]
nucleus [GO:0005634]; P granule [GO:0043186]
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]
cation channel complex [GO:0034703]
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]
nucleus [GO:0005634]; site of double-strand break [GO:0035861]
ribonucleoprotein complex [GO:1990904]; U2-type catalytic step 2 spliceosome [GO:0071007]; U4/U6 x U5 tri-snRNP complex [GO:0046540]

5.1 B

#D1_uni <- GetProteinGOInfo(B)
#saveRDS(D1_uni,"./go_terms/graph3_B_B_uni.RDS")
GO_1 <- readRDS("./go_terms/graph3_B_B_uni.RDS")
#aj <- GetProteinGOInfo(aj)
#saveRDS(aj,"./go_terms/graph3_B_aj_uni.RDS")
GO_2 <- readRDS("./go_terms/graph3_B_aj_uni.RDS")

################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp <- c(results_comp, tmp/(length(BP[,1])))
name_comp <- c(name_comp,"graph3B-pool+fracD1","graph3B-onlyFracD1","graph3B-onlyPoolD1")
colnames(BP) <- c("Function", "D1","D1 pool")
kable(BP)

Function	D1	D1 pool
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	2	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]	1	NA
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	3	1
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]	1	NA
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’-5’-exodeoxyribonuclease activity [GO:0008296]	1	NA
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]	1	NA
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	NA
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	1
3-dehydrosphinganine reductase activity [GO:0047560]	1	NA
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	1	NA
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]	1	NA
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	NA
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]	1	NA
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	3	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	NA
5-formyltetrahydrofolate cyclo-ligase activity [GO:0030272]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	NA
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	2	1
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	1	NA
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6-phosphogluconolactonase activity [GO:0017057]	1	NA
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]	1	NA
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]	1	NA
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	NA
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	1
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	2
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]	1	NA
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	1
acid phosphatase activity [GO:0003993]	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	2	NA
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]	1	NA
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	3
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	1
actin binding [GO:0003779]	3	2
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]	1	NA
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	NA
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	11	5
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	1	NA
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	NA
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	1	NA
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	1	NA
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	1	NA
actin monomer binding [GO:0003785]	1	2
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	2	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	3	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	2
acyl-CoA hydrolase activity [GO:0047617]	1	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	NA
acyltransferase activity [GO:0016746]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	2	1
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]	1	NA
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]	1	NA
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]	1	NA
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1
ADP-ribose diphosphatase activity [GO:0047631]	1	NA
ADP-ribosylglutamate hydrolase activity [GO:0140293]	1	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	2	1
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	1
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	4	NA
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]	1	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	1
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	4	1
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	1	NA
alkaline phosphatase activity [GO:0004035]	1	1
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	3	1
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
alpha-L-fucosidase activity [GO:0004560]	3	2
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	2	1
alpha,alpha-trehalase activity [GO:0004555]	1	NA
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	1	NA
amino acid kinase activity [GO:0019202]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	1
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]	1	NA
aminoacylase activity [GO:0004046]	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	1
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]	1	NA
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	1
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	NA
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	1
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]	1	NA
arylformamidase activity [GO:0004061]	1	1
asparaginase activity [GO:0004067]; beta-aspartyl-peptidase activity [GO:0008798]	1	NA
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	1	NA
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	1	NA
aspartic-type endopeptidase activity [GO:0004190]	1	NA
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]	1	NA
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	2
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	2	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA helicase activity [GO:0003678]	2	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	2	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	1	NA
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]	2	NA
ATP binding [GO:0005524]; CMP kinase activity [GO:0036430]; cytidylate kinase activity [GO:0004127]; dCMP kinase activity [GO:0036431]; UMP kinase activity [GO:0033862]	1	NA
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]	1	NA
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]	1	NA
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	2	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	NA
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	1	NA
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	1
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	1	NA
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	NA
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]	1	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	2
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	1
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	2	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	1	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	1
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]	2	NA
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; SUMO activating enzyme activity [GO:0019948]	1	NA
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]	1	NA
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]	1	NA
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]	1	NA
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	1	NA
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	2	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	3	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]	1	NA
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	1
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	1
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	1
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	1
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]	1	NA
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	2	NA
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]; ubiquitin protein ligase binding [GO:0031625]	1	NA
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]	1	NA
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase activator activity [GO:0001671]	2	NA
beta-galactosidase activity [GO:0004565]	1	NA
beta-glucosidase activity [GO:0008422]	3	1
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]	1	NA
beta-mannosidase activity [GO:0004567]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	2
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]	1	NA
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]	1	NA
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]	1	NA
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
box H/ACA snoRNA binding [GO:0034513]	1	NA
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	1	NA
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]	2	NA
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	NA
calcium ion binding [GO:0005509]	13	8
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	3
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	2	1
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	1	NA
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	6	NA
calcium ion binding [GO:0005509]; laminin binding [GO:0043236]	1	NA
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	NA
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	1
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	1	NA
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]	1	NA
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	2	1
carbohydrate binding [GO:0030246]	3	2
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	2	NA
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	1
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	1
carbonate dehydratase activity [GO:0004089]; hydro-lyase activity [GO:0016836]; zinc ion binding [GO:0008270]	1	NA
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	2
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	1	NA
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]	1	NA
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	NA
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	1
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	NA
carnitine O-palmitoyltransferase activity [GO:0004095]	1	NA
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]	4	NA
catalytic activity [GO:0003824]; FAD binding [GO:0071949]	1	NA
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]	1	NA
cell-cell adhesion mediator activity [GO:0098632]	1	NA
cell adhesion molecule binding [GO:0050839]	2	2
chaperone binding [GO:0051087]	1	NA
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	1
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	1
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	1	NA
chitin binding [GO:0008061]	2	3
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	1
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	8	1
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]	1	NA
chloride channel activity [GO:0005254]	1	1
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]	1	NA
chromatin binding [GO:0003682]	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]	2	1
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]	1	NA
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	3	1
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	1
citrate secondary active transmembrane transporter activity [GO:0071913]	1	NA
clathrin adaptor activity [GO:0035615]	2	NA
clathrin adaptor activity [GO:0035615]; lipid binding [GO:0008289]	1	NA
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]	1	NA
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	6	2
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	3	1
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	1	NA
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1
copper chaperone activity [GO:0016531]; copper ion binding [GO:0005507]	1	NA
copper ion binding [GO:0005507]	1	NA
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2
cullin family protein binding [GO:0097602]	1	NA
cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]	1	NA
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	2	1
cystathionine beta-synthase activity [GO:0004122]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	1
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]	1	NA
cysteine-type endopeptidase activity [GO:0004197]	9	5
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
cysteine-type peptidase activity [GO:0008234]	1	NA
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]	1	NA
cytokine activity [GO:0005125]; phenylpyruvate tautomerase activity [GO:0050178]	1	NA
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]	1	NA
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]	1	NA
D-ribulokinase activity [GO:0019150]	1	NA
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	1	NA
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	1	NA
deaminase activity [GO:0019239]	1	1
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]	1	NA
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	2	NA
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	1	NA
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]	1	NA
deoxyribose-phosphate aldolase activity [GO:0004139]	1	NA
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]	1	NA
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	3	1
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	1
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	1
dioxygenase activity [GO:0051213]	1	1
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]	1	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	2	NA
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]	1	NA
DNA binding [GO:0003677]	1	NA
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]	1	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	1
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	3
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	NA
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	NA
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]	1	NA
dynein complex binding [GO:0070840]	1	1
dynein intermediate chain binding [GO:0045505]	1	NA
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activator activity [GO:0061133]	1	NA
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	3
endopeptidase inhibitor activity [GO:0004866]	1	NA
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]	1	NA
endoribonuclease activity [GO:0004521]	1	NA
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	1	NA
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]	1	NA
enzyme regulator activity [GO:0030234]	2	2
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	1	NA
ER retention sequence binding [GO:0046923]	1	NA
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]	1	NA
exopolyphosphatase activity [GO:0004309]	1	NA
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	1
fatty acid binding [GO:0005504]	2	NA
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]	1	NA
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]	1	NA
ferrochelatase activity [GO:0004325]	1	NA
FFAT motif binding [GO:0033149]	1	1
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]	1	NA
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]	3	NA
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]	1	NA
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	NA
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	NA
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	NA
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]	1	NA
gamma-glutamyl-peptidase activity [GO:0034722]	1	NA
gamma-glutamylaminecyclotransferase activity [GO:0061929]	1	NA
gamma-glutamylcyclotransferase activity [GO:0003839]	1	NA
GDP-L-fucose synthase activity [GO:0050577]	1	NA
GDP-mannose 4,6-dehydratase activity [GO:0008446]	1	NA
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	5	NA
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	1	NA
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1
glucuronosyltransferase activity [GO:0015020]	2	NA
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	NA
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1
glutathione hydrolase activity [GO:0036374]	1	NA
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	3	NA
glutathione transferase activity [GO:0004364]	11	5
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	1
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	2	1
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	1
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen (starch) synthase activity [GO:0004373]	1	NA
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]	1	NA
glycosyltransferase activity [GO:0016757]	1	1
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]	1	NA
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	1
GPI anchor binding [GO:0034235]	1	NA
GTP binding [GO:0005525]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	18	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	4	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	1
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	1
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	1
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	1
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]	1	NA
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	2
heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; oxygen binding [GO:0019825]; oxygen carrier activity [GO:0005344]	2	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	NA
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	1
histone binding [GO:0042393]	3	1
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	1
Hsp90 protein binding [GO:0051879]	1	1
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	1
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	16	6
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	2	NA
hydrolase activity, acting on ester bonds [GO:0016788]	3	NA
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	3	1
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	1	NA
hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	NA
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1
hydroxyisourate hydrolase activity [GO:0033971]	1	NA
hydroxymethylbilane synthase activity [GO:0004418]	1	NA
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	1	NA
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]	1	NA
hydroxypyruvate isomerase activity [GO:0008903]	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	NA
IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	NA
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	NA
inositol-3-phosphate synthase activity [GO:0004512]	1	NA
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	2	NA
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1
iodotyrosine deiodinase activity [GO:0140616]; oxidoreductase activity [GO:0016491]	1	NA
iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-lysine 5-dioxygenase activity [GO:0008475]	1	NA
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	1	NA
juvenile-hormone esterase activity [GO:0004453]	1	NA
kinase activity [GO:0016301]	1	NA
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]	1	NA
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	NA
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	1	NA
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-lactate dehydrogenase activity [GO:0004459]	1	NA
L-malate dehydrogenase activity [GO:0030060]	2	2
L-methionine-(S)-S-oxide reductase activity [GO:0036456]; peptide-methionine (S)-S-oxide reductase activity [GO:0008113]	1	NA
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]	1	NA
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	3	2
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	1
lipid transporter activity [GO:0005319]	4	2
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
lyase activity [GO:0016829]	1	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1
lysozyme activity [GO:0003796]	2	1
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	NA
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	1	NA
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	1
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	NA
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	2
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]	1	NA
mannose binding [GO:0005537]	2	NA
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	1
metal ion binding [GO:0046872]	6	2
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	1	NA
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]	1	NA
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	4	3
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	NA
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	2	1
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	1	NA
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]	1	NA
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]	1	NA
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	1
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]	1	NA
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]	1	NA
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	1
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	2	1
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	1
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	3	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	5	2
metallodipeptidase activity [GO:0070573]	1	1
metallopeptidase activity [GO:0008237]	2	1
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]	1	NA
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	1
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]	1	NA
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1
microtubule binding [GO:0008017]	1	1
microtubule plus-end binding [GO:0051010]	1	1
molecular adaptor activity [GO:0060090]	1	NA
monooxygenase activity [GO:0004497]	1	NA
mRNA binding [GO:0003729]	7	1
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]	1	NA
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	2
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	NA
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	2	2
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	2	NA
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1
myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	3	NA
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]	1	NA
N-acetylglucosamine kinase activity [GO:0045127]	1	NA
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]	1	NA
N-acetylneuraminate lyase activity [GO:0008747]	1	NA
N-acetyltransferase activity [GO:0008080]	3	1
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]	1	NA
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	NA
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]	1	NA
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]	1	NA
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
NEDD8 activating enzyme activity [GO:0019781]	1	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	2	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	NA
nucleic acid binding [GO:0003676]	1	1
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]	1	NA
nucleoside triphosphate diphosphatase activity [GO:0047429]	1	NA
nucleotide binding [GO:0000166]	3	2
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
nucleotidyltransferase activity [GO:0016779]	1	NA
O-acyltransferase activity [GO:0008374]	1	NA
odorant binding [GO:0005549]	4	3
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]	1	NA
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	1	NA
omega-amidase activity [GO:0050152]	1	1
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]	1	NA
oxidoreductase activity [GO:0016491]	14	5
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	NA
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	NA
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	2	1
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]	1	NA
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	4	3
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	2	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	2	1
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]	1	NA
palmitoyltransferase activity [GO:0016409]	1	NA
peptidase activity [GO:0008233]	2	NA
peptide alpha-N-acetyltransferase activity [GO:0004596]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	3	1
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]	1	NA
peroxiredoxin activity [GO:0051920]	3	2
phosphatase activity [GO:0016791]	7	NA
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	NA
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]	1	NA
phosphatidylinositol binding [GO:0035091]	1	NA
phosphatidylinositol bisphosphate binding [GO:1902936]	4	3
phospholipid scramblase activity [GO:0017128]	1	NA
phosphomannomutase activity [GO:0004615]	1	NA
phosphoserine residue binding [GO:0050815]	1	1
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]	1	NA
pigment binding [GO:0031409]	1	NA
polyubiquitin modification-dependent protein binding [GO:0031593]	1	NA
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	1
protein-arginine N-methyltransferase activity [GO:0016274]	2	1
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]	1	NA
protein-containing complex binding [GO:0044877]	2	NA
protein-disulfide reductase (NAD(P)) activity [GO:0047134]	1	NA
protein-disulfide reductase activity [GO:0015035]	1	1
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]	1	NA
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	1
protein-N-terminal asparagine amidohydrolase activity [GO:0008418]	1	NA
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	1	NA
protein disulfide isomerase activity [GO:0003756]	3	2
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	NA
protein heterodimerization activity [GO:0046982]	1	NA
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]	1	NA
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein phosphatase activator activity [GO:0072542]	1	NA
protein phosphatase regulator activity [GO:0019888]	2	1
protein serine/threonine kinase activator activity [GO:0043539]	1	NA
protein tag [GO:0031386]; ubiquitin-like protein ligase binding [GO:0044389]	1	NA
protein transmembrane transporter activity [GO:0008320]	1	NA
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	NA
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	7	3
proton transmembrane transporter activity [GO:0015078]	3	3
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	NA
purine-nucleoside phosphorylase activity [GO:0004731]	1	NA
pyridoxal kinase activity [GO:0008478]	1	NA
pyridoxal phosphate binding [GO:0030170]	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyrophosphatase activity [GO:0016462]	1	NA
pyrroline-5-carboxylate reductase activity [GO:0004735]	1	NA
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
Rab geranylgeranyltransferase activity [GO:0004663]	1	NA
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	NA
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	1
ribosome binding [GO:0043022]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	2
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]	1	NA
RNA binding [GO:0003723]	15	4
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]	1	NA
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	18	16
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	1
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	2
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	1	NA
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	2
S-formylglutathione hydrolase activity [GO:0018738]	1	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	1	NA
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	1	NA
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
scavenger receptor activity [GO:0005044]	1	NA
selenium binding [GO:0008430]	1	1
sepiapterin reductase activity [GO:0004757]	1	NA
serine-type carboxypeptidase activity [GO:0004185]	1	1
serine-type endopeptidase activity [GO:0004252]	40	8
serine-type endopeptidase inhibitor activity [GO:0004867]	11	1
serine-type peptidase activity [GO:0008236]	1	NA
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	NA
signaling receptor activity [GO:0038023]	1	NA
signaling receptor binding [GO:0005102]	2	NA
signaling receptor complex adaptor activity [GO:0030159]	1	NA
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]	1	NA
single-stranded DNA binding [GO:0003697]	1	NA
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]	1	NA
SNAP receptor activity [GO:0005484]	1	NA
SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]	1	NA
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	1
snoRNA binding [GO:0030515]	2	1
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	1	NA
spermidine synthase activity [GO:0004766]	1	NA
spermine synthase activity [GO:0016768]	1	1
sterol binding [GO:0032934]	3	1
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]	1	NA
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	2	3
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	46	24
structural molecule activity [GO:0005198]	7	5
sulfotransferase activity [GO:0008146]	2	NA
sulfur dioxygenase activity [GO:0050313]	1	NA
sulfuric ester hydrolase activity [GO:0008484]	1	NA
SUMO activating enzyme activity [GO:0019948]	1	NA
thioredoxin-disulfide reductase activity [GO:0004791]	1	NA
thioredoxin peroxidase activity [GO:0008379]	1	1
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	1	NA
transaminase activity [GO:0008483]	1	NA
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]	1	NA
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	1	NA
translation elongation factor activity [GO:0003746]	3	2
translation initiation factor activity [GO:0003743]	3	NA
transmembrane transporter activity [GO:0022857]	1	NA
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
tropomyosin binding [GO:0005523]	1	NA
U1 snRNA binding [GO:0030619]	1	NA
U2 snRNA binding [GO:0030620]	1	NA
ubiquitin binding [GO:0043130]	2	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	1	NA
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1
UDP-glycosyltransferase activity [GO:0008194]	3	1
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]	2	NA
unfolded protein binding [GO:0051082]	2	2
uroporphyrinogen decarboxylase activity [GO:0004853]	1	NA
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
zinc ion binding [GO:0008270]	2	NA
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	NA	1
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	NA	1
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]	NA	1
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]	NA	1
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]	NA	1
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]	NA	1
hydro-lyase activity [GO:0016836]	NA	1
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]	NA	1
ligase activity [GO:0016874]	NA	1
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	NA	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]
2-hydroxyglutarate dehydrogenase activity [GO:0047545]
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]
3’-5’-exodeoxyribonuclease activity [GO:0008296]
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]
3-dehydrosphinganine reductase activity [GO:0047560]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
5-formyltetrahydrofolate cyclo-ligase activity [GO:0030272]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]
acetylcholinesterase activity [GO:0003990]
acid phosphatase activity [GO:0003993]
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]
acyl-CoA hydrolase activity [GO:0047617]
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]
acyltransferase activity [GO:0016746]
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]
ADP-ribose diphosphatase activity [GO:0047631]
ADP-ribosylglutamate hydrolase activity [GO:0140293]
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]
alpha,alpha-trehalase activity [GO:0004555]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
amino acid kinase activity [GO:0019202]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]
asparaginase activity [GO:0004067]; beta-aspartyl-peptidase activity [GO:0008798]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
aspartic-type endopeptidase activity [GO:0004190]
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA helicase activity [GO:0003678]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]
ATP binding [GO:0005524]; CMP kinase activity [GO:0036430]; cytidylate kinase activity [GO:0004127]; dCMP kinase activity [GO:0036431]; UMP kinase activity [GO:0033862]
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; SUMO activating enzyme activity [GO:0019948]
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]; ubiquitin protein ligase binding [GO:0031625]
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]
ATPase activator activity [GO:0001671]
beta-galactosidase activity [GO:0004565]
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]
beta-mannosidase activity [GO:0004567]
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]
box H/ACA snoRNA binding [GO:0034513]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]
calcium ion binding [GO:0005509]; laminin binding [GO:0043236]
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbonate dehydratase activity [GO:0004089]; hydro-lyase activity [GO:0016836]; zinc ion binding [GO:0008270]
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]
carnitine O-palmitoyltransferase activity [GO:0004095]
catalytic activity [GO:0003824]
catalytic activity [GO:0003824]; FAD binding [GO:0071949]
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]
cell-cell adhesion mediator activity [GO:0098632]
chaperone binding [GO:0051087]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]
chromatin binding [GO:0003682]
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]
citrate secondary active transmembrane transporter activity [GO:0071913]
clathrin adaptor activity [GO:0035615]
clathrin adaptor activity [GO:0035615]; lipid binding [GO:0008289]
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper chaperone activity [GO:0016531]; copper ion binding [GO:0005507]
copper ion binding [GO:0005507]
cullin family protein binding [GO:0097602]
cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]
cysteine-type peptidase activity [GO:0008234]
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]
cytokine activity [GO:0005125]; phenylpyruvate tautomerase activity [GO:0050178]
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]
deoxyribose-phosphate aldolase activity [GO:0004139]
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]
DNA binding [GO:0003677]
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]
dynein intermediate chain binding [GO:0045505]
endopeptidase activator activity [GO:0061133]
endopeptidase inhibitor activity [GO:0004866]
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]
endoribonuclease activity [GO:0004521]
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
ER retention sequence binding [GO:0046923]
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]
exopolyphosphatase activity [GO:0004309]
fatty acid binding [GO:0005504]
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]
ferrochelatase activity [GO:0004325]
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]
flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]
gamma-glutamyl-peptidase activity [GO:0034722]
gamma-glutamylaminecyclotransferase activity [GO:0061929]
gamma-glutamylcyclotransferase activity [GO:0003839]
GDP-L-fucose synthase activity [GO:0050577]
GDP-mannose 4,6-dehydratase activity [GO:0008446]
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glucuronosyltransferase activity [GO:0015020]
glutaminyl-peptide cyclotransferase activity [GO:0016603]
glutathione hydrolase activity [GO:0036374]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glycogen (starch) synthase activity [GO:0004373]
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]
GPI anchor binding [GO:0034235]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]
guanyl-nucleotide exchange factor activity [GO:0005085]
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
heme binding [GO:0020037]; metal ion binding [GO:0046872]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; oxygen binding [GO:0019825]; oxygen carrier activity [GO:0005344]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]
hydrolase activity, acting on ester bonds [GO:0016788]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
hydroxyisourate hydrolase activity [GO:0033971]
hydroxymethylbilane synthase activity [GO:0004418]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]
IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
inorganic phosphate transmembrane transporter activity [GO:0005315]
inositol-3-phosphate synthase activity [GO:0004512]
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]
iodotyrosine deiodinase activity [GO:0140616]; oxidoreductase activity [GO:0016491]
iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-lysine 5-dioxygenase activity [GO:0008475]
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]
juvenile-hormone esterase activity [GO:0004453]
kinase activity [GO:0016301]
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
L-lactate dehydrogenase activity [GO:0004459]
L-methionine-(S)-S-oxide reductase activity [GO:0036456]; peptide-methionine (S)-S-oxide reductase activity [GO:0008113]
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]
lyase activity [GO:0016829]
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]
mannose binding [GO:0005537]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
molecular adaptor activity [GO:0060090]
monooxygenase activity [GO:0004497]
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]
myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]
N-acetylglucosamine kinase activity [GO:0045127]
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]
N-acetylneuraminate lyase activity [GO:0008747]
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]
NEDD8 activating enzyme activity [GO:0019781]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]
nucleoside triphosphate diphosphatase activity [GO:0047429]
nucleotidyltransferase activity [GO:0016779]
O-acyltransferase activity [GO:0008374]
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]
palmitoyltransferase activity [GO:0016409]
peptidase activity [GO:0008233]
peptide alpha-N-acetyltransferase activity [GO:0004596]
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]
phosphatase activity [GO:0016791]
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]
phosphatidylinositol binding [GO:0035091]
phospholipid scramblase activity [GO:0017128]
phosphomannomutase activity [GO:0004615]
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]
pigment binding [GO:0031409]
polyubiquitin modification-dependent protein binding [GO:0031593]
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]
protein-containing complex binding [GO:0044877]
protein-disulfide reductase (NAD(P)) activity [GO:0047134]
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]
protein-N-terminal asparagine amidohydrolase activity [GO:0008418]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]
protein heterodimerization activity [GO:0046982]
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]
protein phosphatase activator activity [GO:0072542]
protein serine/threonine kinase activator activity [GO:0043539]
protein tag [GO:0031386]; ubiquitin-like protein ligase binding [GO:0044389]
protein transmembrane transporter activity [GO:0008320]
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]
purine-nucleoside phosphorylase activity [GO:0004731]
pyridoxal kinase activity [GO:0008478]
pyrophosphatase activity [GO:0016462]
pyrroline-5-carboxylate reductase activity [GO:0004735]
Rab geranylgeranyltransferase activity [GO:0004663]
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]
ribosome binding [GO:0043022]
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
scavenger receptor activity [GO:0005044]
sepiapterin reductase activity [GO:0004757]
serine-type peptidase activity [GO:0008236]
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]
signaling receptor activity [GO:0038023]
signaling receptor binding [GO:0005102]
signaling receptor complex adaptor activity [GO:0030159]
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]
single-stranded DNA binding [GO:0003697]
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]
SNAP receptor activity [GO:0005484]
SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]
spermidine synthase activity [GO:0004766]
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]
sulfotransferase activity [GO:0008146]
sulfur dioxygenase activity [GO:0050313]
sulfuric ester hydrolase activity [GO:0008484]
SUMO activating enzyme activity [GO:0019948]
thioredoxin-disulfide reductase activity [GO:0004791]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transaminase activity [GO:0008483]
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
translation initiation factor activity [GO:0003743]
transmembrane transporter activity [GO:0022857]
tropomyosin binding [GO:0005523]
U1 snRNA binding [GO:0030619]
U2 snRNA binding [GO:0030620]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]
uroporphyrinogen decarboxylase activity [GO:0004853]
zinc ion binding [GO:0008270]

kable(BP[is.na(BP[,2])==TRUE,1])

x
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]
chromatin binding [GO:0003682]; histone binding [GO:0042393]; RNA binding [GO:0003723]
clathrin heavy chain binding [GO:0032050]; structural molecule activity [GO:0005198]
dihydropyrimidine dehydrogenase (NADP+) activity [GO:0017113]; iron-sulfur cluster binding [GO:0051536]; NADP binding [GO:0050661]; uracil binding [GO:0002058]
Hsp70 protein binding [GO:0030544]; protein dimerization activity [GO:0046983]
hydro-lyase activity [GO:0016836]
K48-linked polyubiquitin modification-dependent protein binding [GO:0036435]
ligase activity [GO:0016874]
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]

################################# cellular compartmnet
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_cc <- c(results_comp_cc, tmp/(length(BP[,1])))
name_comp_cc <- c(name_comp_cc,"graph3B-pool+fracD1","graph3B-onlyFracD1","graph3B-onlyPoolD1")
kable(BP)

Var1	Freq.x	Freq.y
6-phosphofructokinase complex [GO:0005945]	1	1
actin cytoskeleton [GO:0015629]; adherens junction [GO:0005912]; cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	NA
actin cytoskeleton [GO:0015629]; cytoplasm [GO:0005737]	2	1
actin filament [GO:0005884]	1	2
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]	1	NA
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]	1	1
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]	1	NA
adherens junction [GO:0005912]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	NA
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]	2	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	NA
AP-2 adaptor complex [GO:0030122]	1	NA
AP-2 adaptor complex [GO:0030122]; cytoplasmic vesicle [GO:0031410]	1	NA
AP-2 adaptor complex [GO:0030122]; intracellular membrane-bounded organelle [GO:0043231]	1	NA
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]	1	1
Arp2/3 protein complex [GO:0005885]	1	1
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]	4	NA
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]	1	NA
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]	1	NA
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]	1	NA
axon [GO:0030424]; plasma membrane [GO:0005886]	1	NA
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]	1	NA
axoneme [GO:0005930]	1	NA
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]	1	NA
basement membrane [GO:0005604]	2	NA
basement membrane [GO:0005604]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	1
basement membrane [GO:0005604]; membrane [GO:0016020]	1	NA
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]	1	NA
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]	1	1
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]	1	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]	2	1
box H/ACA snoRNP complex [GO:0031429]	2	NA
calcineurin complex [GO:0005955]	1	NA
cAMP-dependent protein kinase complex [GO:0005952]	2	1
catalytic step 2 spliceosome [GO:0071013]	1	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; cytosol [GO:0005829]; precatalytic spliceosome [GO:0071011]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]	1	NA
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	1	NA
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]	1	NA
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]	1	NA
catenin complex [GO:0016342]	1	NA
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]	1	NA
cell-cell junction [GO:0005911]; plasma membrane [GO:0005886]	1	1
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	2	NA
cell cortex [GO:0005938]; clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]; clathrin-coated endocytic vesicle [GO:0045334]	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	1	NA
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]	1	1
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]	1	1
cell projection [GO:0042995]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
cellular anatomical entity [GO:0110165]	5	NA
chaperonin-containing T-complex [GO:0005832]	4	4
chitin-based extracellular matrix [GO:0062129]	2	3
chromatin [GO:0000785]; nucleolus [GO:0005730]	1	NA
chromatin [GO:0000785]; nucleus [GO:0005634]	2	1
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	1	NA
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]	1	NA
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]	1	NA
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]	1	1
clathrin adaptor complex [GO:0030131]	1	NA
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]	1	NA
clathrin vesicle coat [GO:0030125]	1	NA
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA
collagen-containing extracellular matrix [GO:0062023]	1	NA
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]	3	NA
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	1	1
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]	4	2
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]	2	NA
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	2	NA
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]	2	2
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]	1	NA
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]	1	NA
cortical actin cytoskeleton [GO:0030864]	1	1
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]	1	NA
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]	1	NA
cytoplasm [GO:0005737]	116	59
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]	1	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]	1	1
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; dystroglycan complex [GO:0016011]; extracellular space [GO:0005615]; nucleoplasm [GO:0005654]; postsynaptic membrane [GO:0045211]; sarcolemma [GO:0042383]	1	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; myosin complex [GO:0016459]; sarcomere [GO:0030017]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]	2	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]	1	NA
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]	2	1
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]	1	NA
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]	1	NA
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]	1	NA
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	2	NA
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]	1	NA
cytoplasm [GO:0005737]; intracellular membrane-bounded organelle [GO:0043231]	2	1
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]	1	1
cytoplasm [GO:0005737]; lysosome [GO:0005764]	4	1
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]	1	NA
cytoplasm [GO:0005737]; membrane [GO:0016020]	2	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]	1	NA
cytoplasm [GO:0005737]; microtubule [GO:0005874]	2	2
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]	1	1
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]	1	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]	5	4
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]	1	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]	1	NA
cytoplasm [GO:0005737]; myosin complex [GO:0016459]	1	NA
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]	1	NA
cytoplasm [GO:0005737]; myosin II complex [GO:0016460]	1	1
cytoplasm [GO:0005737]; nascent polypeptide-associated complex [GO:0005854]	1	1
cytoplasm [GO:0005737]; NatA complex [GO:0031415]	1	NA
cytoplasm [GO:0005737]; neuron projection [GO:0043005]	1	NA
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]	2	NA
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]	1	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]	1	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]	18	5
cytoplasm [GO:0005737]; nucleus [GO:0005634]; polysome [GO:0005844]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	5	3
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	2	2
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	NA
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]	2	1
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]	3	3
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]	1	1
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]	1	NA
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA
cytoplasm [GO:0005737]; ribose phosphate diphosphokinase complex [GO:0002189]	2	1
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]	2	NA
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]	1	1
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]	1	NA
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]	1	NA
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]	1	NA
cytoskeleton [GO:0005856]	1	NA
cytoskeleton [GO:0005856]; membrane [GO:0016020]	1	1
cytosol [GO:0005829]	45	27
cytosol [GO:0005829]; cytosolic small ribosomal subunit [GO:0022627]	1	1
cytosol [GO:0005829]; early endosome [GO:0005769]; endomembrane system [GO:0012505]; phagocytic vesicle [GO:0045335]	1	NA
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	NA
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]	1	1
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]	1	NA
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]	1	NA
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]	1	NA
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]	1	1
cytosol [GO:0005829]; membrane [GO:0016020]; mitochondrion [GO:0005739]	1	NA
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]	5	4
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]	12	3
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; ribosome [GO:0005840]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; RISC complex [GO:0016442]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	1
cytosol [GO:0005829]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; protein-containing complex [GO:0032991]	1	1
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]	1	NA
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]	1	1
cytosolic large ribosomal subunit [GO:0022625]	30	24
cytosolic large ribosomal subunit [GO:0022625]; large ribosomal subunit [GO:0015934]	1	1
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]	1	1
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	1	1
cytosolic small ribosomal subunit [GO:0022627]	13	10
cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]	1	NA
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]	1	1
cytosolic small ribosomal subunit [GO:0022627]; small-subunit processome [GO:0032040]	1	1
cytosolic small ribosomal subunit [GO:0022627]; small ribosomal subunit [GO:0015935]	2	2
dendrite [GO:0030425]	1	NA
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]	1	1
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]	1	1
DNA replication factor A complex [GO:0005662]	1	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	1
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]	1	NA
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]	1	NA
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]	2	NA
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]	1	NA
early endosome membrane [GO:0031901]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; membrane [GO:0016020]; multivesicular body membrane [GO:0032585]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]; transport vesicle membrane [GO:0030658]	1	NA
EKC/KEOPS complex [GO:0000408]	1	NA
elongator holoenzyme complex [GO:0033588]	1	NA
elongin complex [GO:0070449]	1	1
endomembrane system [GO:0012505]	2	1
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]	1	NA
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]	1	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]	1	NA
endopeptidase Clp complex [GO:0009368]	1	NA
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	1
endoplasmic reticulum [GO:0005783]	4	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]	1	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum lumen [GO:0005788]	3	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	2	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]	1	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]	1	1
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]	2	NA
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	2	1
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]	1	1
endoplasmic reticulum chaperone complex [GO:0034663]	1	1
endoplasmic reticulum lumen [GO:0005788]	4	3
endoplasmic reticulum lumen [GO:0005788]; endoplasmic reticulum membrane [GO:0005789]	1	1
endoplasmic reticulum membrane [GO:0005789]	15	2
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	NA
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; endoplasmic reticulum-Golgi intermediate compartment membrane [GO:0033116]; ER to Golgi transport vesicle membrane [GO:0012507]; Golgi membrane [GO:0000139]; melanosome [GO:0042470]; SNARE complex [GO:0031201]	1	NA
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]	1	NA
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]	2	1
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	1	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]	1	NA
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]	1	NA
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]	1	1
endosome [GO:0005768]; Golgi apparatus [GO:0005794]; insulin-responsive compartment [GO:0032593]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]; synaptic vesicle [GO:0008021]	1	NA
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]	1	NA
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]	1	NA
ESC/E(Z) complex [GO:0035098]; nucleus [GO:0005634]; NuRD complex [GO:0016581]	1	NA
ESCRT I complex [GO:0000813]	1	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]	5	4
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]	1	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]	1	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]	1	NA
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]	1	1
eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1
eukaryotic translation initiation factor 2B complex [GO:0005851]	2	NA
eukaryotic translation initiation factor 4F complex [GO:0016281]	2	NA
external side of plasma membrane [GO:0009897]	1	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]	1	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	NA
extracellular region [GO:0005576]	22	9
extracellular region [GO:0005576]; membrane [GO:0016020]	2	NA
extracellular space [GO:0005615]	36	9
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]	1	NA
extracellular space [GO:0005615]; lysosome [GO:0005764]	12	8
extracellular space [GO:0005615]; membrane [GO:0016020]	4	1
extracellular space [GO:0005615]; plasma membrane [GO:0005886]	1	1
F-actin capping protein complex [GO:0008290]	1	NA
GET complex [GO:0043529]	1	NA
glutamate-cysteine ligase complex [GO:0017109]	2	1
glycerol-3-phosphate dehydrogenase complex [GO:0009331]	2	2
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1
GMP reductase complex [GO:1902560]	1	1
Golgi apparatus [GO:0005794]	1	NA
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	1	1
Golgi membrane [GO:0000139]	1	NA
Golgi stack [GO:0005795]	1	NA
heterotrimeric G-protein complex [GO:0005834]	2	NA
Ino80 complex [GO:0031011]; NuA4 histone acetyltransferase complex [GO:0035267]; R2TP complex [GO:0097255]; Swr1 complex [GO:0000812]	2	NA
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]	1	1
intracellular membrane-bounded organelle [GO:0043231]	2	2
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]	1	NA
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]	1	1
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]	4	NA
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]	1	1
intracellular non-membrane-bounded organelle [GO:0043232]	1	1
intracellular organelle [GO:0043229]	4	3
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]	1	NA
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]	1	NA
laminin complex [GO:0043256]	1	NA
late endosome [GO:0005770]; lysosome [GO:0005764]; phagocytic vesicle [GO:0045335]	1	NA
lipid droplet [GO:0005811]; membrane [GO:0016020]	2	1
lysosome [GO:0005764]	6	2
lysosome [GO:0005764]; membrane [GO:0016020]	2	1
lysosome [GO:0005764]; vacuole [GO:0005773]	1	NA
membrane [GO:0016020]	44	8
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]	1	NA
membrane [GO:0016020]; mitochondrion [GO:0005739]	5	2
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	NA
membrane [GO:0016020]; peroxisome [GO:0005777]	3	2
membrane [GO:0016020]; plasma membrane [GO:0005886]	4	2
membrane [GO:0016020]; protein-containing complex [GO:0032991]	1	NA
membrane [GO:0016020]; SAM complex [GO:0001401]	1	NA
membrane [GO:0016020]; sarcoplasmic reticulum membrane [GO:0033017]	1	1
membrane [GO:0016020]; spectrin [GO:0008091]	1	1
membrane [GO:0016020]; synapse [GO:0045202]	1	1
membrane [GO:0016020]; trans-Golgi network [GO:0005802]	1	NA
membrane [GO:0016020]; TRC complex [GO:0072380]	1	NA
MICOS complex [GO:0061617]	1	NA
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]	1	NA
mitochondrial fatty acid beta-oxidation multienzyme complex [GO:0016507]	1	1
mitochondrial inner membrane [GO:0005743]	8	2
mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]	1	NA
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]	2	1
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	1
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]	1	1
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]	1	NA
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]	1	NA
mitochondrial intermembrane space [GO:0005758]; respirasome [GO:0070469]	1	1
mitochondrial large ribosomal subunit [GO:0005762]	7	1
mitochondrial matrix [GO:0005759]	7	6
mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]	1	NA
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]	1	NA
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]	1	NA
mitochondrial outer membrane [GO:0005741]	2	NA
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]	1	NA
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]	1	1
mitochondrial outer membrane translocase complex [GO:0005742]	1	NA
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	1	1
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]	2	2
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	2	1
mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase, stator stalk [GO:0000274]	1	1
mitochondrial pyruvate dehydrogenase complex [GO:0005967]	1	1
mitochondrial respiratory chain complex I [GO:0005747]	17	3
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) [GO:0005749]	1	1
mitochondrial respiratory chain complex III [GO:0005750]	4	3
mitochondrial respiratory chain complex IV [GO:0005751]	6	2
mitochondrial ribonuclease P complex [GO:0030678]	1	1
mitochondrial ribosome [GO:0005761]	1	NA
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]	1	NA
mitochondrial small ribosomal subunit [GO:0005763]	10	1
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]	1	NA
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]	1	NA
mitochondrion [GO:0005739]	54	30
mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]	5	3
mitochondrion [GO:0005739]; peroxisome [GO:0005777]	7	3
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]	1	NA
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	5	NA
mitochondrion [GO:0005739]; ribosome [GO:0005840]	2	NA
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]	1	1
mitochondrion [GO:0005739]; succinate-CoA ligase complex [GO:0042709]	2	2
mitochondrion [GO:0005739]; tricarboxylic acid cycle enzyme complex [GO:0045239]	1	1
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]	1	NA
myosin filament [GO:0032982]; myosin II complex [GO:0016460]; sarcomere [GO:0030017]	1	1
NatB complex [GO:0031416]	1	NA
neuron projection [GO:0043005]	1	NA
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]	1	NA
nuclear outer membrane [GO:0005640]	1	NA
nuclear pore outer ring [GO:0031080]	1	NA
nuclear speck [GO:0016607]	2	1
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]	1	NA
nucleoplasm [GO:0005654]	2	NA
nucleosome [GO:0000786]; nucleus [GO:0005634]	3	3
nucleus [GO:0005634]	21	7
nucleus [GO:0005634]; P-body [GO:0000932]	1	NA
nucleus [GO:0005634]; P granule [GO:0043186]	1	1
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	1	1
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]	3	3
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]	1	1
nucleus [GO:0005634]; U2 snRNP [GO:0005686]	1	NA
nucleus [GO:0005634]; ubiquitin ligase complex [GO:0000151]	1	NA
nucleus [GO:0005634]; Z disc [GO:0030018]	1	1
oligosaccharyltransferase complex [GO:0008250]	5	3
P-body [GO:0000932]	1	NA
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]	1	NA
P granule [GO:0043186]	1	1
peroxisome [GO:0005777]	14	9
phenylalanine-tRNA ligase complex [GO:0009328]	1	1
phosphopyruvate hydratase complex [GO:0000015]	1	1
plasma membrane [GO:0005886]	19	4
proteasome complex [GO:0000502]	1	NA
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]	1	1
proteasome regulatory particle [GO:0005838]	1	1
proteasome regulatory particle, lid subcomplex [GO:0008541]	3	3
proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178]	1	1
proton-transporting V-type ATPase complex [GO:0033176]	1	NA
proton-transporting V-type ATPase, V1 domain [GO:0033180]	1	1
Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA
Ragulator complex [GO:0071986]	1	NA
ribonucleoprotein complex [GO:1990904]	3	2
ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	7	4
RNA polymerase I complex [GO:0005736]; RNA polymerase II, core complex [GO:0005665]; RNA polymerase III complex [GO:0005666]	2	NA
sarcoplasmic reticulum membrane [GO:0033017]	1	NA
SCF ubiquitin ligase complex [GO:0019005]	1	NA
Sec61 translocon complex [GO:0005784]	1	NA
signal peptidase complex [GO:0005787]	1	NA
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	NA
SNARE complex [GO:0031201]	1	NA
sodium:potassium-exchanging ATPase complex [GO:0005890]	2	NA
spliceosomal complex [GO:0005681]	1	NA
synapse [GO:0045202]	1	NA
TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]	1	NA
translation release factor complex [GO:0018444]	1	1
tRNA-splicing ligase complex [GO:0072669]	2	NA
troponin complex [GO:0005861]	5	4
U1 snRNP [GO:0005685]	1	NA
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]	1	NA
vacuolar proton-transporting V-type ATPase complex [GO:0016471]	2	NA
vacuolar proton-transporting V-type ATPase, V1 domain [GO:0000221]	3	3
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	NA
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]	NA	1
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]	NA	1
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	NA	1
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]	NA	1
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]	NA	1
cytoskeleton [GO:0005856]; cytosol [GO:0005829]	NA	1
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]	NA	1
mediator complex [GO:0016592]; mitochondrion [GO:0005739]	NA	1
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]	NA	1
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]	NA	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	NA	1
nucleus [GO:0005634]; site of double-strand break [GO:0035861]	NA	1
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
actin cytoskeleton [GO:0015629]; adherens junction [GO:0005912]; cytoplasm [GO:0005737]; plasma membrane [GO:0005886]
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; nucleus [GO:0005634]
AP-2 adaptor complex [GO:0030122]
AP-2 adaptor complex [GO:0030122]; cytoplasmic vesicle [GO:0031410]
AP-2 adaptor complex [GO:0030122]; intracellular membrane-bounded organelle [GO:0043231]
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]
axon [GO:0030424]; plasma membrane [GO:0005886]
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]
axoneme [GO:0005930]
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]
basement membrane [GO:0005604]
basement membrane [GO:0005604]; membrane [GO:0016020]
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]
box H/ACA snoRNP complex [GO:0031429]
calcineurin complex [GO:0005955]
catalytic step 2 spliceosome [GO:0071013]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; cytosol [GO:0005829]; precatalytic spliceosome [GO:0071011]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]
catenin complex [GO:0016342]
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]
cellular anatomical entity [GO:0110165]
chromatin [GO:0000785]; nucleolus [GO:0005730]
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]
clathrin adaptor complex [GO:0030131]
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]
clathrin vesicle coat [GO:0030125]
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]
collagen-containing extracellular matrix [GO:0062023]
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; dystroglycan complex [GO:0016011]; extracellular space [GO:0005615]; nucleoplasm [GO:0005654]; postsynaptic membrane [GO:0045211]; sarcolemma [GO:0042383]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]
cytoplasm [GO:0005737]; myosin complex [GO:0016459]
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]
cytoplasm [GO:0005737]; NatA complex [GO:0031415]
cytoplasm [GO:0005737]; neuron projection [GO:0043005]
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]
cytoskeleton [GO:0005856]
cytosol [GO:0005829]; early endosome [GO:0005769]; endomembrane system [GO:0012505]; phagocytic vesicle [GO:0045335]
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]
cytosol [GO:0005829]; endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]
cytosol [GO:0005829]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]
dendrite [GO:0030425]
DNA replication factor A complex [GO:0005662]
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]
early endosome membrane [GO:0031901]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; membrane [GO:0016020]; multivesicular body membrane [GO:0032585]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]; transport vesicle membrane [GO:0030658]
EKC/KEOPS complex [GO:0000408]
elongator holoenzyme complex [GO:0033588]
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]
endomembrane system [GO:0012505]; membrane [GO:0016020]
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]
endopeptidase Clp complex [GO:0009368]
endoplasmic reticulum [GO:0005783]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; endoplasmic reticulum-Golgi intermediate compartment membrane [GO:0033116]; ER to Golgi transport vesicle membrane [GO:0012507]; Golgi membrane [GO:0000139]; melanosome [GO:0042470]; SNARE complex [GO:0031201]
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]
endosome [GO:0005768]; Golgi apparatus [GO:0005794]; insulin-responsive compartment [GO:0032593]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]; synaptic vesicle [GO:0008021]
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]
ESC/E(Z) complex [GO:0035098]; nucleus [GO:0005634]; NuRD complex [GO:0016581]
ESCRT I complex [GO:0000813]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]
eukaryotic translation initiation factor 2B complex [GO:0005851]
eukaryotic translation initiation factor 4F complex [GO:0016281]
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]
extracellular region [GO:0005576]; membrane [GO:0016020]
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]
F-actin capping protein complex [GO:0008290]
GET complex [GO:0043529]
Golgi apparatus [GO:0005794]
Golgi membrane [GO:0000139]
Golgi stack [GO:0005795]
heterotrimeric G-protein complex [GO:0005834]
Ino80 complex [GO:0031011]; NuA4 histone acetyltransferase complex [GO:0035267]; R2TP complex [GO:0097255]; Swr1 complex [GO:0000812]
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]
laminin complex [GO:0043256]
late endosome [GO:0005770]; lysosome [GO:0005764]; phagocytic vesicle [GO:0045335]
lysosome [GO:0005764]; vacuole [GO:0005773]
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
membrane [GO:0016020]; protein-containing complex [GO:0032991]
membrane [GO:0016020]; SAM complex [GO:0001401]
membrane [GO:0016020]; trans-Golgi network [GO:0005802]
membrane [GO:0016020]; TRC complex [GO:0072380]
MICOS complex [GO:0061617]
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]
mitochondrial outer membrane [GO:0005741]
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]
mitochondrial outer membrane translocase complex [GO:0005742]
mitochondrial ribosome [GO:0005761]
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]
mitochondrion [GO:0005739]; ribosome [GO:0005840]
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]
NatB complex [GO:0031416]
neuron projection [GO:0043005]
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]
nuclear outer membrane [GO:0005640]
nuclear pore outer ring [GO:0031080]
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]
nucleoplasm [GO:0005654]
nucleus [GO:0005634]; P-body [GO:0000932]
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
nucleus [GO:0005634]; U2 snRNP [GO:0005686]
nucleus [GO:0005634]; ubiquitin ligase complex [GO:0000151]
P-body [GO:0000932]
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]
proteasome complex [GO:0000502]
proton-transporting V-type ATPase complex [GO:0033176]
Rab-protein geranylgeranyltransferase complex [GO:0005968]
Ragulator complex [GO:0071986]
RNA polymerase I complex [GO:0005736]; RNA polymerase II, core complex [GO:0005665]; RNA polymerase III complex [GO:0005666]
sarcoplasmic reticulum membrane [GO:0033017]
SCF ubiquitin ligase complex [GO:0019005]
Sec61 translocon complex [GO:0005784]
signal peptidase complex [GO:0005787]
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
SNARE complex [GO:0031201]
sodium:potassium-exchanging ATPase complex [GO:0005890]
spliceosomal complex [GO:0005681]
synapse [GO:0045202]
TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]
tRNA-splicing ligase complex [GO:0072669]
U1 snRNP [GO:0005685]
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]
vacuolar proton-transporting V-type ATPase complex [GO:0016471]
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]

kable(BP[is.na(BP[,2])==TRUE,1])

x
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]
clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin vesicle coat [GO:0030125]; plasma membrane [GO:0005886]; postsynaptic endocytic zone cytoplasmic component [GO:0099631]; synaptic vesicle membrane [GO:0030672]
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; nucleolus [GO:0005730]; nucleoplasm [GO:0005654]
cytoskeleton [GO:0005856]; cytosol [GO:0005829]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]; extracellular region [GO:0005576]; Golgi apparatus [GO:0005794]; melanosome [GO:0042470]; sarcoplasmic reticulum lumen [GO:0033018]
mediator complex [GO:0016592]; mitochondrion [GO:0005739]
methylcrotonoyl-CoA carboxylase complex [GO:1905202]; mitochondrion [GO:0005739]
mitochondrial oxoglutarate dehydrogenase complex [GO:0009353]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]
nucleus [GO:0005634]; site of double-strand break [GO:0035861]
precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]

################################# biological process
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..biological.process.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..biological.process.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_bp <- c(results_comp_bp, tmp/(length(BP[,1])))
name_comp_bp <- c(name_comp_bp,"graph3B-pool+fracD1","graph3B-onlyFracD1","graph3B-onlyPoolD1")
kable(BP)

Var1	Freq.x	Freq.y
‘de novo’ AMP biosynthetic process [GO:0044208]; ‘de novo’ IMP biosynthetic process [GO:0006189]	1	1
‘de novo’ AMP biosynthetic process [GO:0044208]; IMP metabolic process [GO:0046040]	1	1
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]	1	NA
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]; GDP-mannose metabolic process [GO:0019673]	1	NA
‘de novo’ IMP biosynthetic process [GO:0006189]; adenine biosynthetic process [GO:0046084]; purine nucleotide biosynthetic process [GO:0006164]	1	1
‘de novo’ IMP biosynthetic process [GO:0006189]; glutamine metabolic process [GO:0006541]	1	1
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; citrulline biosynthetic process [GO:0019240]; glutamine metabolic process [GO:0006541]; nitrogen compound metabolic process [GO:0006807]; UTP biosynthetic process [GO:0006228]	1	NA
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]; UMP biosynthetic process [GO:0006222]	1	NA
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; CDP biosynthetic process [GO:0046705]; phosphorylation [GO:0016310]; UDP biosynthetic process [GO:0006225]	1	NA
[2Fe-2S] cluster assembly [GO:0044571]; iron-sulfur cluster assembly [GO:0016226]	1	NA
3’-phosphoadenosine 5’-phosphosulfate biosynthetic process [GO:0050428]; sulfate assimilation [GO:0000103]	1	1
3-keto-sphinganine metabolic process [GO:0006666]; sphingolipid biosynthetic process [GO:0030148]	1	NA
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; phosphorylation [GO:0016310]; purine nucleotide biosynthetic process [GO:0006164]; ribonucleoside monophosphate biosynthetic process [GO:0009156]	1	1
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]	1	NA
acetate metabolic process [GO:0006083]	1	1
acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA biosynthetic process from acetate [GO:0019427]; bioluminescence [GO:0008218]	1	1
acetyl-CoA biosynthetic process [GO:0006085]; citrate metabolic process [GO:0006101]; fatty acid biosynthetic process [GO:0006633]; tricarboxylic acid cycle [GO:0006099]	1	1
acetyl-CoA biosynthetic process from pyruvate [GO:0006086]	2	2
acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]	1	NA
actin cytoskeleton organization [GO:0030036]	2	2
actin cytoskeleton organization [GO:0030036]; anatomical structure morphogenesis [GO:0009653]; Cdc42 protein signal transduction [GO:0032488]; endocytosis [GO:0006897]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]	1	NA
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]	1	NA
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]; cell morphogenesis [GO:0000902]; negative regulation of filopodium assembly [GO:0051490]; regulation of lamellipodium assembly [GO:0010591]	1	NA
actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]	2	1
actin filament bundle assembly [GO:0051017]	1	1
actin filament bundle assembly [GO:0051017]; cell migration [GO:0016477]; establishment or maintenance of cell polarity [GO:0007163]	1	NA
actin filament capping [GO:0051693]	1	1
actin filament debranching [GO:0071846]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; regulation of cellular component biogenesis [GO:0044087]	1	NA
actin filament depolymerization [GO:0030042]; barbed-end actin filament capping [GO:0051016]; positive regulation of neuron projection development [GO:0010976]; regulation of lamellipodium assembly [GO:0010591]; sequestering of actin monomers [GO:0042989]	1	NA
actin filament depolymerization [GO:0030042]; locomotion [GO:0040011]; positive regulation of actin filament depolymerization [GO:0030836]; sarcomere organization [GO:0045214]	1	1
actin filament organization [GO:0007015]	1	2
actin filament organization [GO:0007015]; animal organ morphogenesis [GO:0009887]; cell adhesion [GO:0007155]; clathrin coat assembly [GO:0048268]; endocytosis [GO:0006897]; neuron differentiation [GO:0030182]	1	1
actin filament organization [GO:0007015]; cell migration [GO:0016477]; cortical cytoskeleton organization [GO:0030865]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	1	NA
actin filament organization [GO:0007015]; cortical cytoskeleton organization [GO:0030865]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; motor neuron axon guidance [GO:0008045]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	1	NA
actin filament organization [GO:0007015]; muscle contraction [GO:0006936]	1	2
actin filament polymerization [GO:0030041]; Arp2/3 complex-mediated actin nucleation [GO:0034314]	2	NA
actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; lysosomal transport [GO:0007041]	1	1
activation of GTPase activity [GO:0090630]; nucleocytoplasmic transport [GO:0006913]; signal transduction [GO:0007165]	1	1
actomyosin structure organization [GO:0031032]	1	1
actomyosin structure organization [GO:0031032]; animal organ morphogenesis [GO:0009887]; neuron differentiation [GO:0030182]	1	1
acyl-CoA metabolic process [GO:0006637]	1	NA
adenine salvage [GO:0006168]; AMP salvage [GO:0044209]; purine ribonucleoside salvage [GO:0006166]	1	NA
adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]	1	NA
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]	1	NA
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]	1	NA
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; ATP metabolic process [GO:0046034]; phosphorylation [GO:0016310]	1	1
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; GTP metabolic process [GO:0046039]; ITP metabolic process [GO:0046041]; nucleoside triphosphate biosynthetic process [GO:0009142]; phosphorylation [GO:0016310]	1	NA
aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	NA
aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	NA
aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]	1	NA
alanyl-tRNA aminoacylation [GO:0006419]; tRNA modification [GO:0006400]	1	1
alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA splicing, via spliceosome [GO:0000398]	1	NA
amino acid catabolic process [GO:0009063]; carbohydrate catabolic process [GO:0016052]	1	1
amino acid metabolic process [GO:0006520]	3	2
amino acid metabolic process [GO:0006520]; biosynthetic process [GO:0009058]	1	1
amino acid metabolic process [GO:0006520]; catecholamine metabolic process [GO:0006584]; serotonin biosynthetic process [GO:0042427]	1	NA
amino acid transport [GO:0006865]; carbohydrate metabolic process [GO:0005975]	1	NA
ammonia assimilation cycle [GO:0019676]; glutamate biosynthetic process [GO:0006537]; L-glutamate biosynthetic process [GO:0097054]	1	1
AMP biosynthetic process [GO:0006167]; ATP biosynthetic process [GO:0006754]	1	NA
AMP catabolic process [GO:0006196]	1	NA
AMP salvage [GO:0044209]; phosphorylation [GO:0016310]; purine nucleobase metabolic process [GO:0006144]; purine ribonucleoside salvage [GO:0006166]	1	NA
anatomical structure development [GO:0048856]	1	NA
anatomical structure morphogenesis [GO:0009653]; animal organ development [GO:0048513]; cell differentiation [GO:0030154]; cellular component organization [GO:0016043]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]	4	NA
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; cell-cell adhesion [GO:0098609]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; protein phosphorylation [GO:0006468]	3	2
androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]	1	1
animal organ development [GO:0048513]; cell adhesion [GO:0007155]; integrin-mediated signaling pathway [GO:0007229]; system development [GO:0048731]	1	NA
animal organ development [GO:0048513]; cell development [GO:0048468]; cell migration [GO:0016477]; morphogenesis of an epithelium [GO:0002009]; signal transduction [GO:0007165]	1	NA
animal organ development [GO:0048513]; cell morphogenesis involved in differentiation [GO:0000904]; cellular component organization [GO:0016043]; system development [GO:0048731]	1	NA
animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; tissue development [GO:0009888]	1	NA
animal organ morphogenesis [GO:0009887]; basement membrane assembly [GO:0070831]; cell migration [GO:0016477]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]	1	NA
animal organ morphogenesis [GO:0009887]; cell-cell adhesion via plasma-membrane adhesion molecules [GO:0098742]; cellular component organization [GO:0016043]; establishment of planar polarity [GO:0001736]; establishment or maintenance of cell polarity [GO:0007163]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	NA
animal organ morphogenesis [GO:0009887]; cell migration [GO:0016477]; cellular component organization [GO:0016043]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]	1	NA
anterograde axonal transport [GO:0008089]; protein transport [GO:0015031]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]	1	NA
anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; axon guidance [GO:0007411]; cytoskeleton-dependent intracellular transport [GO:0030705]; microtubule-based movement [GO:0007018]; synaptic vesicle transport [GO:0048489]	1	1
apoptotic mitochondrial changes [GO:0008637]; mitochondrial unfolded protein response [GO:0034514]; protein folding [GO:0006457]; protein import into mitochondrial intermembrane space [GO:0045041]; protein refolding [GO:0042026]	1	1
apoptotic process [GO:0006915]	1	NA
apoptotic process [GO:0006915]; cell differentiation [GO:0030154]	1	NA
arginine catabolic process to glutamate [GO:0019544]; arginine catabolic process to proline via ornithine [GO:0010121]; L-proline biosynthetic process [GO:0055129]	1	1
arginyl-tRNA aminoacylation [GO:0006420]	1	1
aromatic compound catabolic process [GO:0019439]; epoxide metabolic process [GO:0097176]	3	1
Arp2/3 complex-mediated actin nucleation [GO:0034314]	2	1
Arp2/3 complex-mediated actin nucleation [GO:0034314]; cell migration [GO:0016477]; regulation of actin filament polymerization [GO:0030833]	1	NA
Arp2/3 complex-mediated actin nucleation [GO:0034314]; regulation of actin filament polymerization [GO:0030833]	1	NA
asparagine biosynthetic process [GO:0006529]; glutamine metabolic process [GO:0006541]; L-asparagine biosynthetic process [GO:0070981]	1	NA
asparagine catabolic process via L-aspartate [GO:0033345]	1	NA
asparagine metabolic process [GO:0006528]; glutamine metabolic process [GO:0006541]; oxaloacetate metabolic process [GO:0006107]	1	1
aspartate catabolic process [GO:0006533]; biosynthetic process [GO:0009058]	1	1
aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]	1	NA
aspartyl-tRNA aminoacylation [GO:0006422]	1	NA
ATP metabolic process [GO:0046034]; nucleoside diphosphate phosphorylation [GO:0006165]; nucleoside triphosphate biosynthetic process [GO:0009142]	1	1
ATP metabolic process [GO:0046034]; vacuolar acidification [GO:0007035]	1	1
ATP synthesis coupled electron transport [GO:0042773]	2	2
autophagosome assembly [GO:0000045]; autophagy of mitochondrion [GO:0000422]; cellular response to nitrogen starvation [GO:0006995]; macroautophagy [GO:0016236]	1	NA
autophagosome assembly [GO:0000045]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; nuclear membrane reassembly [GO:0031468]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	NA
autophagosome assembly [GO:0000045]; intracellular protein transport [GO:0006886]	1	1
autophagosome maturation [GO:0097352]; ER-associated misfolded protein catabolic process [GO:0071712]; mitotic spindle disassembly [GO:0051228]; retrograde protein transport, ER to cytosol [GO:0030970]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
autophagy [GO:0006914]; response to starvation [GO:0042594]	1	NA
autophagy of mitochondrion [GO:0000422]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; peroxisome fission [GO:0016559]	1	NA
axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	NA
axon guidance [GO:0007411]; morphogenesis of an epithelium [GO:0002009]; nerve development [GO:0021675]	1	NA
beta-alanine biosynthetic process via 3-ureidopropionate [GO:0033396]	1	1
bicoid mRNA localization [GO:0045450]	1	NA
bioluminescence [GO:0008218]	4	2
bioluminescence [GO:0008218]; fatty-acyl-CoA biosynthetic process [GO:0046949]; long-chain fatty acid metabolic process [GO:0001676]	6	2
bioluminescence [GO:0008218]; fatty acid biosynthetic process [GO:0006633]	1	NA
bioluminescence [GO:0008218]; fatty acid metabolic process [GO:0006631]	1	1
biosynthetic process [GO:0009058]	2	1
biosynthetic process [GO:0009058]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; lipid homeostasis [GO:0055088]	2	2
biosynthetic process [GO:0009058]; L-alanine catabolic process [GO:0042853]	1	1
biosynthetic process [GO:0009058]; L-kynurenine catabolic process [GO:0097053]	1	NA
box C/D snoRNP assembly [GO:0000492]; chromatin remodeling [GO:0006338]; DNA repair [GO:0006281]; histone acetylation [GO:0016573]; regulation of transcription by RNA polymerase II [GO:0006357]	2	NA
box H/ACA RNA 3’-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]	1	NA
butanediol biosynthetic process [GO:0034079]	1	1
butyrate catabolic process [GO:0046359]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	2	1
calcineurin-mediated signaling [GO:0097720]	1	NA
calcineurin-mediated signaling [GO:0097720]; protein dephosphorylation [GO:0006470]	1	NA
calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]	1	NA
calcium ion transmembrane transport [GO:0070588]; cellular calcium ion homeostasis [GO:0006874]; ion transmembrane transport [GO:0034220]	1	1
cAMP-mediated signaling [GO:0019933]; cell morphogenesis [GO:0000902]; cytoskeleton organization [GO:0007010]; regulation of adenylate cyclase activity [GO:0045761]	1	1
canonical glycolysis [GO:0061621]; fructose 1,6-bisphosphate metabolic process [GO:0030388]; fructose 6-phosphate metabolic process [GO:0006002]	1	1
cap-dependent translational initiation [GO:0002191]; formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	1	1
carbohydrate catabolic process [GO:0016052]; deoxyribonucleotide catabolic process [GO:0009264]; deoxyribose phosphate catabolic process [GO:0046386]	1	NA
carbohydrate metabolic process [GO:0005975]	15	7
carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	10	3
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; proteolysis [GO:0006508]; tricarboxylic acid cycle [GO:0006099]	1	1
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
carbohydrate metabolic process [GO:0005975]; G protein-coupled receptor signaling pathway [GO:0007186]; protein phosphorylation [GO:0006468]; regulation of signal transduction [GO:0009966]	1	1
carbohydrate metabolic process [GO:0005975]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]	2	1
carbohydrate metabolic process [GO:0005975]; GDP-mannose biosynthetic process [GO:0009298]	1	NA
carbohydrate metabolic process [GO:0005975]; glucosamine catabolic process [GO:0006043]; N-acetylglucosamine catabolic process [GO:0006046]; N-acetylneuraminate catabolic process [GO:0019262]	2	2
carbohydrate metabolic process [GO:0005975]; glycerol-3-phosphate catabolic process [GO:0046168]; glycerophospholipid metabolic process [GO:0006650]	1	1
carbohydrate metabolic process [GO:0005975]; glycogen biosynthetic process [GO:0005978]	1	1
carbohydrate metabolic process [GO:0005975]; glycoprotein catabolic process [GO:0006516]	1	NA
carbohydrate metabolic process [GO:0005975]; glycosaminoglycan metabolic process [GO:0030203]; protein deglycosylation [GO:0006517]	2	2
carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]	2	NA
carbohydrate metabolic process [GO:0005975]; N-acetylglucosamine catabolic process [GO:0006046]	1	NA
carbohydrate metabolic process [GO:0005975]; N-glycan processing [GO:0006491]	1	1
carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt, oxidative branch [GO:0009051]	1	NA
carbohydrate metabolic process [GO:0005975]; purine ribonucleoside salvage [GO:0006166]	1	1
carbohydrate metabolic process [GO:0005975]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	1	NA
carbohydrate phosphorylation [GO:0046835]; pentose metabolic process [GO:0019321]	1	NA
carboxylic acid metabolic process [GO:0019752]	1	NA
carboxylic acid metabolic process [GO:0019752]; tricarboxylic acid cycle [GO:0006099]	1	1
carnitine transmembrane transport [GO:1902603]; mitochondrial transport [GO:0006839]	1	NA
cell-cell adhesion [GO:0098609]; chemical synaptic transmission [GO:0007268]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]	1	NA
cell-cell adhesion [GO:0098609]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; neurotransmitter receptor transport postsynaptic membrane to endosome [GO:0098968]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]	1	NA
cell-matrix adhesion [GO:0007160]	2	2
cell adhesion [GO:0007155]	2	NA
cell adhesion [GO:0007155]; extracellular matrix organization [GO:0030198]	1	1
cell death [GO:0008219]; proteolysis [GO:0006508]	1	NA
cell development [GO:0048468]; cellular component organization [GO:0016043]; morphogenesis of an epithelium [GO:0002009]	1	NA
cell differentiation [GO:0030154]; gamete generation [GO:0007276]	1	1
cell division [GO:0051301]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]	1	1
cell division [GO:0051301]; protein localization to microtubule [GO:0035372]; regulation of microtubule polymerization or depolymerization [GO:0031110]; spindle assembly [GO:0051225]	1	1
cell redox homeostasis [GO:0045454]	2	NA
cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; hydrogen peroxide catabolic process [GO:0042744]	1	1
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]	1	1
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]; removal of superoxide radicals [GO:0019430]	1	1
cell surface receptor signaling pathway [GO:0007166]; cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]	1	NA
cell volume homeostasis [GO:0006884]; chloride transport [GO:0006821]; mRNA cis splicing, via spliceosome [GO:0045292]; spliceosomal snRNP assembly [GO:0000387]	1	NA
cell wall mannoprotein biosynthetic process [GO:0000032]; GDP-mannose biosynthetic process [GO:0009298]; protein glycosylation [GO:0006486]	1	1
cellular aldehyde metabolic process [GO:0006081]	2	1
cellular calcium ion homeostasis [GO:0006874]	1	NA
cellular calcium ion homeostasis [GO:0006874]; regulation of cytosolic calcium ion concentration [GO:0051480]	1	1
cellular component organization [GO:0016043]	2	2
cellular component organization [GO:0016043]; cellular localization [GO:0051641]	1	1
cellular component organization [GO:0016043]; lipoprotein metabolic process [GO:0042157]	1	1
cellular copper ion homeostasis [GO:0006878]; mitochondrial cytochrome c oxidase assembly [GO:0033617]	1	NA
cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]	1	1
cellular ketone body metabolic process [GO:0046950]; ketone body catabolic process [GO:0046952]	1	1
cellular macromolecule biosynthetic process [GO:0034645]	1	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; proton transmembrane transport [GO:1902600]; sodium ion export across plasma membrane [GO:0036376]	1	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]	2	NA
cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; negative regulation of TORC1 signaling [GO:1904262]; protein localization to lysosome [GO:0061462]; translation [GO:0006412]	1	1
cellular response to amino acid stimulus [GO:0071230]; positive regulation of TOR signaling [GO:0032008]	1	NA
cellular response to cAMP [GO:0071320]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; Rap protein signal transduction [GO:0032486]	1	NA
cellular response to DNA damage stimulus [GO:0006974]; peptidyl-glutamate ADP-deribosylation [GO:0140291]; purine nucleoside metabolic process [GO:0042278]	1	NA
cellular response to DNA damage stimulus [GO:0006974]; protein modification by small protein conjugation [GO:0032446]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
cellular response to heat [GO:0034605]; protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	1
cellular response to hypoxia [GO:0071456]; negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway [GO:1903298]	1	1
cellular response to insulin stimulus [GO:0032869]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]	1	NA
cellular response to oxidative stress [GO:0034599]	2	1
cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]	1	NA
cellular response to unfolded protein [GO:0034620]; chaperone cofactor-dependent protein refolding [GO:0051085]; protein refolding [GO:0042026]; vesicle-mediated transport [GO:0016192]	2	1
CENP-A containing chromatin assembly [GO:0034080]; DNA replication-dependent chromatin assembly [GO:0006335]	1	NA
ceramide biosynthetic process [GO:0046513]; sphingomyelin catabolic process [GO:0006685]	3	3
chaperone-mediated protein complex assembly [GO:0051131]; protein folding [GO:0006457]	1	1
chaperone-mediated protein folding [GO:0061077]; protein peptidyl-prolyl isomerization [GO:0000413]	1	1
chaperone cofactor-dependent protein refolding [GO:0051085]	1	2
chloride transport [GO:0006821]	1	1
cholesterol metabolic process [GO:0008203]; endocytosis [GO:0006897]; lipid transport [GO:0006869]	1	NA
cholesterol transport [GO:0030301]	1	NA
chromatin remodeling [GO:0006338]; histone deacetylation [GO:0016575]; regulation of DNA-templated transcription [GO:0006355]	1	NA
chromosome segregation [GO:0007059]; protein maturation by [4Fe-4S] cluster transfer [GO:0106035]	1	NA
cilium assembly [GO:0060271]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; protein localization to plasma membrane [GO:0072659]	1	NA
citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
clathrin-dependent endocytosis [GO:0072583]; endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	1	NA
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]	1	1
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	1	NA
coenzyme A biosynthetic process [GO:0015937]	1	NA
coenzyme A biosynthetic process [GO:0015937]; phosphorylation [GO:0016310]	1	NA
COPII-coated vesicle budding [GO:0090114]; intracellular protein transport [GO:0006886]	1	NA
COPII-coated vesicle budding [GO:0090114]; mRNA transport [GO:0051028]; positive regulation of TOR signaling [GO:0032008]; protein exit from endoplasmic reticulum [GO:0032527]; protein import into nucleus [GO:0006606]	1	NA
COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum organization [GO:0007029]; intracellular protein transport [GO:0006886]	1	1
COPII-coated vesicle cargo loading [GO:0090110]; intracellular protein transport [GO:0006886]	1	1
cristae formation [GO:0042407]	2	NA
cysteine biosynthetic process [GO:0019344]; cysteine biosynthetic process from serine [GO:0006535]; cysteine biosynthetic process via cystathionine [GO:0019343]	1	NA
cysteine biosynthetic process via cystathionine [GO:0019343]; transsulfuration [GO:0019346]	1	1
cytolysis [GO:0019835]; defense response to bacterium [GO:0042742]; metabolic process [GO:0008152]	1	1
cytoplasmic translation [GO:0002181]	6	6
cytoplasmic translation [GO:0002181]; ribosomal large subunit assembly [GO:0000027]	2	2
cytoplasmic translation [GO:0002181]; ribosomal large subunit biogenesis [GO:0042273]	2	1
cytoplasmic translation [GO:0002181]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	1
cytoplasmic translation [GO:0002181]; translational elongation [GO:0006414]	1	1
cytoplasmic translational elongation [GO:0002182]	1	1
cytoplasmic translational initiation [GO:0002183]	1	1
cytoskeleton-dependent cytokinesis [GO:0061640]	1	1
cytoskeleton organization [GO:0007010]; phosphorylation [GO:0016310]; plasma membrane tubulation [GO:0097320]; regulation of endocytosis [GO:0030100]	1	NA
cytosolic ribosome assembly [GO:0042256]	1	1
D-amino acid catabolic process [GO:0019478]	1	NA
D-gluconate catabolic process [GO:0046177]; pentose-phosphate shunt, oxidative branch [GO:0009051]	1	1
D-ribose metabolic process [GO:0006014]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]	1	1
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of catalytic activity [GO:0043085]	1	NA
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA processing [GO:0006397]	1	NA
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]	1	NA
deoxyribonucleoside triphosphate catabolic process [GO:0009204]; nucleoside triphosphate catabolic process [GO:0009143]; nucleotide metabolic process [GO:0009117]	1	NA
dephosphorylation [GO:0016311]	6	1
dephosphorylation [GO:0016311]; L-serine biosynthetic process [GO:0006564]	1	1
dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]; mRNA polyadenylation [GO:0006378]; termination of RNA polymerase II transcription [GO:0006369]	1	NA
detection of chemical stimulus involved in sensory perception of smell [GO:0050911]	1	NA
dihydrofolate metabolic process [GO:0046452]; folic acid metabolic process [GO:0046655]; glycine biosynthetic process [GO:0006545]; one-carbon metabolic process [GO:0006730]; tetrahydrofolate biosynthetic process [GO:0046654]	1	NA
dimethylallyl diphosphate biosynthetic process [GO:0050992]; isopentenyl diphosphate biosynthetic process [GO:0009240]	1	NA
DNA-templated transcription [GO:0006351]	2	NA
DNA integration [GO:0015074]; nucleosome assembly [GO:0006334]	1	1
DNA repair [GO:0006281]; mRNA splicing, via spliceosome [GO:0000398]; protein K63-linked ubiquitination [GO:0070534]	1	NA
DNA unwinding involved in DNA replication [GO:0006268]; double-strand break repair via homologous recombination [GO:0000724]; meiotic cell cycle [GO:0051321]; nucleotide-excision repair [GO:0006289]; telomere maintenance via telomerase [GO:0007004]	1	NA
dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked mannosylation [GO:0035269]	1	NA
dopaminergic neuron differentiation [GO:0071542]; neuron projection development [GO:0031175]	1	NA
double-strand break repair via homologous recombination [GO:0000724]	1	NA
dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]	1	NA
electron transport chain [GO:0022900]	1	NA
electron transport chain [GO:0022900]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	NA
endocytic recycling [GO:0032456]; Golgi vesicle fusion to target membrane [GO:0048210]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]	1	NA
endocytic recycling [GO:0032456]; vesicle-mediated transport [GO:0016192]	1	NA
endocytosis [GO:0006897]	2	NA
endocytosis [GO:0006897]; endosomal transport [GO:0016197]	1	1
endocytosis [GO:0006897]; endosomal transport [GO:0016197]; plasma membrane tubulation [GO:0097320]	1	NA
endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; regulation of endocytosis [GO:0030100]	1	1
endocytosis [GO:0006897]; post-Golgi vesicle-mediated transport [GO:0006892]	1	NA
endocytosis [GO:0006897]; vesicle-mediated transport [GO:0016192]	1	NA
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 3’-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000461]; translation [GO:0006412]	1	1
endoplasmic reticulum-plasma membrane tethering [GO:0061817]; lipid transport [GO:0006869]	2	1
endoplasmic reticulum membrane organization [GO:0090158]; endoplasmic reticulum-plasma membrane tethering [GO:0061817]	1	1
endoplasmic reticulum organization [GO:0007029]; protein homooligomerization [GO:0051260]	1	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	4	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi localization [GO:0051645]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]	2	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; organelle transport along microtubule [GO:0072384]; protein secretion [GO:0009306]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]	1	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein retention in ER lumen [GO:0006621]; protein transport [GO:0015031]	1	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; vesicle fusion with Golgi apparatus [GO:0048280]	1	NA
endoplasmic reticulum tubular network organization [GO:0071786]; membrane organization [GO:0061024]	1	NA
endosome to lysosome transport [GO:0008333]; phagosome-lysosome fusion [GO:0090385]	1	NA
ER-associated misfolded protein catabolic process [GO:0071712]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	NA
error-free translesion synthesis [GO:0070987]	1	NA
establishment of mitotic spindle localization [GO:0040001]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle assembly [GO:0090307]	1	NA
establishment of synaptic specificity at neuromuscular junction [GO:0007529]; gamma-aminobutyric acid receptor clustering [GO:0097112]; glycine receptor clustering [GO:0072579]; Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; molybdenum incorporation into molybdenum-molybdopterin complex [GO:0018315]; molybdopterin cofactor biosynthetic process [GO:0032324]; postsynaptic neurotransmitter receptor diffusion trapping [GO:0098970]	1	NA
exocytosis [GO:0006887]	1	1
exonucleolytic catabolism of deadenylated mRNA [GO:0043928]	1	NA
farnesyl diphosphate biosynthetic process [GO:0045337]; pheromone biosynthetic process [GO:0042811]	1	1
fatty acid alpha-oxidation [GO:0001561]	2	2
fatty acid beta-oxidation [GO:0006635]	12	8
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	1	1
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; medium-chain fatty acid catabolic process [GO:0051793]	2	2
fatty acid biosynthetic process [GO:0006633]	6	4
fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]	1	1
fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; sphingolipid biosynthetic process [GO:0030148]; very long-chain fatty acid biosynthetic process [GO:0042761]	1	NA
fatty acid metabolic process [GO:0006631]	3	2
fatty acid transport [GO:0015908]	2	NA
FMN biosynthetic process [GO:0009398]; phosphorylation [GO:0016310]; riboflavin biosynthetic process [GO:0009231]; riboflavin metabolic process [GO:0006771]	1	NA
folic acid-containing compound biosynthetic process [GO:0009396]; tetrahydrofolate interconversion [GO:0035999]	1	NA
folic acid metabolic process [GO:0046655]; glycine biosynthetic process from serine [GO:0019264]; L-serine catabolic process [GO:0006565]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; purine nucleobase biosynthetic process [GO:0009113]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	1	1
formaldehyde catabolic process [GO:0046294]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; formation of translation preinitiation complex [GO:0001731]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; regulation of translational initiation [GO:0006446]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]; translation reinitiation [GO:0002188]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	4	2
formation of translation preinitiation complex [GO:0001731]	1	NA
fructose 1,6-bisphosphate metabolic process [GO:0030388]; glycolytic process [GO:0006096]	1	1
fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]	1	NA
fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	3	2
fumarate metabolic process [GO:0006106]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]	1	1
G protein-coupled receptor signaling pathway [GO:0007186]	1	NA
G1/S transition of mitotic cell cycle [GO:0000082]; hippo signaling [GO:0035329]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of apoptotic process [GO:0043065]; regulation of organ growth [GO:0046620]	1	NA
galactose catabolic process via UDP-galactose [GO:0033499]; glucose metabolic process [GO:0006006]	1	NA
galactose metabolic process [GO:0006012]	4	2
gamma-aminobutyric acid biosynthetic process [GO:0009449]	1	NA
gamma-aminobutyric acid catabolic process [GO:0009450]; neurotransmitter catabolic process [GO:0042135]	1	1
GDP-mannose biosynthetic process [GO:0009298]; mannose metabolic process [GO:0006013]; protein N-linked glycosylation [GO:0006487]	1	NA
gluconeogenesis [GO:0006094]	1	1
gluconeogenesis [GO:0006094]; glucose 6-phosphate metabolic process [GO:0051156]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glyceraldehyde-3-phosphate biosynthetic process [GO:0046166]; glycerol catabolic process [GO:0019563]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; pyruvate metabolic process [GO:0006090]	1	1
glucose metabolic process [GO:0006006]; glycolytic process [GO:0006096]	1	1
glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]	1	1
glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]	2	2
glucuronoside catabolic process [GO:0019391]	1	NA
glutamate catabolic process [GO:0006538]	1	1
glutamine metabolic process [GO:0006541]; GMP biosynthetic process [GO:0006177]	1	1
glutamine metabolic process [GO:0006541]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	1	1
glutamyl-tRNA aminoacylation [GO:0006424]	1	NA
glutathione biosynthetic process [GO:0006750]	1	1
glutathione biosynthetic process [GO:0006750]; positive regulation of glutamate-cysteine ligase activity [GO:0035229]	1	NA
glutathione catabolic process [GO:0006751]	1	NA
glutathione metabolic process [GO:0006749]	13	6
glutathione metabolic process [GO:0006749]; hydrogen sulfide metabolic process [GO:0070813]; RNA 3’-end processing [GO:0031123]	1	NA
glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	1
glycerol-3-phosphate metabolic process [GO:0006072]	1	1
glycerol metabolic process [GO:0006071]; phosphorylation [GO:0016310]	1	NA
glycine biosynthetic process, by transamination of glyoxylate [GO:0019265]	2	1
glycine decarboxylation via glycine cleavage system [GO:0019464]	2	2
glycine decarboxylation via glycine cleavage system [GO:0019464]; protein lipoylation [GO:0009249]	1	1
glycogen biosynthetic process [GO:0005978]	1	NA
glycogen biosynthetic process [GO:0005978]; glycogen metabolic process [GO:0005977]; UDP-glucose metabolic process [GO:0006011]	1	1
glycogen catabolic process [GO:0005980]	2	1
glycolate biosynthetic process [GO:0046295]; glyoxal metabolic process [GO:1903189]; negative regulation of neuron death [GO:1901215]; response to oxidative stress [GO:0006979]	1	NA
glycolipid biosynthetic process [GO:0009247]	1	NA
glycolytic process [GO:0006096]	3	2
glycosaminoglycan biosynthetic process [GO:0006024]	1	NA
glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]	1	NA
glycoside catabolic process [GO:0016139]; lipid metabolic process [GO:0006629]; oligosaccharide metabolic process [GO:0009311]	3	1
glycyl-tRNA aminoacylation [GO:0006426]	1	NA
glyoxylate cycle [GO:0006097]; isocitrate metabolic process [GO:0006102]; NADP metabolic process [GO:0006739]; tricarboxylic acid cycle [GO:0006099]	2	2
glyoxylate metabolic process [GO:0046487]	1	1
GMP biosynthetic process [GO:0006177]; GTP biosynthetic process [GO:0006183]	1	NA
Golgi organization [GO:0007030]; protein secretion [GO:0009306]	1	NA
Golgi to endosome transport [GO:0006895]; intracellular protein transport [GO:0006886]; phagolysosome assembly involved in apoptotic cell clearance [GO:0090387]	1	NA
Golgi to plasma membrane protein transport [GO:0043001]; intra-Golgi vesicle-mediated transport [GO:0006891]; SNARE complex disassembly [GO:0035494]	1	NA
guanine catabolic process [GO:0006147]; guanine metabolic process [GO:0046098]	1	NA
heme biosynthetic process [GO:0006783]	1	NA
heme biosynthetic process [GO:0006783]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
heme biosynthetic process [GO:0006783]; protoporphyrinogen IX biosynthetic process [GO:0006782]	1	1
heterochromatin formation [GO:0031507]; nuclear envelope organization [GO:0006998]; nuclear migration [GO:0007097]; nuclear pore localization [GO:0051664]; protein localization to nuclear envelope [GO:0090435]	1	1
histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]	1	1
histone H4 acetylation [GO:0043967]; nervous system development [GO:0007399]; regulation of transcription by RNA polymerase II [GO:0006357]	1	NA
homocysteine catabolic process [GO:0043418]; proteolysis [GO:0006508]; response to toxic substance [GO:0009636]	1	1
homogentisate catabolic process [GO:1902000]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	1
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	1
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]	1	1
hydrogen peroxide catabolic process [GO:0042744]; response to hydrogen peroxide [GO:0042542]	1	1
immune response [GO:0006955]	1	NA
immune response [GO:0006955]; proteolysis involved in protein catabolic process [GO:0051603]	1	NA
IMP salvage [GO:0032264]	1	1
innate immune response [GO:0045087]; peptidoglycan catabolic process [GO:0009253]	1	NA
inner mitochondrial membrane organization [GO:0007007]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]	1	NA
inositol biosynthetic process [GO:0006021]; inositol metabolic process [GO:0006020]; inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; signal transduction [GO:0007165]	2	NA
inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654]	1	NA
inositol catabolic process [GO:0019310]	1	1
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of flagellated sperm motility [GO:1902093]	1	NA
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]	1	1
intermediate filament cytoskeleton organization [GO:0045104]	1	1
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	NA
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	NA
intracellular cholesterol transport [GO:0032367]; sterol transport [GO:0015918]	1	1
intracellular protein transport [GO:0006886]; lipid droplet organization [GO:0034389]	1	NA
intracellular protein transport [GO:0006886]; Rab protein signal transduction [GO:0032482]	1	NA
intracellular protein transport [GO:0006886]; receptor-mediated endocytosis [GO:0006898]	1	1
intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]	3	1
intracellular protein transport [GO:0006886]; SNARE complex disassembly [GO:0035494]	1	NA
intracellular protein transport [GO:0006886]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]	4	NA
intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	2	NA
intracellular protein transport [GO:0006886]; vesicle docking [GO:0048278]; vesicle fusion [GO:0006906]	1	NA
intracellular sequestering of iron ion [GO:0006880]; iron ion transport [GO:0006826]	1	NA
intracellular signal transduction [GO:0035556]	1	NA
intraciliary retrograde transport [GO:0035721]; non-motile cilium assembly [GO:1905515]; protein localization to cilium [GO:0061512]	1	NA
iron-sulfur cluster assembly [GO:0016226]	1	NA
iron ion homeostasis [GO:0055072]; iron ion transport [GO:0006826]	1	NA
iron ion transport [GO:0006826]	1	NA
isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]	2	2
isoleucyl-tRNA aminoacylation [GO:0006428]	1	NA
isoprenoid biosynthetic process [GO:0008299]; pheromone biosynthetic process [GO:0042811]	1	NA
ketone body biosynthetic process [GO:0046951]; leucine catabolic process [GO:0006552]	1	NA
L-ascorbic acid biosynthetic process [GO:0019853]	7	1
L-glutamate transmembrane transport [GO:0015813]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; lysine biosynthetic process via aminoadipic acid [GO:0019878]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; tricarboxylic acid cycle [GO:0006099]	1	1
L-methionine salvage from methylthioadenosine [GO:0019509]	1	1
L-methionine salvage from methylthioadenosine [GO:0019509]; L-methionine salvage from S-adenosylmethionine [GO:0019284]	2	1
L-methionine salvage from methylthioadenosine [GO:0019509]; purine ribonucleoside salvage [GO:0006166]	1	NA
L-phenylalanine catabolic process [GO:0006559]; tetrahydrobiopterin biosynthetic process [GO:0006729]	1	1
L-phenylalanine catabolic process [GO:0006559]; tyrosine metabolic process [GO:0006570]	1	1
L-proline biosynthetic process [GO:0055129]	1	NA
leucine catabolic process [GO:0006552]	1	2
leucyl-tRNA aminoacylation [GO:0006429]	1	1
lipid catabolic process [GO:0016042]	4	2
lipid metabolic process [GO:0006629]	6	NA
lipid metabolic process [GO:0006629]; response to reactive oxygen species [GO:0000302]	1	NA
lipid transport [GO:0006869]	1	1
lipid transport [GO:0006869]; positive regulation of intracellular cholesterol transport [GO:0032385]	1	1
lipoate biosynthetic process [GO:0009107]; protein lipoylation [GO:0009249]	1	NA
localization [GO:0051179]; response to external stimulus [GO:0009605]; signal transduction [GO:0007165]	1	1
locomotion [GO:0040011]; post-embryonic development [GO:0009791]	1	1
long-chain fatty-acyl-CoA metabolic process [GO:0035336]	4	NA
lysyl-tRNA aminoacylation [GO:0006430]	1	NA
malate metabolic process [GO:0006108]; NADH metabolic process [GO:0006734]; oxaloacetate metabolic process [GO:0006107]; tricarboxylic acid cycle [GO:0006099]	1	1
malate transmembrane transport [GO:0071423]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; succinate transmembrane transport [GO:0071422]; sulfate transport [GO:0008272]; thiosulfate transport [GO:0015709]	2	NA
mannose metabolic process [GO:0006013]	2	1
MAPK cascade [GO:0000165]; protein phosphorylation [GO:0006468]; stress-activated MAPK cascade [GO:0051403]	1	NA
maturation of LSU-rRNA [GO:0000470]; maturation of SSU-rRNA [GO:0030490]; mRNA splicing, via spliceosome [GO:0000398]	1	NA
maturation of LSU-rRNA [GO:0000470]; translation [GO:0006412]	1	1
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	1	1
maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	1
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; translation [GO:0006412]	1	1
meiotic cell cycle [GO:0051321]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	1
metabolite repair [GO:0110051]; nicotinamide nucleotide metabolic process [GO:0046496]	1	NA
methionyl-tRNA aminoacylation [GO:0006431]	1	NA
methylation [GO:0032259]	1	NA
methylation [GO:0032259]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; regulation of gluconeogenesis [GO:0006111]; S-adenosylhomocysteine metabolic process [GO:0046498]; S-adenosylmethionine metabolic process [GO:0046500]; sarcosine metabolic process [GO:1901052]	2	1
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [GO:0019243]; RNA 3’-end processing [GO:0031123]	1	1
microtubule-based movement [GO:0007018]	1	1
microtubule cytoskeleton organization [GO:0000226]; mitotic cell cycle [GO:0000278]	2	2
mitochondrial ADP transmembrane transport [GO:0140021]; mitochondrial ATP transmembrane transport [GO:1990544]	1	1
mitochondrial citrate transmembrane transport [GO:0006843]	1	NA
mitochondrial DNA replication [GO:0006264]; positive regulation of helicase activity [GO:0051096]	1	NA
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	5	2
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process [GO:0043280]	1	1
mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	9	2
mitochondrial electron transport, succinate to ubiquinone [GO:0006121]; tricarboxylic acid cycle [GO:0006099]	1	1
mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]	4	3
mitochondrial fission [GO:0000266]; mitochondrial fusion [GO:0008053]; protein targeting to mitochondrion [GO:0006626]	1	NA
mitochondrial fission [GO:0000266]; rhythmic process [GO:0048511]	1	NA
mitochondrial phosphate ion transmembrane transport [GO:1990547]; phosphate ion transmembrane transport [GO:0035435]	1	NA
mitochondrial respiratory chain complex assembly [GO:0033108]; protein insertion into mitochondrial outer membrane [GO:0045040]	1	NA
mitochondrial respiratory chain complex I assembly [GO:0032981]	1	NA
mitochondrial respiratory chain complex I assembly [GO:0032981]; response to oxidative stress [GO:0006979]	1	NA
mitochondrial RNA processing [GO:0000963]; regulation of mitochondrial mRNA stability [GO:0044528]	1	NA
mitochondrial translation [GO:0032543]	4	1
mitochondrial translational elongation [GO:0070125]	1	NA
mitochondrial translational elongation [GO:0070125]; RNA processing [GO:0006396]	1	NA
mitochondrial translational elongation [GO:0070125]; translational elongation [GO:0006414]	1	1
mitochondrial translational termination [GO:0070126]	1	NA
mitochondrial transmembrane transport [GO:1990542]; serine import into mitochondrion [GO:0140300]	2	NA
mitochondrial tRNA 3’-end processing [GO:1990180]; tRNA 3’-terminal CCA addition [GO:0001680]; tRNA processing [GO:0008033]	1	NA
mitochondrial tRNA 5’-end processing [GO:0097745]; tRNA 5’-leader removal [GO:0001682]	1	1
mitochondrion organization [GO:0007005]	2	1
mitochondrion organization [GO:0007005]; regulation of mRNA processing [GO:0050684]	1	NA
mitotic cell cycle [GO:0000278]	1	NA
mitotic cytokinesis [GO:0000281]	2	1
mitotic spindle organization [GO:0007052]	1	NA
mRNA catabolic process [GO:0006402]; RNA-mediated gene silencing [GO:0031047]	1	1
mRNA export from nucleus [GO:0006406]	1	NA
mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]	1	1
mRNA polyadenylation [GO:0006378]; mRNA processing [GO:0006397]	1	NA
mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; RNA splicing [GO:0008380]	1	NA
mRNA splice site selection [GO:0006376]	1	NA
mRNA splicing, via spliceosome [GO:0000398]	4	1
mRNA splicing, via spliceosome [GO:0000398]; P-body assembly [GO:0033962]	1	NA
mRNA transport [GO:0051028]; nucleocytoplasmic transport [GO:0006913]; protein import into nucleus [GO:0006606]	1	NA
mRNA transport [GO:0051028]; regulation of translation [GO:0006417]	1	NA
multicellular organism reproduction [GO:0032504]	11	3
muscle contraction [GO:0006936]	1	1
muscle contraction [GO:0006936]; sarcomere organization [GO:0045214]	1	NA
N-acetylneuraminate catabolic process [GO:0019262]	1	NA
N-terminal peptidyl-glycine N-myristoylation [GO:0018008]	1	NA
N-terminal peptidyl-methionine acetylation [GO:0017196]	2	NA
NADPH regeneration [GO:0006740]	1	1
negative regulation of endopeptidase activity [GO:0010951]; proteolysis [GO:0006508]	1	1
negative regulation of peptidase activity [GO:0010466]	11	1
negative regulation of phosphoprotein phosphatase activity [GO:0032515]	1	NA
negative regulation of translation [GO:0017148]; P-body assembly [GO:0033962]; stress granule assembly [GO:0034063]	1	NA
negative regulation of translation [GO:0017148]; translation [GO:0006412]	1	1
neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]	1	NA
neuron projection morphogenesis [GO:0048812]; positive regulation of axon extension [GO:0045773]; positive regulation of dendritic spine morphogenesis [GO:0061003]; postsynaptic actin cytoskeleton organization [GO:0098974]; regulation of actin filament polymerization [GO:0030833]	1	NA
neurotransmitter catabolic process [GO:0042135]	2	1
nitrogen compound metabolic process [GO:0006807]	6	1
NLS-bearing protein import into nucleus [GO:0006607]	1	NA
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; translation [GO:0006412]	1	1
nuclear-transcribed mRNA catabolic process, exonucleolytic [GO:0000291]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; positive regulation of translational initiation [GO:0045948]; transcription initiation at RNA polymerase II promoter [GO:0006367]	1	NA
nucleobase-containing compound metabolic process [GO:0006139]; organonitrogen compound metabolic process [GO:1901564]	1	NA
nucleocytoplasmic transport [GO:0006913]	1	NA
nucleoside diphosphate catabolic process [GO:0009134]	1	NA
nucleoside metabolic process [GO:0009116]	1	NA
nucleoside phosphate metabolic process [GO:0006753]; ribose phosphate metabolic process [GO:0019693]	1	1
nucleosome assembly [GO:0006334]	3	2
nucleotide metabolic process [GO:0009117]	1	1
ommochrome biosynthetic process [GO:0006727]; tryptophan catabolic process to acetyl-CoA [GO:0019442]; tryptophan catabolic process to kynurenine [GO:0019441]	1	1
one-carbon metabolic process [GO:0006730]	1	NA
one-carbon metabolic process [GO:0006730]; S-adenosylmethionine cycle [GO:0033353]	1	1
organonitrogen compound catabolic process [GO:1901565]	1	1
peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]	4	4
peptide cross-linking [GO:0018149]	2	1
peptide metabolic process [GO:0006518]	1	NA
peptide metabolic process [GO:0006518]; protein processing [GO:0016485]	2	NA
peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]	1	NA
peptidyl-arginine methylation [GO:0018216]	2	1
peptidyl-glutamine methylation [GO:0018364]; rRNA (guanine-N7)-methylation [GO:0070476]; tRNA methylation [GO:0030488]	1	NA
peptidyl-lysine hydroxylation [GO:0017185]	1	NA
phenylalanyl-tRNA aminoacylation [GO:0006432]	1	1
phosphocreatine biosynthetic process [GO:0046314]; phosphorylation [GO:0016310]	1	1
phosphorylation [GO:0016310]	2	NA
phosphorylation [GO:0016310]; pyridoxal 5’-phosphate salvage [GO:0009443]	1	NA
phosphorylation [GO:0016310]; selenocysteine biosynthetic process [GO:0016260]	1	1
plasma membrane phospholipid scrambling [GO:0017121]	1	NA
pointed-end actin filament capping [GO:0051694]	1	NA
polyamine biosynthetic process [GO:0006596]; spermidine biosynthetic process [GO:0008295]	1	NA
positive regulation of apoptotic signaling pathway [GO:2001235]; translation [GO:0006412]	1	1
positive regulation of DNA-templated transcription [GO:0045893]	1	NA
positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]	1	NA
positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of protein localization to early endosome [GO:1902966]; regulation of cell shape [GO:0008360]; regulation of organelle assembly [GO:1902115]	1	1
positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136]	1	NA
positive regulation of protein phosphorylation [GO:0001934]; rescue of stalled ribosome [GO:0072344]	1	1
positive regulation of protein ubiquitination [GO:0031398]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	1	NA
positive regulation of RNA polymerase II transcription preinitiation complex assembly [GO:0045899]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
positive regulation of translation [GO:0045727]	1	NA
positive regulation of translational elongation [GO:0045901]; positive regulation of translational termination [GO:0045905]	1	1
positive regulation of voltage-gated potassium channel activity [GO:1903818]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic transmission, cholinergic [GO:0032222]; rhythmic process [GO:0048511]; sleep [GO:0030431]	1	NA
positive regulation of Wnt signaling pathway [GO:0030177]	1	NA
post-translational protein modification [GO:0043687]; protein N-linked glycosylation via asparagine [GO:0018279]	1	NA
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]	1	NA
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; protein insertion into ER membrane [GO:0045048]	1	NA
post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	1	NA
postreplication repair [GO:0006301]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]	2	NA
proline catabolic process to glutamate [GO:0010133]	2	2
prolyl-tRNA aminoacylation [GO:0006433]	1	NA
prostaglandin metabolic process [GO:0006693]	3	1
proteasomal protein catabolic process [GO:0010498]	5	4
proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	NA
proteasomal protein catabolic process [GO:0010498]; ubiquitin-dependent protein catabolic process [GO:0006511]	3	3
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	10	9
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]	1	1
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; regulation of proteasomal protein catabolic process [GO:0061136]	1	1
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of metabolic process [GO:0019222]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of protein catabolic process [GO:0042176]	1	1
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]	1	1
proteasome assembly [GO:0043248]	1	NA
protein deglycosylation [GO:0006517]	1	NA
protein deneddylation [GO:0000338]	2	NA
protein depalmitoylation [GO:0002084]	2	1
protein depalmitoylation [GO:0002084]; receptor-mediated endocytosis [GO:0006898]	1	NA
protein dephosphorylation [GO:0006470]	2	1
protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]	1	NA
protein deubiquitination [GO:0016579]; regulation of protein stability [GO:0031647]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
protein export from nucleus [GO:0006611]	1	NA
protein folding [GO:0006457]	10	6
protein folding [GO:0006457]; protein peptidyl-prolyl isomerization [GO:0000413]	3	1
protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	1
protein folding [GO:0006457]; response to endoplasmic reticulum stress [GO:0034976]	2	2
protein folding [GO:0006457]; ubiquitin-dependent ERAD pathway [GO:0030433]	2	2
protein folding in endoplasmic reticulum [GO:0034975]	1	NA
protein geranylgeranylation [GO:0018344]	1	NA
protein geranylgeranylation [GO:0018344]; protein prenylation [GO:0018342]	1	NA
protein glycosylation [GO:0006486]	1	1
protein import into mitochondrial matrix [GO:0030150]	2	NA
protein import into nucleus [GO:0006606]	2	NA
protein import into nucleus [GO:0006606]; ribosomal subunit export from nucleus [GO:0000054]	1	NA
protein initiator methionine removal involved in protein maturation [GO:0035551]	1	1
protein K48-linked deubiquitination [GO:0071108]	1	NA
protein localization [GO:0008104]; protein transport [GO:0015031]	1	NA
protein maturation [GO:0051604]	1	NA
protein modification by small protein conjugation [GO:0032446]; protein neddylation [GO:0045116]	1	NA
protein modification by small protein conjugation [GO:0032446]; protein sumoylation [GO:0016925]	2	NA
protein N-linked glycosylation [GO:0006487]	2	1
protein N-linked glycosylation via asparagine [GO:0018279]	3	2
protein palmitoylation [GO:0018345]	1	NA
protein phosphorylation [GO:0006468]	4	1
protein phosphorylation [GO:0006468]; regulation of mitotic cell cycle [GO:0007346]	1	NA
protein phosphorylation [GO:0006468]; tRNA processing [GO:0008033]; tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]	1	NA
protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein processing [GO:0016485]	2	1
protein processing involved in protein targeting to mitochondrion [GO:0006627]	1	1
protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]	1	NA
protein refolding [GO:0042026]; response to heat [GO:0009408]	3	2
protein secretion [GO:0009306]	1	NA
protein stabilization [GO:0050821]	1	NA
protein sumoylation [GO:0016925]	1	NA
protein targeting [GO:0006605]; protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	1	NA
protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]	1	NA
protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	1	NA
protein targeting to membrane [GO:0006612]	1	1
protein transport [GO:0015031]	1	NA
protein transport [GO:0015031]; small GTPase mediated signal transduction [GO:0007264]; vesicle-mediated transport [GO:0016192]	1	1
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]	1	NA
protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteolysis [GO:0006508]	61	19
proteolysis [GO:0006508]; regulation of apoptotic process [GO:0042981]	1	NA
proteolysis involved in protein catabolic process [GO:0051603]	3	1
proteolysis involved in protein catabolic process [GO:0051603]; regulation of catalytic activity [GO:0050790]	4	4
proton motive force-driven ATP synthesis [GO:0015986]	6	6
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	1	1
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]; proton transmembrane transport [GO:1902600]	1	1
proton transmembrane transport [GO:1902600]	1	1
protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
purine nucleobase metabolic process [GO:0006144]	1	NA
purine nucleobase metabolic process [GO:0006144]; purine nucleotide metabolic process [GO:0006163]	1	1
purine ribonucleoside salvage [GO:0006166]	1	NA
purine ribonucleotide catabolic process [GO:0009154]	1	NA
pyridoxal phosphate biosynthetic process [GO:0042823]; pyridoxine biosynthetic process [GO:0008615]	1	NA
pyrimidine nucleobase catabolic process [GO:0006208]	1	1
Ras protein signal transduction [GO:0007265]	2	NA
regulation of actin cytoskeleton organization [GO:0032956]	1	1
regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	1	NA
regulation of cobalamin metabolic process [GO:0106064]	1	NA
regulation of DNA-templated transcription [GO:0006355]	2	1
regulation of gene expression [GO:0010468]	1	NA
regulation of macromolecule metabolic process [GO:0060255]; regulation of nitrogen compound metabolic process [GO:0051171]; regulation of primary metabolic process [GO:0080090]	1	NA
regulation of mitotic cell cycle [GO:0007346]; signal transduction [GO:0007165]	1	1
regulation of muscle contraction [GO:0006937]; skeletal muscle contraction [GO:0003009]	3	3
regulation of protein catabolic process [GO:0042176]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
regulation of protein phosphorylation [GO:0001932]	2	1
regulation of signal transduction [GO:0009966]	1	NA
regulation of transcription by RNA polymerase II [GO:0006357]	3	NA
regulation of translation [GO:0006417]	1	NA
removal of superoxide radicals [GO:0019430]	1	1
respiratory electron transport chain [GO:0022904]	2	NA
response to endoplasmic reticulum stress [GO:0034976]	1	1
response to hormone [GO:0009725]	1	1
response to oxidative stress [GO:0006979]	5	NA
Rho protein signal transduction [GO:0007266]	1	1
ribonucleoprotein complex assembly [GO:0022618]; translation [GO:0006412]	1	NA
ribosomal large subunit assembly [GO:0000027]; translation [GO:0006412]	2	1
ribosomal large subunit biogenesis [GO:0042273]; translation [GO:0006412]	1	1
ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	2	NA
ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]; translation [GO:0006412]	1	1
ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	1	1
ribosomal subunit export from nucleus [GO:0000054]; translational initiation [GO:0006413]; translational termination [GO:0006415]	1	1
ribosome biogenesis [GO:0042254]	2	1
ribosome biogenesis [GO:0042254]; translation [GO:0006412]	1	NA
RNA-mediated gene silencing [GO:0031047]	1	1
RNA 3’-end processing [GO:0031123]	1	NA
RNA metabolic process [GO:0016070]	1	NA
RNA phosphodiester bond hydrolysis, exonucleolytic [GO:0090503]	1	NA
RNA splicing [GO:0008380]	1	NA
rRNA processing [GO:0006364]	1	NA
sarcosine catabolic process [GO:1901053]	1	1
sensory perception of smell [GO:0007608]	4	3
sensory perception of taste [GO:0050909]; signal transduction [GO:0007165]	1	NA
sequestering of actin monomers [GO:0042989]	1	1
seryl-tRNA aminoacylation [GO:0006434]	1	1
signal transduction [GO:0007165]	4	2
small GTPase mediated signal transduction [GO:0007264]	2	NA
small molecule metabolic process [GO:0044281]	1	NA
snoRNA guided rRNA pseudouridine synthesis [GO:0000454]	1	NA
sorbitol catabolic process [GO:0006062]	1	1
spermine biosynthetic process [GO:0006597]	1	1
spliceosomal snRNP assembly [GO:0000387]	3	NA
spliceosomal tri-snRNP complex assembly [GO:0000244]	1	NA
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	1	NA
SREBP signaling pathway [GO:0032933]	1	NA
SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	2	NA
steroid metabolic process [GO:0008202]	1	NA
sterol transport [GO:0015918]	2	NA
succinyl-CoA metabolic process [GO:0006104]; tricarboxylic acid cycle [GO:0006099]	2	2
sulfation [GO:0051923]	2	NA
tetrahydrobiopterin biosynthetic process [GO:0006729]	3	NA
tetrahydrofolate interconversion [GO:0035999]	2	1
threonyl-tRNA aminoacylation [GO:0006435]	1	1
thymine catabolic process [GO:0006210]; valine catabolic process [GO:0006574]	1	1
translation [GO:0006412]	35	22
translation [GO:0006412]; translational elongation [GO:0006414]	2	2
translational elongation [GO:0006414]	3	3
translational initiation [GO:0006413]	2	NA
transmembrane transport [GO:0055085]	1	NA
trehalose biosynthetic process [GO:0005992]	1	1
trehalose catabolic process [GO:0005993]	1	NA
tricarboxylic acid cycle [GO:0006099]	4	3
tRNA aminoacylation [GO:0043039]; tyrosyl-tRNA aminoacylation [GO:0006437]	1	NA
tRNA modification [GO:0006400]; tRNA-guanine transglycosylation [GO:0101030]	1	1
tRNA processing [GO:0008033]	1	1
tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]	2	NA
tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]	1	NA
tRNA wobble uridine modification [GO:0002098]	1	NA
tryptophan catabolic process to kynurenine [GO:0019441]	1	1
tryptophanyl-tRNA aminoacylation [GO:0006436]	1	NA
tyrosine catabolic process [GO:0006572]	1	1
tyrosine metabolic process [GO:0006570]	1	NA
tyrosyl-tRNA aminoacylation [GO:0006437]	1	1
ubiquinone-6 biosynthetic process [GO:1901006]	1	NA
ubiquitin-dependent ERAD pathway [GO:0030433]	1	NA
ubiquitin-dependent protein catabolic process [GO:0006511]	5	3
UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	3	NA
vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]	1	NA
valine catabolic process [GO:0006574]	1	1
valyl-tRNA aminoacylation [GO:0006438]	1	1
very long-chain fatty acid biosynthetic process [GO:0042761]	1	NA
vesicle-mediated transport [GO:0016192]	1	1
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; beta-alanine biosynthetic process [GO:0019483]; thymine catabolic process [GO:0006210]; uracil catabolic process [GO:0006212]	NA	1
2-oxoglutarate metabolic process [GO:0006103]	NA	1
chromatin remodeling [GO:0006338]	NA	1
DNA repair [GO:0006281]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	NA	1
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]	NA	1
modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; translation [GO:0006412]	NA	1
mRNA splicing, via spliceosome [GO:0000398]; RNA metabolic process [GO:0016070]	NA	1
negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein K48-linked deubiquitination [GO:1903094]; negative regulation of protein ubiquitination [GO:0031397]	NA	1
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]; GDP-mannose metabolic process [GO:0019673]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; citrulline biosynthetic process [GO:0019240]; glutamine metabolic process [GO:0006541]; nitrogen compound metabolic process [GO:0006807]; UTP biosynthetic process [GO:0006228]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]; UMP biosynthetic process [GO:0006222]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; CDP biosynthetic process [GO:0046705]; phosphorylation [GO:0016310]; UDP biosynthetic process [GO:0006225]
[2Fe-2S] cluster assembly [GO:0044571]; iron-sulfur cluster assembly [GO:0016226]
3-keto-sphinganine metabolic process [GO:0006666]; sphingolipid biosynthetic process [GO:0030148]
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]
acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]
actin cytoskeleton organization [GO:0030036]; anatomical structure morphogenesis [GO:0009653]; Cdc42 protein signal transduction [GO:0032488]; endocytosis [GO:0006897]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]; cell morphogenesis [GO:0000902]; negative regulation of filopodium assembly [GO:0051490]; regulation of lamellipodium assembly [GO:0010591]
actin filament bundle assembly [GO:0051017]; cell migration [GO:0016477]; establishment or maintenance of cell polarity [GO:0007163]
actin filament debranching [GO:0071846]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; regulation of cellular component biogenesis [GO:0044087]
actin filament depolymerization [GO:0030042]; barbed-end actin filament capping [GO:0051016]; positive regulation of neuron projection development [GO:0010976]; regulation of lamellipodium assembly [GO:0010591]; sequestering of actin monomers [GO:0042989]
actin filament organization [GO:0007015]; cell migration [GO:0016477]; cortical cytoskeleton organization [GO:0030865]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]
actin filament organization [GO:0007015]; cortical cytoskeleton organization [GO:0030865]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; motor neuron axon guidance [GO:0008045]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]
actin filament polymerization [GO:0030041]; Arp2/3 complex-mediated actin nucleation [GO:0034314]
acyl-CoA metabolic process [GO:0006637]
adenine salvage [GO:0006168]; AMP salvage [GO:0044209]; purine ribonucleoside salvage [GO:0006166]
adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; GTP metabolic process [GO:0046039]; ITP metabolic process [GO:0046041]; nucleoside triphosphate biosynthetic process [GO:0009142]; phosphorylation [GO:0016310]
aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial respiratory chain complex I assembly [GO:0032981]
aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]
aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]
alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA splicing, via spliceosome [GO:0000398]
amino acid metabolic process [GO:0006520]; catecholamine metabolic process [GO:0006584]; serotonin biosynthetic process [GO:0042427]
amino acid transport [GO:0006865]; carbohydrate metabolic process [GO:0005975]
AMP biosynthetic process [GO:0006167]; ATP biosynthetic process [GO:0006754]
AMP catabolic process [GO:0006196]
AMP salvage [GO:0044209]; phosphorylation [GO:0016310]; purine nucleobase metabolic process [GO:0006144]; purine ribonucleoside salvage [GO:0006166]
anatomical structure development [GO:0048856]
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]
animal organ development [GO:0048513]; cell adhesion [GO:0007155]; integrin-mediated signaling pathway [GO:0007229]; system development [GO:0048731]
animal organ development [GO:0048513]; cell development [GO:0048468]; cell migration [GO:0016477]; morphogenesis of an epithelium [GO:0002009]; signal transduction [GO:0007165]
animal organ development [GO:0048513]; cell morphogenesis involved in differentiation [GO:0000904]; cellular component organization [GO:0016043]; system development [GO:0048731]
animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; tissue development [GO:0009888]
animal organ morphogenesis [GO:0009887]; basement membrane assembly [GO:0070831]; cell migration [GO:0016477]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]
animal organ morphogenesis [GO:0009887]; cell-cell adhesion via plasma-membrane adhesion molecules [GO:0098742]; cellular component organization [GO:0016043]; establishment of planar polarity [GO:0001736]; establishment or maintenance of cell polarity [GO:0007163]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]
animal organ morphogenesis [GO:0009887]; cell migration [GO:0016477]; cellular component organization [GO:0016043]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]
anterograde axonal transport [GO:0008089]; protein transport [GO:0015031]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]
apoptotic process [GO:0006915]
apoptotic process [GO:0006915]; cell differentiation [GO:0030154]
Arp2/3 complex-mediated actin nucleation [GO:0034314]; cell migration [GO:0016477]; regulation of actin filament polymerization [GO:0030833]
Arp2/3 complex-mediated actin nucleation [GO:0034314]; regulation of actin filament polymerization [GO:0030833]
asparagine biosynthetic process [GO:0006529]; glutamine metabolic process [GO:0006541]; L-asparagine biosynthetic process [GO:0070981]
asparagine catabolic process via L-aspartate [GO:0033345]
aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]
aspartyl-tRNA aminoacylation [GO:0006422]
autophagosome assembly [GO:0000045]; autophagy of mitochondrion [GO:0000422]; cellular response to nitrogen starvation [GO:0006995]; macroautophagy [GO:0016236]
autophagosome assembly [GO:0000045]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; nuclear membrane reassembly [GO:0031468]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
autophagy [GO:0006914]; response to starvation [GO:0042594]
autophagy of mitochondrion [GO:0000422]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; peroxisome fission [GO:0016559]
axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]
axon guidance [GO:0007411]; morphogenesis of an epithelium [GO:0002009]; nerve development [GO:0021675]
bicoid mRNA localization [GO:0045450]
bioluminescence [GO:0008218]; fatty acid biosynthetic process [GO:0006633]
biosynthetic process [GO:0009058]; L-kynurenine catabolic process [GO:0097053]
box C/D snoRNP assembly [GO:0000492]; chromatin remodeling [GO:0006338]; DNA repair [GO:0006281]; histone acetylation [GO:0016573]; regulation of transcription by RNA polymerase II [GO:0006357]
box H/ACA RNA 3’-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]
calcineurin-mediated signaling [GO:0097720]
calcineurin-mediated signaling [GO:0097720]; protein dephosphorylation [GO:0006470]
calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]
carbohydrate catabolic process [GO:0016052]; deoxyribonucleotide catabolic process [GO:0009264]; deoxyribose phosphate catabolic process [GO:0046386]
carbohydrate metabolic process [GO:0005975]; GDP-mannose biosynthetic process [GO:0009298]
carbohydrate metabolic process [GO:0005975]; glycoprotein catabolic process [GO:0006516]
carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]
carbohydrate metabolic process [GO:0005975]; N-acetylglucosamine catabolic process [GO:0006046]
carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt, oxidative branch [GO:0009051]
carbohydrate metabolic process [GO:0005975]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]
carbohydrate phosphorylation [GO:0046835]; pentose metabolic process [GO:0019321]
carboxylic acid metabolic process [GO:0019752]
carnitine transmembrane transport [GO:1902603]; mitochondrial transport [GO:0006839]
cell-cell adhesion [GO:0098609]; chemical synaptic transmission [GO:0007268]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]
cell-cell adhesion [GO:0098609]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; neurotransmitter receptor transport postsynaptic membrane to endosome [GO:0098968]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]
cell adhesion [GO:0007155]
cell death [GO:0008219]; proteolysis [GO:0006508]
cell development [GO:0048468]; cellular component organization [GO:0016043]; morphogenesis of an epithelium [GO:0002009]
cell redox homeostasis [GO:0045454]
cell surface receptor signaling pathway [GO:0007166]; cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]
cell volume homeostasis [GO:0006884]; chloride transport [GO:0006821]; mRNA cis splicing, via spliceosome [GO:0045292]; spliceosomal snRNP assembly [GO:0000387]
cellular calcium ion homeostasis [GO:0006874]
cellular copper ion homeostasis [GO:0006878]; mitochondrial cytochrome c oxidase assembly [GO:0033617]
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]
cellular response to amino acid stimulus [GO:0071230]; positive regulation of TOR signaling [GO:0032008]
cellular response to cAMP [GO:0071320]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; Rap protein signal transduction [GO:0032486]
cellular response to DNA damage stimulus [GO:0006974]; peptidyl-glutamate ADP-deribosylation [GO:0140291]; purine nucleoside metabolic process [GO:0042278]
cellular response to insulin stimulus [GO:0032869]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]
cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]
CENP-A containing chromatin assembly [GO:0034080]; DNA replication-dependent chromatin assembly [GO:0006335]
cholesterol metabolic process [GO:0008203]; endocytosis [GO:0006897]; lipid transport [GO:0006869]
cholesterol transport [GO:0030301]
chromatin remodeling [GO:0006338]; histone deacetylation [GO:0016575]; regulation of DNA-templated transcription [GO:0006355]
chromosome segregation [GO:0007059]; protein maturation by [4Fe-4S] cluster transfer [GO:0106035]
cilium assembly [GO:0060271]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; protein localization to plasma membrane [GO:0072659]
clathrin-dependent endocytosis [GO:0072583]; endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]
coenzyme A biosynthetic process [GO:0015937]
coenzyme A biosynthetic process [GO:0015937]; phosphorylation [GO:0016310]
COPII-coated vesicle budding [GO:0090114]; intracellular protein transport [GO:0006886]
COPII-coated vesicle budding [GO:0090114]; mRNA transport [GO:0051028]; positive regulation of TOR signaling [GO:0032008]; protein exit from endoplasmic reticulum [GO:0032527]; protein import into nucleus [GO:0006606]
cristae formation [GO:0042407]
cysteine biosynthetic process [GO:0019344]; cysteine biosynthetic process from serine [GO:0006535]; cysteine biosynthetic process via cystathionine [GO:0019343]
cytoskeleton organization [GO:0007010]; phosphorylation [GO:0016310]; plasma membrane tubulation [GO:0097320]; regulation of endocytosis [GO:0030100]
D-amino acid catabolic process [GO:0019478]
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of catalytic activity [GO:0043085]
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA processing [GO:0006397]
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]
deoxyribonucleoside triphosphate catabolic process [GO:0009204]; nucleoside triphosphate catabolic process [GO:0009143]; nucleotide metabolic process [GO:0009117]
dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]; mRNA polyadenylation [GO:0006378]; termination of RNA polymerase II transcription [GO:0006369]
detection of chemical stimulus involved in sensory perception of smell [GO:0050911]
dihydrofolate metabolic process [GO:0046452]; folic acid metabolic process [GO:0046655]; glycine biosynthetic process [GO:0006545]; one-carbon metabolic process [GO:0006730]; tetrahydrofolate biosynthetic process [GO:0046654]
dimethylallyl diphosphate biosynthetic process [GO:0050992]; isopentenyl diphosphate biosynthetic process [GO:0009240]
DNA-templated transcription [GO:0006351]
DNA repair [GO:0006281]; mRNA splicing, via spliceosome [GO:0000398]; protein K63-linked ubiquitination [GO:0070534]
DNA unwinding involved in DNA replication [GO:0006268]; double-strand break repair via homologous recombination [GO:0000724]; meiotic cell cycle [GO:0051321]; nucleotide-excision repair [GO:0006289]; telomere maintenance via telomerase [GO:0007004]
dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked mannosylation [GO:0035269]
dopaminergic neuron differentiation [GO:0071542]; neuron projection development [GO:0031175]
double-strand break repair via homologous recombination [GO:0000724]
dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]
electron transport chain [GO:0022900]
electron transport chain [GO:0022900]; mitochondrial respiratory chain complex I assembly [GO:0032981]
endocytic recycling [GO:0032456]; Golgi vesicle fusion to target membrane [GO:0048210]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]
endocytic recycling [GO:0032456]; vesicle-mediated transport [GO:0016192]
endocytosis [GO:0006897]
endocytosis [GO:0006897]; endosomal transport [GO:0016197]; plasma membrane tubulation [GO:0097320]
endocytosis [GO:0006897]; post-Golgi vesicle-mediated transport [GO:0006892]
endocytosis [GO:0006897]; vesicle-mediated transport [GO:0016192]
endoplasmic reticulum organization [GO:0007029]; protein homooligomerization [GO:0051260]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein retention in ER lumen [GO:0006621]; protein transport [GO:0015031]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; vesicle fusion with Golgi apparatus [GO:0048280]
endoplasmic reticulum tubular network organization [GO:0071786]; membrane organization [GO:0061024]
endosome to lysosome transport [GO:0008333]; phagosome-lysosome fusion [GO:0090385]
ER-associated misfolded protein catabolic process [GO:0071712]; ubiquitin-dependent ERAD pathway [GO:0030433]
error-free translesion synthesis [GO:0070987]
establishment of mitotic spindle localization [GO:0040001]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle assembly [GO:0090307]
establishment of synaptic specificity at neuromuscular junction [GO:0007529]; gamma-aminobutyric acid receptor clustering [GO:0097112]; glycine receptor clustering [GO:0072579]; Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; molybdenum incorporation into molybdenum-molybdopterin complex [GO:0018315]; molybdopterin cofactor biosynthetic process [GO:0032324]; postsynaptic neurotransmitter receptor diffusion trapping [GO:0098970]
exonucleolytic catabolism of deadenylated mRNA [GO:0043928]
fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; sphingolipid biosynthetic process [GO:0030148]; very long-chain fatty acid biosynthetic process [GO:0042761]
fatty acid transport [GO:0015908]
FMN biosynthetic process [GO:0009398]; phosphorylation [GO:0016310]; riboflavin biosynthetic process [GO:0009231]; riboflavin metabolic process [GO:0006771]
folic acid-containing compound biosynthetic process [GO:0009396]; tetrahydrofolate interconversion [GO:0035999]
formation of cytoplasmic translation initiation complex [GO:0001732]
formation of cytoplasmic translation initiation complex [GO:0001732]; formation of translation preinitiation complex [GO:0001731]
formation of cytoplasmic translation initiation complex [GO:0001732]; translation reinitiation [GO:0002188]
formation of translation preinitiation complex [GO:0001731]
fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]
G protein-coupled receptor signaling pathway [GO:0007186]
G1/S transition of mitotic cell cycle [GO:0000082]; hippo signaling [GO:0035329]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of apoptotic process [GO:0043065]; regulation of organ growth [GO:0046620]
galactose catabolic process via UDP-galactose [GO:0033499]; glucose metabolic process [GO:0006006]
gamma-aminobutyric acid biosynthetic process [GO:0009449]
GDP-mannose biosynthetic process [GO:0009298]; mannose metabolic process [GO:0006013]; protein N-linked glycosylation [GO:0006487]
glucuronoside catabolic process [GO:0019391]
glutamyl-tRNA aminoacylation [GO:0006424]
glutathione biosynthetic process [GO:0006750]; positive regulation of glutamate-cysteine ligase activity [GO:0035229]
glutathione catabolic process [GO:0006751]
glutathione metabolic process [GO:0006749]; hydrogen sulfide metabolic process [GO:0070813]; RNA 3’-end processing [GO:0031123]
glycerol metabolic process [GO:0006071]; phosphorylation [GO:0016310]
glycogen biosynthetic process [GO:0005978]
glycolate biosynthetic process [GO:0046295]; glyoxal metabolic process [GO:1903189]; negative regulation of neuron death [GO:1901215]; response to oxidative stress [GO:0006979]
glycolipid biosynthetic process [GO:0009247]
glycosaminoglycan biosynthetic process [GO:0006024]
glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]
glycyl-tRNA aminoacylation [GO:0006426]
GMP biosynthetic process [GO:0006177]; GTP biosynthetic process [GO:0006183]
Golgi organization [GO:0007030]; protein secretion [GO:0009306]
Golgi to endosome transport [GO:0006895]; intracellular protein transport [GO:0006886]; phagolysosome assembly involved in apoptotic cell clearance [GO:0090387]
Golgi to plasma membrane protein transport [GO:0043001]; intra-Golgi vesicle-mediated transport [GO:0006891]; SNARE complex disassembly [GO:0035494]
guanine catabolic process [GO:0006147]; guanine metabolic process [GO:0046098]
heme biosynthetic process [GO:0006783]
heme biosynthetic process [GO:0006783]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]
histone H4 acetylation [GO:0043967]; nervous system development [GO:0007399]; regulation of transcription by RNA polymerase II [GO:0006357]
immune response [GO:0006955]
immune response [GO:0006955]; proteolysis involved in protein catabolic process [GO:0051603]
innate immune response [GO:0045087]; peptidoglycan catabolic process [GO:0009253]
inner mitochondrial membrane organization [GO:0007007]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]
inositol biosynthetic process [GO:0006021]; inositol metabolic process [GO:0006020]; inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; signal transduction [GO:0007165]
inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654]
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of flagellated sperm motility [GO:1902093]
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]
intracellular protein transport [GO:0006886]; lipid droplet organization [GO:0034389]
intracellular protein transport [GO:0006886]; Rab protein signal transduction [GO:0032482]
intracellular protein transport [GO:0006886]; SNARE complex disassembly [GO:0035494]
intracellular protein transport [GO:0006886]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]
intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]
intracellular protein transport [GO:0006886]; vesicle docking [GO:0048278]; vesicle fusion [GO:0006906]
intracellular sequestering of iron ion [GO:0006880]; iron ion transport [GO:0006826]
intracellular signal transduction [GO:0035556]
intraciliary retrograde transport [GO:0035721]; non-motile cilium assembly [GO:1905515]; protein localization to cilium [GO:0061512]
iron-sulfur cluster assembly [GO:0016226]
iron ion homeostasis [GO:0055072]; iron ion transport [GO:0006826]
iron ion transport [GO:0006826]
isoleucyl-tRNA aminoacylation [GO:0006428]
isoprenoid biosynthetic process [GO:0008299]; pheromone biosynthetic process [GO:0042811]
ketone body biosynthetic process [GO:0046951]; leucine catabolic process [GO:0006552]
L-methionine salvage from methylthioadenosine [GO:0019509]; purine ribonucleoside salvage [GO:0006166]
L-proline biosynthetic process [GO:0055129]
lipid metabolic process [GO:0006629]
lipid metabolic process [GO:0006629]; response to reactive oxygen species [GO:0000302]
lipoate biosynthetic process [GO:0009107]; protein lipoylation [GO:0009249]
long-chain fatty-acyl-CoA metabolic process [GO:0035336]
lysyl-tRNA aminoacylation [GO:0006430]
malate transmembrane transport [GO:0071423]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; succinate transmembrane transport [GO:0071422]; sulfate transport [GO:0008272]; thiosulfate transport [GO:0015709]
MAPK cascade [GO:0000165]; protein phosphorylation [GO:0006468]; stress-activated MAPK cascade [GO:0051403]
maturation of LSU-rRNA [GO:0000470]; maturation of SSU-rRNA [GO:0030490]; mRNA splicing, via spliceosome [GO:0000398]
metabolite repair [GO:0110051]; nicotinamide nucleotide metabolic process [GO:0046496]
methionyl-tRNA aminoacylation [GO:0006431]
methylation [GO:0032259]
mitochondrial citrate transmembrane transport [GO:0006843]
mitochondrial DNA replication [GO:0006264]; positive regulation of helicase activity [GO:0051096]
mitochondrial fission [GO:0000266]; mitochondrial fusion [GO:0008053]; protein targeting to mitochondrion [GO:0006626]
mitochondrial fission [GO:0000266]; rhythmic process [GO:0048511]
mitochondrial phosphate ion transmembrane transport [GO:1990547]; phosphate ion transmembrane transport [GO:0035435]
mitochondrial respiratory chain complex assembly [GO:0033108]; protein insertion into mitochondrial outer membrane [GO:0045040]
mitochondrial respiratory chain complex I assembly [GO:0032981]
mitochondrial respiratory chain complex I assembly [GO:0032981]; response to oxidative stress [GO:0006979]
mitochondrial RNA processing [GO:0000963]; regulation of mitochondrial mRNA stability [GO:0044528]
mitochondrial translational elongation [GO:0070125]
mitochondrial translational elongation [GO:0070125]; RNA processing [GO:0006396]
mitochondrial translational termination [GO:0070126]
mitochondrial transmembrane transport [GO:1990542]; serine import into mitochondrion [GO:0140300]
mitochondrial tRNA 3’-end processing [GO:1990180]; tRNA 3’-terminal CCA addition [GO:0001680]; tRNA processing [GO:0008033]
mitochondrion organization [GO:0007005]; regulation of mRNA processing [GO:0050684]
mitotic cell cycle [GO:0000278]
mitotic spindle organization [GO:0007052]
mRNA export from nucleus [GO:0006406]
mRNA polyadenylation [GO:0006378]; mRNA processing [GO:0006397]
mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; RNA splicing [GO:0008380]
mRNA splice site selection [GO:0006376]
mRNA splicing, via spliceosome [GO:0000398]; P-body assembly [GO:0033962]
mRNA transport [GO:0051028]; nucleocytoplasmic transport [GO:0006913]; protein import into nucleus [GO:0006606]
mRNA transport [GO:0051028]; regulation of translation [GO:0006417]
muscle contraction [GO:0006936]; sarcomere organization [GO:0045214]
N-acetylneuraminate catabolic process [GO:0019262]
N-terminal peptidyl-glycine N-myristoylation [GO:0018008]
N-terminal peptidyl-methionine acetylation [GO:0017196]
negative regulation of phosphoprotein phosphatase activity [GO:0032515]
negative regulation of translation [GO:0017148]; P-body assembly [GO:0033962]; stress granule assembly [GO:0034063]
neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]
neuron projection morphogenesis [GO:0048812]; positive regulation of axon extension [GO:0045773]; positive regulation of dendritic spine morphogenesis [GO:0061003]; postsynaptic actin cytoskeleton organization [GO:0098974]; regulation of actin filament polymerization [GO:0030833]
NLS-bearing protein import into nucleus [GO:0006607]
nuclear-transcribed mRNA catabolic process, exonucleolytic [GO:0000291]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; positive regulation of translational initiation [GO:0045948]; transcription initiation at RNA polymerase II promoter [GO:0006367]
nucleobase-containing compound metabolic process [GO:0006139]; organonitrogen compound metabolic process [GO:1901564]
nucleocytoplasmic transport [GO:0006913]
nucleoside diphosphate catabolic process [GO:0009134]
nucleoside metabolic process [GO:0009116]
one-carbon metabolic process [GO:0006730]
peptide metabolic process [GO:0006518]
peptide metabolic process [GO:0006518]; protein processing [GO:0016485]
peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]
peptidyl-glutamine methylation [GO:0018364]; rRNA (guanine-N7)-methylation [GO:0070476]; tRNA methylation [GO:0030488]
peptidyl-lysine hydroxylation [GO:0017185]
phosphorylation [GO:0016310]
phosphorylation [GO:0016310]; pyridoxal 5’-phosphate salvage [GO:0009443]
plasma membrane phospholipid scrambling [GO:0017121]
pointed-end actin filament capping [GO:0051694]
polyamine biosynthetic process [GO:0006596]; spermidine biosynthetic process [GO:0008295]
positive regulation of DNA-templated transcription [GO:0045893]
positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]
positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136]
positive regulation of protein ubiquitination [GO:0031398]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]
positive regulation of translation [GO:0045727]
positive regulation of voltage-gated potassium channel activity [GO:1903818]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic transmission, cholinergic [GO:0032222]; rhythmic process [GO:0048511]; sleep [GO:0030431]
positive regulation of Wnt signaling pathway [GO:0030177]
post-translational protein modification [GO:0043687]; protein N-linked glycosylation via asparagine [GO:0018279]
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; protein insertion into ER membrane [GO:0045048]
post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]
postreplication repair [GO:0006301]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]
prolyl-tRNA aminoacylation [GO:0006433]
proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of metabolic process [GO:0019222]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteasome assembly [GO:0043248]
protein deglycosylation [GO:0006517]
protein deneddylation [GO:0000338]
protein depalmitoylation [GO:0002084]; receptor-mediated endocytosis [GO:0006898]
protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]
protein deubiquitination [GO:0016579]; regulation of protein stability [GO:0031647]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein export from nucleus [GO:0006611]
protein folding in endoplasmic reticulum [GO:0034975]
protein geranylgeranylation [GO:0018344]
protein geranylgeranylation [GO:0018344]; protein prenylation [GO:0018342]
protein import into mitochondrial matrix [GO:0030150]
protein import into nucleus [GO:0006606]
protein import into nucleus [GO:0006606]; ribosomal subunit export from nucleus [GO:0000054]
protein K48-linked deubiquitination [GO:0071108]
protein localization [GO:0008104]; protein transport [GO:0015031]
protein maturation [GO:0051604]
protein modification by small protein conjugation [GO:0032446]; protein neddylation [GO:0045116]
protein modification by small protein conjugation [GO:0032446]; protein sumoylation [GO:0016925]
protein palmitoylation [GO:0018345]
protein phosphorylation [GO:0006468]; regulation of mitotic cell cycle [GO:0007346]
protein phosphorylation [GO:0006468]; tRNA processing [GO:0008033]; tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]
protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]
protein secretion [GO:0009306]
protein stabilization [GO:0050821]
protein sumoylation [GO:0016925]
protein targeting [GO:0006605]; protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]
protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
protein transport [GO:0015031]
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]
protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteolysis [GO:0006508]; regulation of apoptotic process [GO:0042981]
protoporphyrinogen IX biosynthetic process [GO:0006782]
purine nucleobase metabolic process [GO:0006144]
purine ribonucleoside salvage [GO:0006166]
purine ribonucleotide catabolic process [GO:0009154]
pyridoxal phosphate biosynthetic process [GO:0042823]; pyridoxine biosynthetic process [GO:0008615]
Ras protein signal transduction [GO:0007265]
regulation of alternative mRNA splicing, via spliceosome [GO:0000381]
regulation of cobalamin metabolic process [GO:0106064]
regulation of gene expression [GO:0010468]
regulation of macromolecule metabolic process [GO:0060255]; regulation of nitrogen compound metabolic process [GO:0051171]; regulation of primary metabolic process [GO:0080090]
regulation of signal transduction [GO:0009966]
regulation of transcription by RNA polymerase II [GO:0006357]
regulation of translation [GO:0006417]
respiratory electron transport chain [GO:0022904]
response to oxidative stress [GO:0006979]
ribonucleoprotein complex assembly [GO:0022618]; translation [GO:0006412]
ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]
ribosome biogenesis [GO:0042254]; translation [GO:0006412]
RNA 3’-end processing [GO:0031123]
RNA metabolic process [GO:0016070]
RNA phosphodiester bond hydrolysis, exonucleolytic [GO:0090503]
RNA splicing [GO:0008380]
rRNA processing [GO:0006364]
sensory perception of taste [GO:0050909]; signal transduction [GO:0007165]
small GTPase mediated signal transduction [GO:0007264]
small molecule metabolic process [GO:0044281]
snoRNA guided rRNA pseudouridine synthesis [GO:0000454]
spliceosomal snRNP assembly [GO:0000387]
spliceosomal tri-snRNP complex assembly [GO:0000244]
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]
SREBP signaling pathway [GO:0032933]
SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
steroid metabolic process [GO:0008202]
sterol transport [GO:0015918]
sulfation [GO:0051923]
tetrahydrobiopterin biosynthetic process [GO:0006729]
translational initiation [GO:0006413]
transmembrane transport [GO:0055085]
trehalose catabolic process [GO:0005993]
tRNA aminoacylation [GO:0043039]; tyrosyl-tRNA aminoacylation [GO:0006437]
tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]
tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]
tRNA wobble uridine modification [GO:0002098]
tryptophanyl-tRNA aminoacylation [GO:0006436]
tyrosine metabolic process [GO:0006570]
ubiquinone-6 biosynthetic process [GO:1901006]
ubiquitin-dependent ERAD pathway [GO:0030433]
UDP-N-acetylglucosamine biosynthetic process [GO:0006048]
vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]
very long-chain fatty acid biosynthetic process [GO:0042761]

kable(BP[is.na(BP[,2])==TRUE,1])

x
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; beta-alanine biosynthetic process [GO:0019483]; thymine catabolic process [GO:0006210]; uracil catabolic process [GO:0006212]
2-oxoglutarate metabolic process [GO:0006103]
chromatin remodeling [GO:0006338]
DNA repair [GO:0006281]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]
modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; translation [GO:0006412]
mRNA splicing, via spliceosome [GO:0000398]; RNA metabolic process [GO:0016070]
negative regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032435]; negative regulation of protein K48-linked deubiquitination [GO:1903094]; negative regulation of protein ubiquitination [GO:0031397]
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]

5.2 C

#pool <- GetProteinGOInfo(pool)
#saveRDS(pool,"./go_terms/graph3_C_pool_uni.RDS")
GO1<- readRDS("./go_terms/graph3_C_pool_uni.RDS")
#fractions <- GetProteinGOInfo(fractions)
#saveRDS(fractions,"./go_terms/graph3_C_fractions_uni.RDS")
GO_2 <- readRDS("./go_terms/graph3_C_fractions_uni.RDS")

################################# molecular function
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..molecular.function.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..molecular.function.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..molecular.function.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")
tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp <- c(results_comp, tmp/(length(BP[,1])))
name_comp <- c(name_comp, "graph3C-pool+fracD2","graph3C-onlyFracD2","graph3C-onlyPoolD2")
colnames(BP) <- c("Function", "D2","D2pool")
kable(BP)

Function	D2	D2pool
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	1	1
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]	2	NA
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]	1	1
(R,R)-butanediol dehydrogenase activity [GO:0000721]; zinc ion binding [GO:0008270]	1	1
(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity [GO:0070626]; N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity [GO:0004018]	1	1
(S)-3-amino-2-methylpropionate transaminase activity [GO:0047298]; 4-aminobutyrate transaminase activity [GO:0003867]; 4-aminobutyrate:2-oxoglutarate transaminase activity [GO:0034386]; pyridoxal phosphate binding [GO:0030170]	1	1
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]	1	NA
1-pyrroline-5-carboxylate dehydrogenase activity [GO:0003842]	1	1
1,4-alpha-glucan branching enzyme activity [GO:0003844]; 1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis) [GO:0102752]; cation binding [GO:0043169]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	1
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]	3	NA
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]	1	NA
2-hydroxyglutarate dehydrogenase activity [GO:0047545]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; 3 iron, 4 sulfur cluster binding [GO:0051538]; 4 iron, 4 sulfur cluster binding [GO:0051539]; electron transfer activity [GO:0009055]; fumarate reductase (menaquinone) [GO:0102040]; metal ion binding [GO:0046872]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	NA
2 iron, 2 sulfur cluster binding [GO:0051537]; flavin adenine dinucleotide binding [GO:0050660]; metal ion binding [GO:0046872]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]	1	1
2 iron, 2 sulfur cluster binding [GO:0051537]; metal ion binding [GO:0046872]; oxidoreductase activity [GO:0016491]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	1	1
3’-5’-exodeoxyribonuclease activity [GO:0008296]	1	NA
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]	1	NA
3’-5’ exonuclease activity [GO:0008408]; 5’-3’ exonuclease activity [GO:0008409]	1	1
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]	1	NA
3-dehydrosphinganine reductase activity [GO:0047560]	1	NA
3-hydroxyacyl-CoA dehydrogenase activity [GO:0003857]; NAD+ binding [GO:0070403]	1	1
3-hydroxyisobutyrate dehydrogenase activity [GO:0008442]; NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
3 iron, 4 sulfur cluster binding [GO:0051538]; flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; glutamate synthase (NADH) activity [GO:0016040]; glutamate synthase activity [GO:0015930]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]	1	1
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]	1	NA
4-alpha-hydroxytetrahydrobiopterin dehydratase activity [GO:0008124]	1	1
4-hydroxyphenylpyruvate dioxygenase activity [GO:0003868]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; iron-responsive element binding [GO:0030350]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; aconitate hydratase activity [GO:0003994]; citrate dehydratase activity [GO:0047780]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; electron-transferring-flavoprotein dehydrogenase activity [GO:0004174]; metal ion binding [GO:0046872]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; FMN binding [GO:0010181]; metal ion binding [GO:0046872]; NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]	1	NA
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; metal ion binding [GO:0046872]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
4 iron, 4 sulfur cluster binding [GO:0051539]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]	1	1
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]	1	NA
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]	1	NA
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]	3	1
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	NA
5-formyltetrahydrofolate cyclo-ligase activity [GO:0030272]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]	2	NA
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]	1	NA
6-phosphofructokinase activity [GO:0003872]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; fructose-6-phosphate binding [GO:0070095]; identical protein binding [GO:0042802]; metal ion binding [GO:0046872]; monosaccharide binding [GO:0048029]	1	1
6-phosphogluconolactonase activity [GO:0017057]	1	NA
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]	1	NA
6,7-dihydropteridine reductase activity [GO:0004155]; NADH binding [GO:0070404]; NADPH binding [GO:0070402]	1	1
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]	1	NA
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]; glycosyltransferase activity [GO:0016757]; signal recognition particle binding [GO:0005047]	1	1
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]	1	NA
acetate CoA-transferase activity [GO:0008775]; acetyl-CoA hydrolase activity [GO:0003986]	1	1
acetyl-CoA C-acetyltransferase activity [GO:0003985]	2	1
acetyl-CoA C-acyltransferase activity [GO:0003988]; acetyl-CoA C-myristoyltransferase activity [GO:0050633]; lipid binding [GO:0008289]; propanoyl-CoA C-acyltransferase activity [GO:0033814]; propionyl-CoA C2-trimethyltridecanoyltransferase activity [GO:0050632]	1	1
acetyl-CoA carboxylase activity [GO:0003989]; ATP binding [GO:0005524]; metal ion binding [GO:0046872]	1	1
acetylcholinesterase activity [GO:0003990]	1	NA
acetylcholinesterase activity [GO:0003990]; transmembrane transporter activity [GO:0022857]	1	1
acetyltransferase activity [GO:0016407]; lipoic acid binding [GO:0031405]	1	1
acid phosphatase activity [GO:0003993]	1	NA
acid phosphatase activity [GO:0003993]; inositol phosphate phosphatase activity [GO:0052745]	2	1
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]	1	NA
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]	3	NA
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]	1	NA
actin binding [GO:0003779]	3	1
actin binding [GO:0003779]; adenylate cyclase binding [GO:0008179]	1	1
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]	1	NA
actin binding [GO:0003779]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]	1	1
actin binding [GO:0003779]; calcium ion binding [GO:0005509]; microtubule binding [GO:0008017]	1	1
actin binding [GO:0003779]; cell adhesion molecule binding [GO:0050839]	1	1
actin binding [GO:0003779]; electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]; muscle alpha-actinin binding [GO:0051371]	1	1
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]	1	NA
actin binding [GO:0003779]; phospholipid binding [GO:0005543]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin binding [GO:0003779]; structural molecule activity [GO:0005198]	1	1
actin filament binding [GO:0051015]	11	6
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]	1	NA
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; cytoskeletal motor activity [GO:0003774]	1	1
actin filament binding [GO:0051015]; ATP binding [GO:0005524]; microfilament motor activity [GO:0000146]	2	2
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]	1	1
actin filament binding [GO:0051015]; calcium ion binding [GO:0005509]; calcium-dependent protein binding [GO:0048306]	3	3
actin filament binding [GO:0051015]; calmodulin binding [GO:0005516]; GTPase activator activity [GO:0005096]	1	1
actin filament binding [GO:0051015]; clathrin adaptor activity [GO:0035615]; clathrin light chain binding [GO:0032051]; phosphatidylinositol-3,4-bisphosphate binding [GO:0043325]; phosphatidylinositol-3,5-bisphosphate binding [GO:0080025]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; mannose binding [GO:0005537]; phosphatidylinositol-4,5-bisphosphate binding [GO:0005546]; signaling receptor activity [GO:0038023]	1	1
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]	1	NA
actin filament binding [GO:0051015]; structural constituent of cytoskeleton [GO:0005200]	1	1
actin filament binding [GO:0051015]; structural molecule activity [GO:0005198]	1	1
actin monomer binding [GO:0003785]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]	2	NA
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]	1	NA
acyl-CoA dehydrogenase activity [GO:0003995]; fatty-acyl-CoA binding [GO:0000062]; flavin adenine dinucleotide binding [GO:0050660]; very-long-chain-acyl-CoA dehydrogenase activity [GO:0017099]	1	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]	3	1
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]	2	NA
acyl-CoA hydrolase activity [GO:0047617]	1	NA
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]	1	1
acyl-CoA oxidase activity [GO:0003997]; FAD binding [GO:0071949]; fatty acid binding [GO:0005504]; flavin adenine dinucleotide binding [GO:0050660]; pristanoyl-CoA oxidase activity [GO:0016402]	1	1
acyl carnitine transmembrane transporter activity [GO:0015227]; transmembrane transporter activity [GO:0022857]	1	1
acyltransferase activity [GO:0016746]	1	NA
acyltransferase activity, transferring groups other than amino-acyl groups [GO:0016747]	2	1
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]	1	NA
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]	1	NA
adenosylhomocysteinase activity [GO:0004013]	1	1
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]	2	2
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]	1	NA
adenylosuccinate synthase activity [GO:0004019]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]	1	1
adenylylsulfate kinase activity [GO:0004020]; ATP binding [GO:0005524]; sulfate adenylyltransferase (ATP) activity [GO:0004781]	1	1
ADP-ribose diphosphatase activity [GO:0047631]	1	NA
ADP-ribosylglutamate hydrolase activity [GO:0140293]	1	NA
ADP binding [GO:0043531]; ATP binding [GO:0005524]; phosphoglycerate kinase activity [GO:0004618]	1	1
ADP binding [GO:0043531]; ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	1	1
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]	2	NA
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]	1	NA
alcohol-forming fatty acyl-CoA reductase activity [GO:0102965]; fatty-acyl-CoA reductase (alcohol-forming) activity [GO:0080019]	4	7
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]	1	NA
aldehyde dehydrogenase (NAD+) activity [GO:0004029]	2	2
aldehyde dehydrogenase (NAD+) activity [GO:0004029]; glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity [GO:0043878]	1	1
alditol:NADP+ 1-oxidoreductase activity [GO:0004032]	4	1
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]	1	1
aldose 1-epimerase activity [GO:0004034]; carbohydrate binding [GO:0030246]; glucose-6-phosphate 1-epimerase activity [GO:0047938]	1	1
alkaline phosphatase activity [GO:0004035]	1	1
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA
alpha-amylase activity [GO:0004556]; metal ion binding [GO:0046872]	1	1
alpha-galactosidase activity [GO:0004557]	3	1
alpha-glucosidase activity [GO:0090599]; carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	2
alpha-L-fucosidase activity [GO:0004560]	3	1
alpha-mannosidase activity [GO:0004559]; carbohydrate binding [GO:0030246]; metal ion binding [GO:0046872]	2	1
alpha,alpha-trehalase activity [GO:0004555]	1	NA
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]	1	NA
amino acid kinase activity [GO:0019202]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]	1	NA
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; leucine-tRNA ligase activity [GO:0004823]	1	1
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]	1	NA
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]	1	NA
aminoacylase activity [GO:0004046]	2	2
aminomethyltransferase activity [GO:0004047]; transaminase activity [GO:0008483]	1	1
aminopeptidase activity [GO:0004177]; cysteine-type endopeptidase activity [GO:0004197]; cysteine-type peptidase activity [GO:0008234]	1	1
aminopeptidase activity [GO:0004177]; dipeptidyl-peptidase activity [GO:0008239]; metal ion binding [GO:0046872]; metalloexopeptidase activity [GO:0008235]	1	1
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]	1	NA
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]	1	NA
AMP deaminase activity [GO:0003876]; metal ion binding [GO:0046872]	1	1
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]	1	NA
antiporter activity [GO:0015297]; malate transmembrane transporter activity [GO:0015140]; oxaloacetate transmembrane transporter activity [GO:0015131]; succinate transmembrane transporter activity [GO:0015141]; sulfate transmembrane transporter activity [GO:0015116]; thiosulfate transmembrane transporter activity [GO:0015117]; transmembrane transporter activity [GO:0022857]	2	2
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]	1	NA
arginine kinase activity [GO:0004054]; ATP binding [GO:0005524]; creatine kinase activity [GO:0004111]; kinase activity [GO:0016301]	1	1
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]	1	NA
arylformamidase activity [GO:0004061]	1	NA
asparaginase activity [GO:0004067]; beta-aspartyl-peptidase activity [GO:0008798]	1	1
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]	1	NA
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]	1	NA
aspartic-type endopeptidase activity [GO:0004190]	1	1
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]	1	NA
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]	1	NA
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]	2	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]	1	1
ATP binding [GO:0005524]; ATP-dependent protein folding chaperone [GO:0140662]; chaperone binding [GO:0051087]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP citrate synthase activity [GO:0003878]; metal ion binding [GO:0046872]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; disordered domain specific binding [GO:0097718]; unfolded protein binding [GO:0051082]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	2	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; unfolded protein binding [GO:0051082]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; metal ion binding [GO:0046872]; P-type sodium:potassium-exchanging transporter activity [GO:0005391]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled cation transmembrane transporter activity [GO:0019829]; P-type calcium transporter activity [GO:0005388]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; DNA helicase activity [GO:0003678]	2	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; metal ion binding [GO:0046872]	2	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]	1	NA
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; P-type calcium transporter activity [GO:0005388]; P-type ion transporter activity [GO:0015662]	1	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; peptidase activity [GO:0008233]; proteasome-activating activity [GO:0036402]	6	6
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; polyubiquitin modification-dependent protein binding [GO:0031593]	1	1
ATP binding [GO:0005524]; calcium ion binding [GO:0005509]; GTP binding [GO:0005525]	1	1
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]	2	NA
ATP binding [GO:0005524]; CMP kinase activity [GO:0036430]; cytidylate kinase activity [GO:0004127]; dCMP kinase activity [GO:0036431]; UMP kinase activity [GO:0033862]	1	1
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]	1	NA
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]	1	NA
ATP binding [GO:0005524]; formate-tetrahydrofolate ligase activity [GO:0004329]; methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	1
ATP binding [GO:0005524]; G protein-coupled receptor binding [GO:0001664]; G protein-coupled receptor kinase activity [GO:0004703]; intramolecular transferase activity, phosphotransferases [GO:0016868]; magnesium ion binding [GO:0000287]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; galactokinase activity [GO:0004335]	2	1
ATP binding [GO:0005524]; GDP phosphatase activity [GO:0004382]; nucleoside diphosphate phosphatase activity [GO:0017110]; UDP phosphatase activity [GO:0045134]	1	1
ATP binding [GO:0005524]; glucokinase activity [GO:0004340]; glucose binding [GO:0005536]	1	1
ATP binding [GO:0005524]; glutamate-cysteine ligase activity [GO:0004357]	1	1
ATP binding [GO:0005524]; glutamate-tRNA ligase activity [GO:0004818]	1	1
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]	1	NA
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]	1	NA
ATP binding [GO:0005524]; GMP synthase activity [GO:0003921]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein serine/threonine kinase activity [GO:0004674]	1	1
ATP binding [GO:0005524]; GTP binding [GO:0005525]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
ATP binding [GO:0005524]; guanyl-nucleotide exchange factor activity [GO:0005085]; protein kinase activity [GO:0004672]	1	1
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]	1	NA
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]	1	NA
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; nucleic acid binding [GO:0003676]; RNA helicase activity [GO:0003724]	1	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]	2	1
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]	1	1
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]	1	NA
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; potassium ion binding [GO:0030955]; pyruvate kinase activity [GO:0004743]	2	2
ATP binding [GO:0005524]; kinase activity [GO:0016301]; magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	1
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]	1	NA
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]	1	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]	1	NA
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]	1	1
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]	2	NA
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]	1	NA
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylamine-glycine ligase activity [GO:0004637]; phosphoribosylformylglycinamidine cyclo-ligase activity [GO:0004641]; phosphoribosylglycinamide formyltransferase activity [GO:0004644]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; phosphoribosylformylglycinamidine synthase activity [GO:0004642]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; pyruvate carboxylase activity [GO:0004736]	1	1
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; SUMO activating enzyme activity [GO:0019948]	1	NA
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]	1	NA
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]	1	NA
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]	1	NA
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]	1	NA
ATP binding [GO:0005524]; protein kinase activity [GO:0004672]	2	1
ATP binding [GO:0005524]; protein serine/threonine kinase activity [GO:0004674]	3	1
ATP binding [GO:0005524]; proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	2	2
ATP binding [GO:0005524]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	1	1
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]	1	NA
ATP binding [GO:0005524]; selenide, water dikinase activity [GO:0004756]	1	1
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]	1	NA
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]	1	NA
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]	1	NA
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]	1	NA
ATP binding [GO:0005524]; ubiquitin activating enzyme activity [GO:0004839]	1	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]	2	1
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]; ubiquitin protein ligase binding [GO:0031625]	1	NA
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]	1	NA
ATP:ADP antiporter activity [GO:0005471]	1	1
ATPase activator activity [GO:0001671]	2	5
beta-galactosidase activity [GO:0004565]	1	NA
beta-glucosidase activity [GO:0008422]	3	2
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]	1	NA
beta-mannosidase activity [GO:0004567]	1	NA
beta-N-acetylglucosaminidase activity [GO:0016231]; beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	2
beta-N-acetylhexosaminidase activity [GO:0004563]; N-acetyl-beta-D-galactosaminidase activity [GO:0102148]	2	1
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]	1	NA
beta-ureidopropionase activity [GO:0003837]; hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	1	1
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]	1	NA
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]	1	NA
bisphosphoglycerate mutase activity [GO:0004082]; phosphoglycerate mutase activity [GO:0004619]	1	1
box H/ACA snoRNA binding [GO:0034513]	1	NA
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]	1	NA
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]	2	NA
calcium channel activity [GO:0005262]; uniporter activity [GO:0015292]	1	1
calcium ion binding [GO:0005509]	13	11
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]	3	4
calcium ion binding [GO:0005509]; calcium-dependent phospholipid binding [GO:0005544]; phosphatidylcholine binding [GO:0031210]; phosphatidylethanolamine binding [GO:0008429]; phosphatidylinositol binding [GO:0035091]	2	1
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]	1	NA
calcium ion binding [GO:0005509]; enzyme regulator activity [GO:0030234]; gluconolactonase activity [GO:0004341]	1	1
calcium ion binding [GO:0005509]; gluconolactonase activity [GO:0004341]	6	1
calcium ion binding [GO:0005509]; laminin binding [GO:0043236]	1	1
calcium ion binding [GO:0005509]; myosin heavy chain binding [GO:0032036]	1	1
calcium ion binding [GO:0005509]; ryanodine-sensitive calcium-release channel activity [GO:0005219]	1	1
calcium ion binding [GO:0005509]; sn-glycerol-3-phosphate:ubiquinone-8 oxidoreductase activity [GO:0052591]	1	1
calcium ion binding [GO:0005509]; unfolded protein binding [GO:0051082]	1	2
calmodulin binding [GO:0005516]; calmodulin-dependent protein phosphatase activity [GO:0033192]; myosin phosphatase activity [GO:0017018]	1	1
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]	1	NA
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]	2	NA
carbohydrate binding [GO:0030246]	3	3
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	2	NA
carbohydrate derivative binding [GO:0097367]; glucose-6-phosphate isomerase activity [GO:0004347]; monosaccharide binding [GO:0048029]	1	1
carbohydrate derivative binding [GO:0097367]; glutamine-fructose-6-phosphate transaminase (isomerizing) activity [GO:0004360]	1	1
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]	1	NA
carbonate dehydratase activity [GO:0004089]; hydro-lyase activity [GO:0016836]; zinc ion binding [GO:0008270]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]	1	1
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]	2	NA
carbonyl reductase (NADPH) activity [GO:0004090]; oxidoreductase activity [GO:0016491]	1	1
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]	1	NA
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	NA
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]	1	NA
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	1	NA
cargo adaptor activity [GO:0140312]; clathrin adaptor activity [GO:0035615]	1	1
carnitine O-palmitoyltransferase activity [GO:0004095]	1	1
catalase activity [GO:0004096]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
catalytic activity [GO:0003824]	4	NA
catalytic activity [GO:0003824]; FAD binding [GO:0071949]	1	NA
catalytic activity [GO:0003824]; molybdenum ion binding [GO:0030151]; pyridoxal phosphate binding [GO:0030170]	1	1
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]	1	NA
cell-cell adhesion mediator activity [GO:0098632]	1	1
cell adhesion molecule binding [GO:0050839]	2	3
chaperone binding [GO:0051087]	1	1
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]	1	NA
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]	1	NA
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]	1	NA
chitin binding [GO:0008061]	2	4
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]	1	NA
chitin binding [GO:0008061]; chitinase activity [GO:0004568]	8	5
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]	1	NA
chloride channel activity [GO:0005254]	1	1
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]	1	NA
chromatin binding [GO:0003682]	1	NA
chromatin binding [GO:0003682]; histone binding [GO:0042393]	2	NA
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]	1	NA
cis-stilbene-oxide hydrolase activity [GO:0033961]; epoxide hydrolase activity [GO:0004301]	3	2
citrate (Si)-synthase activity [GO:0004108]	1	1
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]	1	NA
citrate secondary active transmembrane transporter activity [GO:0071913]	1	1
clathrin adaptor activity [GO:0035615]	2	1
clathrin adaptor activity [GO:0035615]; lipid binding [GO:0008289]	1	1
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]	1	NA
clathrin light chain binding [GO:0032051]; structural molecule activity [GO:0005198]	1	1
CoA-ligase activity [GO:0016405]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	6	2
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]	3	NA
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]	1	NA
CoA-transferase activity [GO:0008410]; succinyl-CoA:3-oxo-acid CoA-transferase activity [GO:0008260]	1	1
copper chaperone activity [GO:0016531]; copper ion binding [GO:0005507]	1	1
copper ion binding [GO:0005507]	1	NA
copper ion binding [GO:0005507]; cytochrome-c oxidase activity [GO:0004129]	1	1
copper ion binding [GO:0005507]; superoxide dismutase activity [GO:0004784]	2	2
cullin family protein binding [GO:0097602]	1	NA
cyclin-dependent protein serine/threonine kinase regulator activity [GO:0016538]	1	1
cyclosporin A binding [GO:0016018]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	2	1
cystathionine beta-synthase activity [GO:0004122]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]	1	NA
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]	1	NA
cysteine-type endopeptidase activity [GO:0004197]	9	8
cysteine-type endopeptidase inhibitor activity [GO:0004869]; cysteine-type peptidase activity [GO:0008234]; endopeptidase inhibitor activity [GO:0004866]	1	1
cysteine-type peptidase activity [GO:0008234]	1	1
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]	1	NA
cytokine activity [GO:0005125]; phenylpyruvate tautomerase activity [GO:0050178]	1	1
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]	1	NA
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]	1	NA
D-ribulokinase activity [GO:0019150]	1	NA
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]	1	NA
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]	1	NA
deaminase activity [GO:0019239]	1	1
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]	1	NA
delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity [GO:0051750]	2	1
delta24(24-1) sterol reductase activity [GO:0000246]; delta24-sterol reductase activity [GO:0050614]; FAD binding [GO:0071949]; oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor [GO:0016628]	1	2
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]	1	NA
deoxyribose-phosphate aldolase activity [GO:0004139]	1	NA
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]	1	NA
dihydrolipoyl dehydrogenase activity [GO:0004148]; flavin adenine dinucleotide binding [GO:0050660]	3	3
dihydrolipoyllysine-residue acetyltransferase activity [GO:0004742]	1	1
dihydrolipoyllysine-residue succinyltransferase activity [GO:0004149]	1	1
dihydropyrimidinase activity [GO:0004157]	1	NA
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]	1	NA
dioxygenase activity [GO:0051213]	1	NA
dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]	2	2
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]	1	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	1	NA
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]	2	NA
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]	1	NA
DNA binding [GO:0003677]	1	NA
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]	1	NA
DNA binding [GO:0003677]; DNA-directed DNA polymerase activity [GO:0003887]; structural constituent of chromatin [GO:0030527]	1	1
DNA binding [GO:0003677]; protein heterodimerization activity [GO:0046982]; structural constituent of chromatin [GO:0030527]	3	3
dolichyl-diphosphooligosaccharide-protein glycotransferase activity [GO:0004579]; metal ion binding [GO:0046872]	1	1
dolichyl-phosphate beta-D-mannosyltransferase activity [GO:0004582]	1	1
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]	1	NA
dynein complex binding [GO:0070840]	1	NA
dynein intermediate chain binding [GO:0045505]	1	1
electron transfer activity [GO:0009055]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]	1	1
electron transfer activity [GO:0009055]; flavin adenine dinucleotide binding [GO:0050660]; fumarate reductase (menaquinone) [GO:0102040]; succinate dehydrogenase (ubiquinone) activity [GO:0008177]; succinate dehydrogenase activity [GO:0000104]	1	1
electron transfer activity [GO:0009055]; heme binding [GO:0020037]; metal ion binding [GO:0046872]	2	2
endopeptidase activator activity [GO:0061133]	1	NA
endopeptidase activity [GO:0004175]; threonine-type endopeptidase activity [GO:0004298]	3	1
endopeptidase inhibitor activity [GO:0004866]	1	1
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]	1	NA
endoribonuclease activity [GO:0004521]	1	1
endoribonuclease activity [GO:0004521]; nuclease activity [GO:0004518]; RNA binding [GO:0003723]	1	1
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]	1	NA
endoribonuclease activity [GO:0004521]; single-stranded RNA binding [GO:0003727]	1	1
enoyl-CoA hydratase activity [GO:0004300]	1	1
enoyl-CoA hydratase activity [GO:0004300]; long-chain-3-hydroxyacyl-CoA dehydrogenase activity [GO:0016509]; NAD+ binding [GO:0070403]	1	1
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]	1	NA
enzyme regulator activity [GO:0030234]	2	2
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]	1	NA
ER retention sequence binding [GO:0046923]	1	NA
estradiol 17-beta-dehydrogenase activity [GO:0004303]	1	1
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]	1	NA
exopolyphosphatase activity [GO:0004309]	1	NA
FAD binding [GO:0071949]; proline dehydrogenase activity [GO:0004657]	1	1
fatty-acyl-CoA binding [GO:0000062]	1	NA
fatty acid binding [GO:0005504]	2	2
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]	1	NA
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]	1	NA
ferrochelatase activity [GO:0004325]	1	NA
FFAT motif binding [GO:0033149]	1	1
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]	1	NA
flavin adenine dinucleotide binding [GO:0050660]; FMN binding [GO:0010181]; NADP binding [GO:0050661]; NADPH-hemoprotein reductase activity [GO:0003958]; oxidoreductase activity [GO:0016491]	1	1
flavin adenine dinucleotide binding [GO:0050660]; oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on CH-OH group of donors [GO:0016614]	3	1
FMN binding [GO:0010181]; oxidoreductase activity [GO:0016491]	1	1
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]	1	NA
fructose-bisphosphate aldolase activity [GO:0004332]	1	1
fumarate hydratase activity [GO:0004333]	1	1
fumarylacetoacetase activity [GO:0004334]; metal ion binding [GO:0046872]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	1
G protein-coupled receptor binding [GO:0001664]; G-protein beta/gamma-subunit complex binding [GO:0031683]; GTPase activity [GO:0003924]; guanyl nucleotide binding [GO:0019001]	1	1
G protein activity [GO:0003925]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	1	1
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]	1	NA
gamma-glutamyl-peptidase activity [GO:0034722]	1	NA
gamma-glutamylaminecyclotransferase activity [GO:0061929]	1	NA
gamma-glutamylcyclotransferase activity [GO:0003839]	1	NA
GDP-L-fucose synthase activity [GO:0050577]	1	NA
GDP-mannose 4,6-dehydratase activity [GO:0008446]	1	NA
GDP binding [GO:0019003]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]	5	3
glucosamine-6-phosphate deaminase activity [GO:0004342]; identical protein binding [GO:0042802]; isomerase activity [GO:0016853]	2	2
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]	1	NA
glucose-6-phosphate dehydrogenase activity [GO:0004345]; NADP binding [GO:0050661]	1	1
glucuronosyltransferase activity [GO:0015020]	2	3
glutamate dehydrogenase (NAD+) activity [GO:0004352]; UDP-glycosyltransferase activity [GO:0008194]	1	1
glutamate:sodium symporter activity [GO:0015501]; L-glutamate transmembrane transporter activity [GO:0005313]; neutral L-amino acid transmembrane transporter activity [GO:0015175]	1	1
glutaminyl-peptide cyclotransferase activity [GO:0016603]	1	1
glutathione disulfide oxidoreductase activity [GO:0015038]	1	1
glutathione hydrolase activity [GO:0036374]	1	2
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]	3	NA
glutathione transferase activity [GO:0004364]	11	9
glutathione transferase activity [GO:0004364]; maleylacetoacetate isomerase activity [GO:0016034]	1	1
glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity [GO:0004365]; NAD binding [GO:0051287]; NADP binding [GO:0050661]	1	1
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]	2	NA
glycerol-3-phosphate dehydrogenase [NAD(P)+] activity [GO:0047952]; NAD binding [GO:0051287]; protein homodimerization activity [GO:0042803]	1	1
glycine binding [GO:0016594]; glycine dehydrogenase (decarboxylating) activity [GO:0004375]; pyridoxal phosphate binding [GO:0030170]	1	1
glycine binding [GO:0016594]; glycine N-methyltransferase activity [GO:0017174]; identical protein binding [GO:0042802]; S-adenosyl-L-methionine binding [GO:1904047]	2	2
glycine hydroxymethyltransferase activity [GO:0004372]; mRNA 5’-UTR binding [GO:0048027]; mRNA regulatory element binding translation repressor activity [GO:0000900]; protein homodimerization activity [GO:0042803]; pyridoxal phosphate binding [GO:0030170]; serine binding [GO:0070905]; zinc ion binding [GO:0008270]	1	1
glycogen (starch) synthase activity [GO:0004373]	1	1
glycogen phosphorylase activity [GO:0008184]; linear malto-oligosaccharide phosphorylase activity [GO:0102250]; pyridoxal phosphate binding [GO:0030170]; SHG alpha-glucan phosphorylase activity [GO:0102499]	1	1
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]	1	NA
glycosyltransferase activity [GO:0016757]	1	1
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]	1	NA
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]	1	NA
GPI anchor binding [GO:0034235]	1	3
GTP binding [GO:0005525]	1	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]	18	12
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]; microtubule binding [GO:0008017]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]	1	NA
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; protein kinase binding [GO:0019901]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; ribosome binding [GO:0043022]; translation elongation factor activity [GO:0003746]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; signal recognition particle binding [GO:0005047]	1	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; structural constituent of cytoskeleton [GO:0005200]	2	2
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]	4	3
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]	1	NA
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]	1	NA
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]	1	NA
GTPase activator activity [GO:0005096]; Rab GDP-dissociation inhibitor activity [GO:0005093]	1	1
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]	1	NA
guanosine phosphorylase activity [GO:0047975]; purine-nucleoside phosphorylase activity [GO:0004731]	1	1
guanyl-nucleotide exchange factor activity [GO:0005085]	1	1
guanyl-nucleotide exchange factor activity [GO:0005085]; translation elongation factor activity [GO:0003746]	1	1
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	NA
heme binding [GO:0020037]; iron ion binding [GO:0005506]; monooxygenase activity [GO:0004497]; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen [GO:0016705]	13	26
heme binding [GO:0020037]; metal ion binding [GO:0046872]	1	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; oxygen binding [GO:0019825]; oxygen carrier activity [GO:0005344]	2	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; peroxidase activity [GO:0004601]	1	1
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]	1	NA
histone binding [GO:0042393]	3	2
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]	1	NA
Hsp90 protein binding [GO:0051879]	1	NA
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]	1	NA
hydro-lyase activity [GO:0016836]; L-fuconate dehydratase activity [GO:0050023]; magnesium ion binding [GO:0000287]	1	1
hydrolase activity [GO:0016787]	16	7
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds [GO:0016810]	1	1
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]	2	NA
hydrolase activity, acting on ester bonds [GO:0016788]	3	2
hydrolase activity, acting on ester bonds [GO:0016788]; zinc ion binding [GO:0008270]	1	1
hydrolase activity, acting on glycosyl bonds [GO:0016798]	3	2
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]	1	NA
hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]	1	NA
hydroxyacylglutathione hydrolase activity [GO:0004416]; metal ion binding [GO:0046872]	1	1
hydroxyisourate hydrolase activity [GO:0033971]	1	NA
hydroxymethylbilane synthase activity [GO:0004418]	1	NA
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]	1	NA
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]	1	NA
hydroxypyruvate isomerase activity [GO:0008903]	1	1
identical protein binding [GO:0042802]; ornithine(lysine) transaminase activity [GO:0050155]; ornithine-oxo-acid transaminase activity [GO:0004587]; pyridoxal phosphate binding [GO:0030170]	1	1
identical protein binding [GO:0042802]; potassium channel activity [GO:0005267]	1	1
IMP dehydrogenase activity [GO:0003938]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]	1	1
inorganic phosphate transmembrane transporter activity [GO:0005315]	1	1
inositol-3-phosphate synthase activity [GO:0004512]	1	NA
inositol monophosphate 1-phosphatase activity [GO:0008934]; inositol monophosphate 3-phosphatase activity [GO:0052832]; inositol monophosphate 4-phosphatase activity [GO:0052833]; metal ion binding [GO:0046872]	2	2
inositol oxygenase activity [GO:0050113]; iron ion binding [GO:0005506]	1	1
iodotyrosine deiodinase activity [GO:0140616]; oxidoreductase activity [GO:0016491]	1	1
iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-lysine 5-dioxygenase activity [GO:0008475]	1	NA
isocitrate dehydrogenase (NADP+) activity [GO:0004450]; magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]	2	2
isomerase activity [GO:0016853]	1	1
isopentenyl-diphosphate delta-isomerase activity [GO:0004452]	1	1
juvenile-hormone esterase activity [GO:0004453]	1	NA
kinase activity [GO:0016301]	1	NA
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]	1	NA
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]	1	NA
L-aspartate transmembrane transporter activity [GO:0015183]; L-glutamate transmembrane transporter activity [GO:0005313]; transmembrane transporter activity [GO:0022857]	1	1
L-aspartate:2-oxoglutarate aminotransferase activity [GO:0004069]; pyridoxal phosphate binding [GO:0030170]	2	2
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]	1	NA
L-gulonate 3-dehydrogenase activity [GO:0050104]; NAD+ binding [GO:0070403]; oxidoreductase activity [GO:0016491]	1	1
L-iditol 2-dehydrogenase activity [GO:0003939]; zinc ion binding [GO:0008270]	1	1
L-lactate dehydrogenase activity [GO:0004459]	1	NA
L-malate dehydrogenase activity [GO:0030060]	2	2
L-methionine-(S)-S-oxide reductase activity [GO:0036456]; peptide-methionine (S)-S-oxide reductase activity [GO:0008113]	1	NA
L-phosphoserine phosphatase activity [GO:0036424]; magnesium ion binding [GO:0000287]	1	1
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]	1	NA
large ribosomal subunit rRNA binding [GO:0070180]; structural constituent of ribosome [GO:0003735]	3	3
ligase activity [GO:0016874]; monooxygenase activity [GO:0004497]	1	1
lipase activity [GO:0016298]	3	3
lipid binding [GO:0008289]	1	1
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]	1	NA
lipid transporter activity [GO:0005319]	4	4
long-chain fatty acid-CoA ligase activity [GO:0004467]	1	1
lyase activity [GO:0016829]	1	NA
lyase activity [GO:0016829]; magnesium ion binding [GO:0000287]; thiamine pyrophosphate binding [GO:0030976]	1	1
lysozyme activity [GO:0003796]	2	2
macrolide binding [GO:0005527]; peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	1	1
magnesium ion binding [GO:0000287]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	1
magnesium ion binding [GO:0000287]; phosphoacetylglucosamine mutase activity [GO:0004610]	1	1
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]	1	NA
magnesium ion binding [GO:0000287]; phosphopyruvate hydratase activity [GO:0004634]	1	1
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]	1	NA
malonate-semialdehyde dehydrogenase (acetylating) activity [GO:0018478]; methylmalonate-semialdehyde dehydrogenase (acylating) activity [GO:0004491]	1	1
manganese ion binding [GO:0030145]; metalloaminopeptidase activity [GO:0070006]; peptidase activity [GO:0008233]	3	3
manganese ion binding [GO:0030145]; superoxide dismutase activity [GO:0004784]	1	1
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]	1	NA
mannose binding [GO:0005537]	2	2
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]	1	NA
metal ion binding [GO:0046872]	6	4
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]	1	NA
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]	1	1
metal ion binding [GO:0046872]; metallodipeptidase activity [GO:0070573]; peptidase activity [GO:0008233]	1	1
metal ion binding [GO:0046872]; metalloendopeptidase activity [GO:0004222]	4	3
metal ion binding [GO:0046872]; methyltransferase activity [GO:0008168]	1	1
metal ion binding [GO:0046872]; myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	2	2
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]	1	NA
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]	1	NA
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]	1	NA
metal ion binding [GO:0046872]; phytanoyl-CoA dioxygenase activity [GO:0048244]	1	1
metal ion binding [GO:0046872]; protein-glutamine gamma-glutamyltransferase activity [GO:0003810]	2	2
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]	1	NA
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]	1	NA
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	2	2
metal ion binding [GO:0046872]; serine-type peptidase activity [GO:0008236]	1	1
metal ion binding [GO:0046872]; thiamine pyrophosphate binding [GO:0030976]; transketolase activity [GO:0004802]	1	1
metal ion binding [GO:0046872]; transcription coregulator activity [GO:0003712]	2	3
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]	1	NA
metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	3	2
metalloaminopeptidase activity [GO:0070006]; peptide binding [GO:0042277]; zinc ion binding [GO:0008270]	2	2
metallocarboxypeptidase activity [GO:0004181]; zinc ion binding [GO:0008270]	5	2
metallodipeptidase activity [GO:0070573]	1	1
metallopeptidase activity [GO:0008237]	2	1
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]	1	NA
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]	1	NA
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]	1	NA
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	1	1
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]	1	NA
methylthioribulose 1-phosphate dehydratase activity [GO:0046570]; zinc ion binding [GO:0008270]	1	1
microtubule binding [GO:0008017]	1	2
microtubule plus-end binding [GO:0051010]	1	1
molecular adaptor activity [GO:0060090]	1	NA
monooxygenase activity [GO:0004497]	1	1
mRNA binding [GO:0003729]	7	1
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]	1	NA
mRNA binding [GO:0003729]; RNA binding [GO:0003723]	2	NA
mRNA binding [GO:0003729]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
mRNA binding [GO:0003729]; structural constituent of ribosome [GO:0003735]	2	3
mRNA binding [GO:0003729]; translation initiation factor activity [GO:0003743]	2	1
mRNA cap binding [GO:0098808]; translation initiation factor activity [GO:0003743]	1	1
myosin phosphatase activity [GO:0017018]; protein serine/threonine phosphatase activity [GO:0004722]	3	1
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]	1	NA
N-acetylglucosamine kinase activity [GO:0045127]	1	NA
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]	1	NA
N-acetylneuraminate lyase activity [GO:0008747]	1	NA
N-acetyltransferase activity [GO:0008080]	3	2
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]	1	NA
NAD binding [GO:0051287]; NADH dehydrogenase (ubiquinone) activity [GO:0008137]; quinone binding [GO:0048038]	1	1
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	1	NA
NAD binding [GO:0051287]; phosphoglycerate dehydrogenase activity [GO:0004617]	1	1
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]	1	NA
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]	1	NA
NADH dehydrogenase (ubiquinone) activity [GO:0008137]	1	2
NADP binding [GO:0050661]; phosphogluconate dehydrogenase (decarboxylating) activity [GO:0004616]	1	1
NEDD8 activating enzyme activity [GO:0019781]	1	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]	2	NA
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]	1	NA
nucleic acid binding [GO:0003676]	1	1
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]	1	NA
nucleoside triphosphate diphosphatase activity [GO:0047429]	1	NA
nucleotide binding [GO:0000166]	3	1
nucleotide binding [GO:0000166]; oxidoreductase activity [GO:0016491]	1	1
nucleotide binding [GO:0000166]; succinate-CoA ligase (ADP-forming) activity [GO:0004775]; succinate-CoA ligase (GDP-forming) activity [GO:0004776]	1	1
nucleotidyltransferase activity [GO:0016779]	1	NA
O-acyltransferase activity [GO:0008374]	1	NA
odorant binding [GO:0005549]	4	3
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]	1	NA
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]	1	NA
omega-amidase activity [GO:0050152]	1	1
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]	1	NA
oxidoreductase activity [GO:0016491]	14	7
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor [GO:0016671]	1	2
oxidoreductase activity [GO:0016491]; oxidoreductase activity, acting on the CH-CH group of donors [GO:0016627]	1	1
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]	2	2
oxidoreductase activity [GO:0016491]; polyamine oxidase activity [GO:0046592]; primary amine oxidase activity [GO:0008131]	1	1
oxidoreductase activity [GO:0016491]; ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation elongation factor activity [GO:0003746]	1	1
oxidoreductase activity [GO:0016491]; sarcosine dehydrogenase activity [GO:0008480]	1	1
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]	1	NA
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]	4	2
oxoglutarate dehydrogenase (succinyl-transferring) activity [GO:0004591]; thiamine pyrophosphate binding [GO:0030976]	2	1
palmitoyl-(protein) hydrolase activity [GO:0008474]	2	NA
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]	1	NA
palmitoyltransferase activity [GO:0016409]	1	1
peptidase activity [GO:0008233]	2	2
peptide alpha-N-acetyltransferase activity [GO:0004596]	1	NA
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]	3	1
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]	1	NA
peroxiredoxin activity [GO:0051920]	3	2
phosphatase activity [GO:0016791]	7	1
phosphatidylcholine binding [GO:0031210]; phosphatidylcholine transporter activity [GO:0008525]; phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	1	1
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]	1	NA
phosphatidylinositol binding [GO:0035091]	1	1
phosphatidylinositol bisphosphate binding [GO:1902936]	4	3
phospholipid scramblase activity [GO:0017128]	1	1
phosphomannomutase activity [GO:0004615]	1	NA
phosphoserine residue binding [GO:0050815]	1	1
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]	1	NA
pigment binding [GO:0031409]	1	NA
polyubiquitin modification-dependent protein binding [GO:0031593]	1	NA
porin activity [GO:0015288]; voltage-gated anion channel activity [GO:0008308]	1	1
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]	1	NA
protein-arginine N-methyltransferase activity [GO:0016274]	2	NA
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]	1	NA
protein-containing complex binding [GO:0044877]	2	1
protein-disulfide reductase (NAD(P)) activity [GO:0047134]	1	NA
protein-disulfide reductase activity [GO:0015035]	1	1
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]	1	NA
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]	1	NA
protein-N-terminal asparagine amidohydrolase activity [GO:0008418]	1	1
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]	1	NA
protein disulfide isomerase activity [GO:0003756]	3	3
protein disulfide isomerase activity [GO:0003756]; protein-disulfide reductase activity [GO:0015035]	1	1
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	1	NA
protein heterodimerization activity [GO:0046982]	1	NA
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]	1	NA
protein kinase activator activity [GO:0030295]; ribonucleoprotein complex binding [GO:0043021]; structural constituent of ribosome [GO:0003735]	1	1
protein kinase C binding [GO:0005080]; ribosome binding [GO:0043022]; translation regulator activity [GO:0045182]	1	1
protein phosphatase activator activity [GO:0072542]	1	1
protein phosphatase regulator activity [GO:0019888]	2	1
protein serine/threonine kinase activator activity [GO:0043539]	1	1
protein tag [GO:0031386]; ubiquitin-like protein ligase binding [GO:0044389]	1	NA
protein transmembrane transporter activity [GO:0008320]	1	2
protein transmembrane transporter activity [GO:0008320]; ribosome binding [GO:0043022]; signal sequence binding [GO:0005048]	1	1
proton-transporting ATP synthase activity, rotational mechanism [GO:0046933]	2	2
proton-transporting ATPase activity, rotational mechanism [GO:0046961]	7	7
proton transmembrane transporter activity [GO:0015078]	3	5
pseudouridine synthase activity [GO:0009982]; RNA binding [GO:0003723]	1	1
purine-nucleoside phosphorylase activity [GO:0004731]	1	NA
pyridoxal kinase activity [GO:0008478]	1	NA
pyridoxal phosphate binding [GO:0030170]	1	1
pyridoxal phosphate binding [GO:0030170]; transaminase activity [GO:0008483]	1	1
pyrophosphatase activity [GO:0016462]	1	NA
pyrroline-5-carboxylate reductase activity [GO:0004735]	1	1
pyruvate dehydrogenase (acetyl-transferring) activity [GO:0004739]	1	1
Rab geranylgeranyltransferase activity [GO:0004663]	1	NA
receptor tyrosine kinase binding [GO:0030971]; signaling adaptor activity [GO:0035591]	1	1
Rho GDP-dissociation inhibitor activity [GO:0005094]	1	1
ribonuclease P activity [GO:0004526]	1	1
ribose-5-phosphate isomerase activity [GO:0004751]	1	1
ribosome binding [GO:0043022]	1	NA
ribosome binding [GO:0043022]; RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	2
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]	1	NA
RNA binding [GO:0003723]	15	4
RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	1	1
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]	1	NA
RNA binding [GO:0003723]; structural constituent of ribosome [GO:0003735]	18	17
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]	2	NA
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]	2	2
RNA binding [GO:0003723]; zinc ion binding [GO:0008270]	1	1
rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	3	3
S-formylglutathione hydrolase activity [GO:0018738]	1	1
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]	1	NA
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]	1	NA
saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity [GO:0047131]; saccharopine dehydrogenase (NADP+, L-lysine-forming) activity [GO:0047130]; saccharopine dehydrogenase activity [GO:0004753]	1	1
scavenger receptor activity [GO:0005044]	1	3
selenium binding [GO:0008430]	1	1
sepiapterin reductase activity [GO:0004757]	1	NA
serine-type carboxypeptidase activity [GO:0004185]	1	NA
serine-type endopeptidase activity [GO:0004252]	40	19
serine-type endopeptidase inhibitor activity [GO:0004867]	11	6
serine-type peptidase activity [GO:0008236]	1	NA
serine transmembrane transporter activity [GO:0022889]; transmembrane transporter activity [GO:0022857]	2	2
signaling receptor activity [GO:0038023]	1	NA
signaling receptor binding [GO:0005102]	2	1
signaling receptor complex adaptor activity [GO:0030159]	1	1
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]	1	NA
single-stranded DNA binding [GO:0003697]	1	1
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]	1	NA
SNAP receptor activity [GO:0005484]	1	2
SNAP receptor activity [GO:0005484]; SNARE binding [GO:0000149]	1	1
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]	1	NA
snoRNA binding [GO:0030515]	2	2
soluble NSF attachment protein activity [GO:0005483]; syntaxin binding [GO:0019905]	1	1
spermidine synthase activity [GO:0004766]	1	NA
spermine synthase activity [GO:0016768]	1	NA
sterol binding [GO:0032934]	3	1
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]	1	NA
strictosidine synthase activity [GO:0016844]	1	1
structural constituent of chitin-based larval cuticle [GO:0008010]	2	18
structural constituent of cytoskeleton [GO:0005200]	1	1
structural constituent of ribosome [GO:0003735]	46	29
structural molecule activity [GO:0005198]	7	3
sulfotransferase activity [GO:0008146]	2	2
sulfur dioxygenase activity [GO:0050313]	1	1
sulfuric ester hydrolase activity [GO:0008484]	1	2
SUMO activating enzyme activity [GO:0019948]	1	NA
thioredoxin-disulfide reductase activity [GO:0004791]	1	1
thioredoxin peroxidase activity [GO:0008379]	1	1
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]	1	NA
transaminase activity [GO:0008483]	1	NA
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]	1	NA
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]	1	NA
translation elongation factor activity [GO:0003746]	3	1
translation initiation factor activity [GO:0003743]	3	1
transmembrane transporter activity [GO:0022857]	1	3
trehalose-phosphatase activity [GO:0004805]	1	1
triose-phosphate isomerase activity [GO:0004807]	1	1
tropomyosin binding [GO:0005523]	1	1
U1 snRNA binding [GO:0030619]	1	NA
U2 snRNA binding [GO:0030620]	1	NA
ubiquitin binding [GO:0043130]	2	1
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]	1	NA
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]	1	NA
UDP-glucose:glycoprotein glucosyltransferase activity [GO:0003980]	1	1
UDP-glycosyltransferase activity [GO:0008194]	3	5
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]	2	NA
unfolded protein binding [GO:0051082]	2	1
uroporphyrinogen decarboxylase activity [GO:0004853]	1	NA
UTP:glucose-1-phosphate uridylyltransferase activity [GO:0003983]	1	1
zinc ion binding [GO:0008270]	2	1
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]	NA	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	NA	1
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]	NA	2
acylglycerol lipase activity [GO:0047372]; palmitoyl-(protein) hydrolase activity [GO:0008474]; phospholipase activity [GO:0004620]	NA	1
ADP transmembrane transporter activity [GO:0015217]; AMP transmembrane transporter activity [GO:0080122]; ATP transmembrane transporter activity [GO:0005347]; coenzyme A transmembrane transporter activity [GO:0015228]; FAD transmembrane transporter activity [GO:0015230]; FMN transmembrane transporter activity [GO:0044610]; NAD transmembrane transporter activity [GO:0051724]	NA	1
alkylglycerone-phosphate synthase activity [GO:0008609]; FAD binding [GO:0071949]	NA	1
aminoacyl-tRNA hydrolase activity [GO:0004045]	NA	1
aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]	NA	1
amyloid-beta binding [GO:0001540]	NA	1
arylsulfatase activity [GO:0004065]	NA	1
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]	NA	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]	NA	2
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]	NA	1
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; nucleic acid binding [GO:0003676]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]	NA	1
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]	NA	1
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]	NA	1
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	NA	1
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]	NA	1
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]	NA	1
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]	NA	1
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]	NA	1
box H/ACA snoRNA binding [GO:0034513]; RNA binding [GO:0003723]	NA	1
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]	NA	1
calcium ion binding [GO:0005509]; mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [GO:0004571]	NA	1
calcium ion binding [GO:0005509]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]	NA	1
carbohydrate binding [GO:0030246]; galactoside binding [GO:0016936]	NA	1
chaperone binding [GO:0051087]; unfolded protein binding [GO:0051082]	NA	1
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]	NA	1
DNA binding, bending [GO:0008301]; transcription cis-regulatory region binding [GO:0000976]	NA	1
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]	NA	1
endopeptidase inhibitor activity [GO:0004866]; metalloendopeptidase inhibitor activity [GO:0008191]	NA	1
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]	NA	1
gap junction channel activity [GO:0005243]	NA	1
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]	NA	1
glycerol kinase activity [GO:0004370]	NA	1
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]	NA	1
integrin binding [GO:0005178]	NA	3
iron ion binding [GO:0005506]; stearoyl-CoA 9-desaturase activity [GO:0004768]	NA	1
lipase activity [GO:0016298]; metal ion binding [GO:0046872]; triglyceride lipase activity [GO:0004806]	NA	1
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]	NA	2
mechanosensitive ion channel activity [GO:0008381]	NA	1
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]	NA	1
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]	NA	1
metalloendopeptidase activity [GO:0004222]	NA	1
metalloexopeptidase activity [GO:0008235]	NA	1
misfolded protein binding [GO:0051787]; unfolded protein binding [GO:0051082]	NA	1
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]	NA	1
NADP-retinol dehydrogenase activity [GO:0052650]	NA	1
neurexin family protein binding [GO:0042043]; signaling receptor activity [GO:0038023]	NA	1
neuropeptide Y receptor activity [GO:0004983]	NA	1
nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]	NA	1
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]	NA	1
phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity [GO:0034597]	NA	1
phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]	NA	1
phosphatidylserine decarboxylase activity [GO:0004609]	NA	1
phosphotransferase activity, for other substituted phosphate groups [GO:0016780]; unfolded protein binding [GO:0051082]	NA	1
potassium channel regulator activity [GO:0015459]	NA	1
prostaglandin-E synthase activity [GO:0050220]	NA	1
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]	NA	1
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]	NA	1
small GTPase binding [GO:0031267]	NA	1
structural constituent of cuticle [GO:0042302]	NA	14
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]	NA	1
ubiquitin-protein transferase activity [GO:0004842]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; [acyl-carrier-protein] S-malonyltransferase activity [GO:0004314]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]; phosphopantetheine binding [GO:0031177]
(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity [GO:0008659]; 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity [GO:0008693]; 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity [GO:0047451]; 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity [GO:0004317]; 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity [GO:0004316]; 3-oxoacyl-[acyl-carrier-protein] synthase activity [GO:0004315]; [acyl-carrier-protein] S-acetyltransferase activity [GO:0004313]; enoyl-[acyl-carrier-protein] reductase (NADPH, A-specific) activity [GO:0047117]; fatty acid synthase activity [GO:0004312]; myristoyl-[acyl-carrier-protein] hydrolase activity [GO:0016295]; oleoyl-[acyl-carrier-protein] hydrolase activity [GO:0004320]; palmitoyl-[acyl-carrier-protein] hydrolase activity [GO:0016296]
(S)-citramalyl-CoA lyase activity [GO:0047777]; metal ion binding [GO:0046872]
13-prostaglandin reductase activity [GO:0036132]; 15-oxoprostaglandin 13-oxidase activity [GO:0047522]; 2-alkenal reductase [NAD(P)+] activity [GO:0032440]
2’-deoxyadenosine deaminase activity [GO:0046936]; adenosine deaminase activity [GO:0004000]
2 iron, 2 sulfur cluster binding [GO:0051537]; FAD binding [GO:0071949]; iron ion binding [GO:0005506]; oxidoreductase activity [GO:0016491]
3’-5’-exodeoxyribonuclease activity [GO:0008296]
3’-5’-exoribonuclease activity [GO:0000175]; nucleic acid binding [GO:0003676]
3’(2’),5’-bisphosphate nucleotidase activity [GO:0008441]; metal ion binding [GO:0046872]
3-dehydrosphinganine reductase activity [GO:0047560]
4-alpha-glucanotransferase activity [GO:0004134]; amylo-alpha-1,6-glucosidase activity [GO:0004135]
4 iron, 4 sulfur cluster binding [GO:0051539]; lipoate synthase activity [GO:0016992]; metal ion binding [GO:0046872]
5’-(N(7)-methyl 5’-triphosphoguanosine)-[mRNA] diphosphatase activity [GO:0140932]; m7G(5’)pppN diphosphatase activity [GO:0050072]; RNA 7-methylguanosine cap binding [GO:0000340]
5’-nucleotidase activity [GO:0008253]; magnesium ion binding [GO:0000287]; nucleotide binding [GO:0000166]; XMP 5’-nucleosidase activity [GO:0106411]
5’-nucleotidase activity [GO:0008253]; metal ion binding [GO:0046872]; nucleotide binding [GO:0000166]
5-oxoprolinase (ATP-hydrolyzing) activity [GO:0017168]
6-phosphofructo-2-kinase activity [GO:0003873]; ATP binding [GO:0005524]; fructose-2,6-bisphosphate 2-phosphatase activity [GO:0004331]
6-phosphogluconolactonase activity [GO:0017057]
6-pyruvoyltetrahydropterin synthase activity [GO:0003874]; metal ion binding [GO:0046872]
7S RNA binding [GO:0008312]; endoplasmic reticulum signal peptide binding [GO:0030942]
acetate-CoA ligase activity [GO:0003987]; AMP binding [GO:0016208]; ATP binding [GO:0005524]; monooxygenase activity [GO:0004497]
acetylcholinesterase activity [GO:0003990]
acid phosphatase activity [GO:0003993]
acid phosphatase activity [GO:0003993]; metal ion binding [GO:0046872]
acid sphingomyelin phosphodiesterase activity [GO:0061750]; hydrolase activity, acting on glycosyl bonds [GO:0016798]; metal ion binding [GO:0046872]; phosphoric diester hydrolase activity [GO:0008081]
acireductone synthase activity [GO:0043874]; magnesium ion binding [GO:0000287]
actin binding [GO:0003779]; Arp2/3 complex binding [GO:0071933]
actin binding [GO:0003779]; muscle alpha-actinin binding [GO:0051371]
actin filament binding [GO:0051015]; actin monomer binding [GO:0003785]
actin filament binding [GO:0051015]; protein-macromolecule adaptor activity [GO:0030674]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]
acyl-CoA dehydrogenase activity [GO:0003995]; butyryl-CoA dehydrogenase activity [GO:0004085]; flavin adenine dinucleotide binding [GO:0050660]; isovaleryl-CoA dehydrogenase activity [GO:0008470]
acyl-CoA dehydrogenase activity [GO:0003995]; flavin adenine dinucleotide binding [GO:0050660]; medium-chain-acyl-CoA dehydrogenase activity [GO:0070991]
acyl-CoA hydrolase activity [GO:0047617]
acyltransferase activity [GO:0016746]
adenine binding [GO:0002055]; adenine phosphoribosyltransferase activity [GO:0003999]; AMP binding [GO:0016208]
adenosine kinase activity [GO:0004001]; ATP binding [GO:0005524]
adenylate kinase activity [GO:0004017]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; nucleoside triphosphate adenylate kinase activity [GO:0046899]
ADP-ribose diphosphatase activity [GO:0047631]
ADP-ribosylglutamate hydrolase activity [GO:0140293]
alanine-glyoxylate transaminase activity [GO:0008453]; serine-pyruvate transaminase activity [GO:0004760]
alanine-tRNA ligase activity [GO:0004813]; amino acid binding [GO:0016597]; aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]; zinc ion binding [GO:0008270]
alcohol dehydrogenase (NAD+) activity [GO:0004022]; hydroxyacid-oxoacid transhydrogenase activity [GO:0047988]; metal ion binding [GO:0046872]
alkaline phosphatase activity [GO:0004035]; ATP binding [GO:0005524]; G protein-coupled receptor activity [GO:0004930]; RNA binding [GO:0003723]; tyrosine-tRNA ligase activity [GO:0004831]
alpha,alpha-trehalase activity [GO:0004555]
amino acid binding [GO:0016597]; aspartate carbamoyltransferase activity [GO:0004070]; ATP binding [GO:0005524]; carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity [GO:0004088]; dihydroorotase activity [GO:0004151]; metal ion binding [GO:0046872]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; isoleucine-tRNA ligase activity [GO:0004822]; tRNA binding [GO:0000049]
aminoacyl-tRNA editing activity [GO:0002161]; ATP binding [GO:0005524]; valine-tRNA ligase activity [GO:0004832]
aminoacyl-tRNA hydrolase activity [GO:0004045]; translation release factor activity, codon nonspecific [GO:0016150]
aminopeptidase activity [GO:0004177]; epoxide hydrolase activity [GO:0004301]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
aminopeptidase activity [GO:0004177]; metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]; metalloexopeptidase activity [GO:0008235]
aminopeptidase activity [GO:0004177]; serine-type endopeptidase activity [GO:0004252]; tripeptidyl-peptidase activity [GO:0008240]
amyloid-beta binding [GO:0001540]; calcium ion binding [GO:0005509]; kinesin binding [GO:0019894]; X11-like protein binding [GO:0042988]
arginine-tRNA ligase activity [GO:0004814]; ATP binding [GO:0005524]
aromatic-L-amino-acid decarboxylase activity [GO:0004058]; carboxy-lyase activity [GO:0016831]; pyridoxal phosphate binding [GO:0030170]
arylformamidase activity [GO:0004061]
asparagine synthase (glutamine-hydrolyzing) activity [GO:0004066]; ATP binding [GO:0005524]
aspartate-tRNA ligase activity [GO:0004815]; ATP binding [GO:0005524]; RNA binding [GO:0003723]
ATP-dependent peptidase activity [GO:0004176]; ATPase binding [GO:0051117]; serine-type endopeptidase activity [GO:0004252]
ATP binding [GO:0005524]; ATP-dependent NAD(P)H-hydrate dehydratase activity [GO:0047453]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]; plus-end-directed microtubule motor activity [GO:0008574]
ATP binding [GO:0005524]; calmodulin binding [GO:0005516]; calmodulin-dependent protein kinase activity [GO:0004683]
ATP binding [GO:0005524]; cyclin-dependent protein serine/threonine kinase activity [GO:0004693]
ATP binding [GO:0005524]; dephospho-CoA kinase activity [GO:0004140]
ATP binding [GO:0005524]; glutathione binding [GO:0043295]; glutathione synthase activity [GO:0004363]; magnesium ion binding [GO:0000287]
ATP binding [GO:0005524]; glycine-tRNA ligase activity [GO:0004820]; transferase activity [GO:0016740]
ATP binding [GO:0005524]; guanylate kinase activity [GO:0004385]
ATP binding [GO:0005524]; histidine-tRNA ligase activity [GO:0004821]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA binding [GO:0003723]; RNA helicase activity [GO:0003724]; translation initiation factor activity [GO:0003743]
ATP binding [GO:0005524]; hydrolase activity [GO:0016787]; mRNA binding [GO:0003729]; RNA helicase activity [GO:0003724]
ATP binding [GO:0005524]; iron ion binding [GO:0005506]; ribosomal small subunit binding [GO:0043024]
ATP binding [GO:0005524]; ligase activity [GO:0016874]; metal ion binding [GO:0046872]
ATP binding [GO:0005524]; lysine-tRNA ligase activity [GO:0004824]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; magnesium ion binding [GO:0000287]; phenylalanine-tRNA ligase activity [GO:0004826]; RNA binding [GO:0003723]
ATP binding [GO:0005524]; MAP kinase activity [GO:0004707]; protein serine kinase activity [GO:0106310]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; MAP kinase kinase activity [GO:0004708]; protein serine/threonine kinase activity [GO:0004674]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; molybdopterin adenylyltransferase activity [GO:0061598]; molybdopterin molybdotransferase activity [GO:0061599]
ATP binding [GO:0005524]; metal ion binding [GO:0046872]; SUMO activating enzyme activity [GO:0019948]
ATP binding [GO:0005524]; methionine-tRNA ligase activity [GO:0004825]
ATP binding [GO:0005524]; non-membrane spanning protein tyrosine kinase activity [GO:0004715]; nucleic acid binding [GO:0003676]; zinc ion binding [GO:0008270]
ATP binding [GO:0005524]; pantothenate kinase activity [GO:0004594]
ATP binding [GO:0005524]; proline-tRNA ligase activity [GO:0004827]
ATP binding [GO:0005524]; riboflavin kinase activity [GO:0008531]
ATP binding [GO:0005524]; serine-tRNA ligase activity [GO:0004828]; tRNA binding [GO:0000049]
ATP binding [GO:0005524]; threonine-tRNA ligase activity [GO:0004829]
ATP binding [GO:0005524]; tRNA binding [GO:0000049]; tyrosine-tRNA ligase activity [GO:0004831]
ATP binding [GO:0005524]; tryptophan-tRNA ligase activity [GO:0004830]
ATP binding [GO:0005524]; ubiquitin conjugating enzyme activity [GO:0061631]; ubiquitin protein ligase binding [GO:0031625]
ATP:3’-cytidine-cytidine-tRNA adenylyltransferase activity [GO:0052929]; tRNA binding [GO:0000049]
beta-galactosidase activity [GO:0004565]
beta-glucuronidase activity [GO:0004566]; carbohydrate binding [GO:0030246]
beta-mannosidase activity [GO:0004567]
beta-tubulin binding [GO:0048487]; microtubule binding [GO:0008017]
biliverdin reductase (NAD(P)+) activity [GO:0004074]; oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor [GO:0016646]; riboflavin reductase (NADPH) activity [GO:0042602]
bis(5’-nucleosyl)-tetraphosphatase (asymmetrical) activity [GO:0004081]; nucleotide binding [GO:0000166]
box H/ACA snoRNA binding [GO:0034513]
cadherin binding [GO:0045296]; calcium ion binding [GO:0005509]
calcium-dependent cysteine-type endopeptidase activity [GO:0004198]
calcium ion binding [GO:0005509]; calcium-dependent protein serine/threonine phosphatase regulator activity [GO:0008597]; phosphatase binding [GO:0019902]
calmodulin binding [GO:0005516]; protein-containing complex binding [GO:0044877]
cAMP binding [GO:0030552]; cAMP-dependent protein kinase regulator activity [GO:0008603]
carbohydrate binding [GO:0030246]; hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
carbon-sulfur lyase activity [GO:0016846]; cystathionine gamma-lyase activity [GO:0004123]; L-cysteine desulfhydrase activity [GO:0080146]; L-cystine L-cysteine-lyase (deaminating) [GO:0044540]; pyridoxal phosphate binding [GO:0030170]
carbonyl reductase (NADPH) activity [GO:0004090]; L-xylulose reductase (NADP+) activity [GO:0050038]
carboxy-lyase activity [GO:0016831]; glutamate decarboxylase activity [GO:0004351]; pyridoxal phosphate binding [GO:0030170]
carboxypeptidase activity [GO:0004180]; dipeptidyl-peptidase activity [GO:0008239]; serine-type peptidase activity [GO:0008236]
carboxypeptidase activity [GO:0004180]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]; peptidyl-dipeptidase activity [GO:0008241]
carboxypeptidase activity [GO:0004180]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
catalytic activity [GO:0003824]
catalytic activity [GO:0003824]; FAD binding [GO:0071949]
catalytic activity [GO:0003824]; protein phosphatase 1 binding [GO:0008157]; protein serine/threonine phosphatase inhibitor activity [GO:0004865]
chaperone binding [GO:0051087]; heat shock protein binding [GO:0031072]; protein kinase binding [GO:0019901]; unfolded protein binding [GO:0051082]
chaperone binding [GO:0051087]; Hsp90 protein binding [GO:0051879]
chaperone binding [GO:0051087]; misfolded protein binding [GO:0051787]
chitin binding [GO:0008061]; chitin deacetylase activity [GO:0004099]
chitin binding [GO:0008061]; oligosaccharide binding [GO:0070492]
cholesterol binding [GO:0015485]; ubiquitin protein ligase binding [GO:0031625]
chromatin binding [GO:0003682]
chromatin binding [GO:0003682]; histone binding [GO:0042393]
chromatin DNA binding [GO:0031490]; transcription coactivator activity [GO:0003713]
citrate (Si)-synthase activity [GO:0004108]; cysteine-type exopeptidase activity [GO:0070004]; dipeptidase activity [GO:0016805]
clathrin binding [GO:0030276]; phospholipid binding [GO:0005543]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]
CoA-ligase activity [GO:0016405]; monooxygenase activity [GO:0004497]; very long-chain fatty acid-CoA ligase activity [GO:0031957]
copper ion binding [GO:0005507]
cullin family protein binding [GO:0097602]
cystathionine beta-synthase activity [GO:0004122]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]
cysteine-type deubiquitinase activity [GO:0004843]; cysteine-type endopeptidase activity [GO:0004197]; zinc ion binding [GO:0008270]
cysteine-type deubiquitinase activity [GO:0004843]; proteasome binding [GO:0070628]
cysteine-type deubiquitinase activity [GO:0004843]; ubiquitin binding [GO:0043130]
cysteine desulfurase activity [GO:0031071]; iron-sulfur cluster binding [GO:0051536]; metal ion binding [GO:0046872]; pyridoxal phosphate binding [GO:0030170]
cytokine activity [GO:0005125]; receptor ligand activity [GO:0048018]; tumor necrosis factor receptor binding [GO:0005164]
D-amino-acid oxidase activity [GO:0003884]; FAD binding [GO:0071949]
D-ribulokinase activity [GO:0019150]
damaged DNA binding [GO:0003684]; metal ion binding [GO:0046872]; single-stranded telomeric DNA binding [GO:0043047]
dCMP deaminase activity [GO:0004132]; zinc ion binding [GO:0008270]
deaminase activity [GO:0019239]; guanine deaminase activity [GO:0008892]; zinc ion binding [GO:0008270]
deNEDDylase activity [GO:0019784]; metal ion binding [GO:0046872]; metallopeptidase activity [GO:0008237]
deoxyribose-phosphate aldolase activity [GO:0004139]
dihydrofolate reductase activity [GO:0004146]; NADP binding [GO:0050661]
dihydropyrimidinase activity [GO:0004157]
dimethylallyltranstransferase activity [GO:0004161]; geranyltranstransferase activity [GO:0004337]
dioxygenase activity [GO:0051213]
dITP diphosphatase activity [GO:0035870]; ITP diphosphatase activity [GO:0036220]; metal ion binding [GO:0046872]; nucleoside triphosphate diphosphatase activity [GO:0047429]; nucleotide binding [GO:0000166]; XTP diphosphatase activity [GO:0036222]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
DNA-binding transcription factor activity, RNA polymerase II-specific [GO:0000981]; RNA polymerase II cis-regulatory region sequence-specific DNA binding [GO:0000978]
DNA-binding transcription factor binding [GO:0140297]; NAD binding [GO:0051287]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]; transcription coactivator activity [GO:0003713]; transcription coregulator binding [GO:0001221]; transcription corepressor activity [GO:0003714]
DNA binding [GO:0003677]
DNA binding [GO:0003677]; DNA-directed 5’-3’ RNA polymerase activity [GO:0003899]
double-stranded RNA binding [GO:0003725]; ribonuclease III activity [GO:0004525]; structural constituent of ribosome [GO:0003735]
dynein complex binding [GO:0070840]
endopeptidase activator activity [GO:0061133]
endopeptidase inhibitor activity [GO:0004866]; proteasome binding [GO:0070628]
endoribonuclease activity [GO:0004521]; piRNA binding [GO:0034584]; RNA binding [GO:0003723]
enzyme activator activity [GO:0008047]; mRNA binding [GO:0003729]
enzyme regulator activity [GO:0030234]; glutamate-cysteine ligase catalytic subunit binding [GO:0035226]; ligase activity [GO:0016874]
ER retention sequence binding [GO:0046923]
eukaryotic initiation factor eIF2 binding [GO:0071074]; GDP-dissociation inhibitor activity [GO:0005092]; GTP binding [GO:0005525]; translation initiation factor activity [GO:0003743]
exopolyphosphatase activity [GO:0004309]
fatty-acyl-CoA binding [GO:0000062]
fatty acid elongase activity [GO:0009922]; very-long-chain 3-ketoacyl-CoA synthase activity [GO:0102756]
ferric iron binding [GO:0008199]; ferrous iron binding [GO:0008198]; ferroxidase activity [GO:0004322]
ferrochelatase activity [GO:0004325]
flavin-linked sulfhydryl oxidase activity [GO:0016971]; protein disulfide isomerase activity [GO:0003756]
FMN binding [GO:0010181]; pyridoxamine-phosphate oxidase activity [GO:0004733]
GABA receptor binding [GO:0050811]; ubiquitin protein ligase binding [GO:0031625]
gamma-glutamyl-peptidase activity [GO:0034722]
gamma-glutamylaminecyclotransferase activity [GO:0061929]
gamma-glutamylcyclotransferase activity [GO:0003839]
GDP-L-fucose synthase activity [GO:0050577]
GDP-mannose 4,6-dehydratase activity [GO:0008446]
glucosamine 6-phosphate N-acetyltransferase activity [GO:0004343]; monosaccharide binding [GO:0048029]; N-acetyltransferase activity [GO:0008080]
glutathione peroxidase activity [GO:0004602]; peroxidase activity [GO:0004601]
glycerate dehydrogenase activity [GO:0008465]; glyoxylate reductase (NADP+) activity [GO:0030267]; hydroxypyruvate reductase activity [GO:0016618]; NAD binding [GO:0051287]
glycosaminoglycan binding [GO:0005539]; N-sulfoglucosamine sulfohydrolase activity [GO:0016250]; sulfuric ester hydrolase activity [GO:0008484]
glycylpeptide N-tetradecanoyltransferase activity [GO:0004379]
GMP reductase activity [GO:0003920]; metal ion binding [GO:0046872]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; molecular adaptor activity [GO:0060090]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; translation elongation factor activity [GO:0003746]; translation release factor activity [GO:0003747]
GTP binding [GO:0005525]; mannose-1-phosphate guanylyltransferase (GTP) activity [GO:0004475]; nucleotidyltransferase activity [GO:0016779]
GTP binding [GO:0005525]; metal ion binding [GO:0046872]; phosphoenolpyruvate carboxykinase (GTP) activity [GO:0004613]
GTPase activator activity [GO:0005096]; small GTPase binding [GO:0031267]
guanyl-nucleotide exchange factor activity [GO:0005085]; translation initiation factor activity [GO:0003743]; translation initiation factor binding [GO:0031369]
heme binding [GO:0020037]; metal ion binding [GO:0046872]; tryptophan 2,3-dioxygenase activity [GO:0004833]
homogentisate 1,2-dioxygenase activity [GO:0004411]; metal ion binding [GO:0046872]
Hsp90 protein binding [GO:0051879]
hydro-lyase activity [GO:0016836]; hydrolase activity [GO:0016787]
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides [GO:0016811]
hydrolase activity, hydrolyzing N-glycosyl compounds [GO:0016799]
hydrolase activity, hydrolyzing O-glycosyl compounds [GO:0004553]
hydroxyisourate hydrolase activity [GO:0033971]
hydroxymethylbilane synthase activity [GO:0004418]
hydroxymethylglutaryl-CoA lyase activity [GO:0004419]; metal ion binding [GO:0046872]
hydroxymethylglutaryl-CoA synthase activity [GO:0004421]
inositol-3-phosphate synthase activity [GO:0004512]
iron ion binding [GO:0005506]; L-ascorbic acid binding [GO:0031418]; procollagen-lysine 5-dioxygenase activity [GO:0008475]
juvenile-hormone esterase activity [GO:0004453]
kinase activity [GO:0016301]
kinase activity [GO:0016301]; phospholipid binding [GO:0005543]
kynurenine-oxoglutarate transaminase activity [GO:0016212]; pyridoxal phosphate binding [GO:0030170]
L-galactose dehydrogenase activity [GO:0010349]; oxidoreductase activity [GO:0016491]
L-lactate dehydrogenase activity [GO:0004459]
L-methionine-(S)-S-oxide reductase activity [GO:0036456]; peptide-methionine (S)-S-oxide reductase activity [GO:0008113]
lactoylglutathione lyase activity [GO:0004462]; metal ion binding [GO:0046872]
lipid binding [GO:0008289]; phospholipid transporter activity [GO:0005548]
lyase activity [GO:0016829]
magnesium ion binding [GO:0000287]; phosphopentomutase activity [GO:0008973]
magnesium ion binding [GO:0000287]; ribose phosphate diphosphokinase activity [GO:0004749]
mannose-6-phosphate isomerase activity [GO:0004476]; zinc ion binding [GO:0008270]
medium-chain fatty acid-CoA ligase activity [GO:0031956]; monooxygenase activity [GO:0004497]
metal ion binding [GO:0046872]; metalloaminopeptidase activity [GO:0070006]
metal ion binding [GO:0046872]; N-acetylgalactosamine-6-phosphate deacetylase activity [GO:0047419]; N-acetylglucosamine-6-phosphate deacetylase activity [GO:0008448]
metal ion binding [GO:0046872]; NADHX epimerase activity [GO:0052856]; NADPHX epimerase activity [GO:0052857]; nucleotide binding [GO:0000166]
metal ion binding [GO:0046872]; peptidylamidoglycolate lyase activity [GO:0004598]
metal ion binding [GO:0046872]; protein serine/threonine phosphatase activity [GO:0004722]
metal ion binding [GO:0046872]; Rab geranylgeranyltransferase activity [GO:0004663]
metal ion binding [GO:0046872]; UDP-sugar diphosphatase activity [GO:0008768]
metallopeptidase activity [GO:0008237]; pre-mRNA intronic binding [GO:0097157]; U1 snRNA binding [GO:0030619]; U2 snRNA binding [GO:0030620]; U5 snRNA binding [GO:0030623]; U6 snRNA binding [GO:0017070]
metallopeptidase activity [GO:0008237]; proteasome binding [GO:0070628]
metallopeptidase activity [GO:0008237]; translation initiation factor activity [GO:0003743]
methenyltetrahydrofolate cyclohydrolase activity [GO:0004477]; methylenetetrahydrofolate dehydrogenase (NAD+) activity [GO:0004487]; methylenetetrahydrofolate dehydrogenase (NADP+) activity [GO:0004488]
molecular adaptor activity [GO:0060090]
mRNA binding [GO:0003729]; ribosome binding [GO:0043022]; translation initiation factor activity [GO:0003743]; tRNA binding [GO:0000049]
mRNA binding [GO:0003729]; RNA binding [GO:0003723]
myosin phosphatase activity [GO:0017018]; RNA polymerase II CTD heptapeptide repeat phosphatase activity [GO:0008420]
N-acetylglucosamine kinase activity [GO:0045127]
N-acetylmuramoyl-L-alanine amidase activity [GO:0008745]; peptidoglycan binding [GO:0042834]; zinc ion binding [GO:0008270]
N-acetylneuraminate lyase activity [GO:0008747]
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity [GO:0003948]
NAD binding [GO:0051287]; NADP binding [GO:0050661]; oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [GO:0016616]
NAD binding [GO:0051287]; UDP-glucose 6-dehydrogenase activity [GO:0003979]
NAD+ ADP-ribosyltransferase activity [GO:0003950]; NAD+-protein-arginine ADP-ribosyltransferase activity [GO:0106274]; nucleotidyltransferase activity [GO:0016779]
NEDD8 activating enzyme activity [GO:0019781]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]
nuclear import signal receptor activity [GO:0061608]; nuclear localization sequence binding [GO:0008139]; small GTPase binding [GO:0031267]
nucleic acid binding [GO:0003676]; poly(A)-specific ribonuclease activity [GO:0004535]
nucleoside triphosphate diphosphatase activity [GO:0047429]
nucleotidyltransferase activity [GO:0016779]
O-acyltransferase activity [GO:0008374]
odorant binding [GO:0005549]; olfactory receptor activity [GO:0004984]
oligopeptidase activity [GO:0070012]; serine-type endopeptidase activity [GO:0004252]
orotate phosphoribosyltransferase activity [GO:0004588]; orotidine-5’-phosphate decarboxylase activity [GO:0004590]
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor [GO:0016620]
palmitoyl-(protein) hydrolase activity [GO:0008474]
palmitoyl-(protein) hydrolase activity [GO:0008474]; thiolester hydrolase activity [GO:0016790]
peptide alpha-N-acetyltransferase activity [GO:0004596]
peptidyl-prolyl cis-trans isomerase activity [GO:0003755]; protein tyrosine phosphatase activator activity [GO:0008160]
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity [GO:0004439]
phosphomannomutase activity [GO:0004615]
phosphotransferase activity, alcohol group as acceptor [GO:0016773]; sedoheptulokinase activity [GO:0050277]
pigment binding [GO:0031409]
polyubiquitin modification-dependent protein binding [GO:0031593]
porphobilinogen synthase activity [GO:0004655]; zinc ion binding [GO:0008270]
protein-arginine N-methyltransferase activity [GO:0016274]
protein-arginine omega-N symmetric methyltransferase activity [GO:0035243]
protein-disulfide reductase (NAD(P)) activity [GO:0047134]
protein-L-isoaspartate (D-aspartate) O-methyltransferase activity [GO:0004719]
protein-macromolecule adaptor activity [GO:0030674]; translation elongation factor activity [GO:0003746]
protein dimerization activity [GO:0046983]; ubiquitin protein ligase activity [GO:0061630]; ubiquitin-protein transferase activity [GO:0004842]
protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]
protein heterodimerization activity [GO:0046982]
protein homodimerization activity [GO:0042803]; RNA binding [GO:0003723]
protein tag [GO:0031386]; ubiquitin-like protein ligase binding [GO:0044389]
purine-nucleoside phosphorylase activity [GO:0004731]
pyridoxal kinase activity [GO:0008478]
pyrophosphatase activity [GO:0016462]
Rab geranylgeranyltransferase activity [GO:0004663]
ribosome binding [GO:0043022]
RNA 7-methylguanosine cap binding [GO:0000340]; translation initiation factor activity [GO:0003743]
RNA binding [GO:0003723]; sequence-specific DNA binding [GO:0043565]; single-stranded DNA binding [GO:0003697]
RNA binding [GO:0003723]; translation initiation factor activity [GO:0003743]
S-methyl-5-thioadenosine phosphorylase activity [GO:0017061]
S-methyl-5-thioribose-1-phosphate isomerase activity [GO:0046523]
sepiapterin reductase activity [GO:0004757]
serine-type carboxypeptidase activity [GO:0004185]
serine-type peptidase activity [GO:0008236]
signaling receptor activity [GO:0038023]
single-stranded DNA 3’-5’ exodeoxyribonuclease activity [GO:0008310]
single-stranded DNA binding [GO:0003697]; single-stranded RNA binding [GO:0003727]; translation initiation factor binding [GO:0031369]
SNARE binding [GO:0000149]; zinc ion binding [GO:0008270]
spermidine synthase activity [GO:0004766]
spermine synthase activity [GO:0016768]
sterol binding [GO:0032934]; sterol transporter activity [GO:0015248]
SUMO activating enzyme activity [GO:0019948]
trans-2-enoyl-CoA reductase (NADPH) activity [GO:0019166]
transaminase activity [GO:0008483]
transferase activity [GO:0016740]; zinc ion binding [GO:0008270]
transferase activity, transferring alkyl or aryl (other than methyl) groups [GO:0016765]
U1 snRNA binding [GO:0030619]
U2 snRNA binding [GO:0030620]
ubiquitin binding [GO:0043130]; ubiquitin protein ligase binding [GO:0031625]
UDP-glucose 4-epimerase activity [GO:0003978]; UDP-N-acetylglucosamine 4-epimerase activity [GO:0003974]
UDP-N-acetylglucosamine diphosphorylase activity [GO:0003977]
uroporphyrinogen decarboxylase activity [GO:0004853]

kable(BP[is.na(BP[,2])==TRUE,1])

x
ABC-type heme transporter activity [GO:0015439]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]; heme binding [GO:0020037]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]
ABC-type transporter activity [GO:0140359]; ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATPase-coupled transmembrane transporter activity [GO:0042626]
acylglycerol lipase activity [GO:0047372]; palmitoyl-(protein) hydrolase activity [GO:0008474]; phospholipase activity [GO:0004620]
ADP transmembrane transporter activity [GO:0015217]; AMP transmembrane transporter activity [GO:0080122]; ATP transmembrane transporter activity [GO:0005347]; coenzyme A transmembrane transporter activity [GO:0015228]; FAD transmembrane transporter activity [GO:0015230]; FMN transmembrane transporter activity [GO:0044610]; NAD transmembrane transporter activity [GO:0051724]
alkylglycerone-phosphate synthase activity [GO:0008609]; FAD binding [GO:0071949]
aminoacyl-tRNA hydrolase activity [GO:0004045]
aminopeptidase activity [GO:0004177]; metallopeptidase activity [GO:0008237]; zinc ion binding [GO:0008270]
amyloid-beta binding [GO:0001540]
arylsulfatase activity [GO:0004065]
aspartic endopeptidase activity, intramembrane cleaving [GO:0042500]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent peptidase activity [GO:0004176]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]
ATP binding [GO:0005524]; ATP hydrolysis activity [GO:0016887]; ATP-dependent protein folding chaperone [GO:0140662]; heat shock protein binding [GO:0031072]; misfolded protein binding [GO:0051787]; nucleic acid binding [GO:0003676]; protein folding chaperone [GO:0044183]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; chaperone binding [GO:0051087]; Hsp70 protein binding [GO:0030544]; metal ion binding [GO:0046872]; unfolded protein binding [GO:0051082]
ATP binding [GO:0005524]; dynein intermediate chain binding [GO:0045505]; dynein light intermediate chain binding [GO:0051959]; minus-end-directed microtubule motor activity [GO:0008569]
ATP binding [GO:0005524]; glycerol kinase activity [GO:0004370]; phosphotransferase activity, alcohol group as acceptor [GO:0016773]
ATP binding [GO:0005524]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
ATP binding [GO:0005524]; microtubule binding [GO:0008017]; microtubule motor activity [GO:0003777]
ATPase binding [GO:0051117]; ATPase inhibitor activity [GO:0042030]
ATPase binding [GO:0051117]; proton-transporting ATPase activity, rotational mechanism [GO:0046961]
beta-glucosidase activity [GO:0008422]; glucosylceramidase activity [GO:0004348]
box H/ACA snoRNA binding [GO:0034513]; RNA binding [GO:0003723]
calcium channel regulator activity [GO:0005246]; calcium ion binding [GO:0005509]
calcium ion binding [GO:0005509]; mannosyl-oligosaccharide 1,2-alpha-mannosidase activity [GO:0004571]
calcium ion binding [GO:0005509]; metalloendopeptidase activity [GO:0004222]; zinc ion binding [GO:0008270]
carbohydrate binding [GO:0030246]; galactoside binding [GO:0016936]
chaperone binding [GO:0051087]; unfolded protein binding [GO:0051082]
cytidine deaminase activity [GO:0004126]; deoxycytidine deaminase activity [GO:0047844]; zinc ion binding [GO:0008270]
DNA binding, bending [GO:0008301]; transcription cis-regulatory region binding [GO:0000976]
endonuclease activity [GO:0004519]; endoribonuclease activity [GO:0004521]; metal ion binding [GO:0046872]; nucleic acid binding [GO:0003676]; single-stranded DNA endodeoxyribonuclease activity [GO:0000014]
endopeptidase inhibitor activity [GO:0004866]; metalloendopeptidase inhibitor activity [GO:0008191]
FAD binding [GO:0071949]; NAD(P)H oxidase H2O2-forming activity [GO:0016174]; oxidoreductase activity, acting on NAD(P)H [GO:0016651]; protein dimerization activity [GO:0046983]
gap junction channel activity [GO:0005243]
glycerol-3-phosphate O-acyltransferase activity [GO:0004366]
glycerol kinase activity [GO:0004370]
GTP binding [GO:0005525]; GTPase activity [GO:0003924]; lipid binding [GO:0008289]
integrin binding [GO:0005178]
iron ion binding [GO:0005506]; stearoyl-CoA 9-desaturase activity [GO:0004768]
lipase activity [GO:0016298]; metal ion binding [GO:0046872]; triglyceride lipase activity [GO:0004806]
long-chain fatty acid transporter activity [GO:0005324]; long-chain fatty acid-CoA ligase activity [GO:0004467]; monooxygenase activity [GO:0004497]
mechanosensitive ion channel activity [GO:0008381]
metal ion binding [GO:0046872]; RNA binding [GO:0003723]; rRNA binding [GO:0019843]; structural constituent of ribosome [GO:0003735]
metal ion binding [GO:0046872]; ubiquinol-cytochrome-c reductase activity [GO:0008121]
metalloendopeptidase activity [GO:0004222]
metalloexopeptidase activity [GO:0008235]
misfolded protein binding [GO:0051787]; unfolded protein binding [GO:0051082]
NAD binding [GO:0051287]; NAD(P)+ transhydrogenase activity [GO:0008746]; NADP binding [GO:0050661]
NADP-retinol dehydrogenase activity [GO:0052650]
neurexin family protein binding [GO:0042043]; signaling receptor activity [GO:0038023]
neuropeptide Y receptor activity [GO:0004983]
nuclear export signal receptor activity [GO:0005049]; small GTPase binding [GO:0031267]
phosphatidylinositol-4-phosphate phosphatase activity [GO:0043812]
phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity [GO:0034597]
phosphatidylinositol binding [GO:0035091]; phosphatidylinositol transfer activity [GO:0008526]
phosphatidylserine decarboxylase activity [GO:0004609]
phosphotransferase activity, for other substituted phosphate groups [GO:0016780]; unfolded protein binding [GO:0051082]
potassium channel regulator activity [GO:0015459]
prostaglandin-E synthase activity [GO:0050220]
protein tag [GO:0031386]; structural constituent of ribosome [GO:0003735]; ubiquitin protein ligase binding [GO:0031625]
purine-rich negative regulatory element binding [GO:0032422]; RNA polymerase II transcription regulatory region sequence-specific DNA binding [GO:0000977]
small GTPase binding [GO:0031267]
structural constituent of cuticle [GO:0042302]
structural constituent of ribosome [GO:0003735]; zinc ion binding [GO:0008270]
ubiquitin-protein transferase activity [GO:0004842]

################################# cellular.component
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..cellular.component.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..cellular.component.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")

colnames(BP) <- c("Function", "D2","D2pool")
kable(BP)

Function	D2	D2pool
6-phosphofructokinase complex [GO:0005945]	1	1
actin cytoskeleton [GO:0015629]; adherens junction [GO:0005912]; cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	1
actin cytoskeleton [GO:0015629]; cytoplasm [GO:0005737]	2	1
actin filament [GO:0005884]	1	1
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]	1	NA
adherens junction [GO:0005912]; apical part of cell [GO:0045177]; filopodium [GO:0030175]; microvillus [GO:0005902]; plasma membrane [GO:0005886]	1	1
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]	1	NA
adherens junction [GO:0005912]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; membrane [GO:0016020]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	1
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]	2	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; methionyl glutamyl tRNA synthetase complex [GO:0017102]	1	1
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]	1	NA
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1
AP-2 adaptor complex [GO:0030122]	1	1
AP-2 adaptor complex [GO:0030122]; cytoplasmic vesicle [GO:0031410]	1	1
AP-2 adaptor complex [GO:0030122]; intracellular membrane-bounded organelle [GO:0043231]	1	1
apical plasma membrane [GO:0016324]; cytoplasm [GO:0005737]; membrane [GO:0016020]	1	1
Arp2/3 protein complex [GO:0005885]	1	NA
Arp2/3 protein complex [GO:0005885]; cytoplasm [GO:0005737]	4	1
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]	1	NA
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]	1	NA
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]	1	NA
axon [GO:0030424]; plasma membrane [GO:0005886]	1	1
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]	1	NA
axoneme [GO:0005930]	1	NA
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]	1	NA
basement membrane [GO:0005604]	2	2
basement membrane [GO:0005604]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	1
basement membrane [GO:0005604]; membrane [GO:0016020]	1	1
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]	1	NA
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]	1	NA
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; precatalytic spliceosome [GO:0071011]; small-subunit processome [GO:0032040]; U4/U6 x U5 tri-snRNP complex [GO:0046540]	1	1
box C/D RNP complex [GO:0031428]; nucleolus [GO:0005730]; small-subunit processome [GO:0032040]	2	2
box H/ACA snoRNP complex [GO:0031429]	2	2
calcineurin complex [GO:0005955]	1	NA
cAMP-dependent protein kinase complex [GO:0005952]	2	NA
catalytic step 2 spliceosome [GO:0071013]	1	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; cytosol [GO:0005829]; precatalytic spliceosome [GO:0071011]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]	1	NA
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]	1	NA
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]	1	NA
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]	1	NA
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]	1	NA
catenin complex [GO:0016342]	1	NA
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]	1	NA
cell-cell junction [GO:0005911]; plasma membrane [GO:0005886]	1	2
cell cortex [GO:0005938]; cell projection [GO:0042995]; cytoplasmic vesicle [GO:0031410]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	2	2
cell cortex [GO:0005938]; clathrin coat of coated pit [GO:0030132]; clathrin coat of trans-Golgi network vesicle [GO:0030130]; clathrin complex [GO:0071439]; clathrin-coated endocytic vesicle [GO:0045334]	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]	1	1
cell cortex [GO:0005938]; cytoskeleton [GO:0005856]; cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	1	1
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]	1	NA
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]	1	NA
cell projection [GO:0042995]; cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; plasma membrane [GO:0005886]	1	1
cellular anatomical entity [GO:0110165]	5	2
chaperonin-containing T-complex [GO:0005832]	4	4
chitin-based extracellular matrix [GO:0062129]	2	18
chromatin [GO:0000785]; nucleolus [GO:0005730]	1	1
chromatin [GO:0000785]; nucleus [GO:0005634]	2	NA
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	1	NA
clathrin-coated pit [GO:0005905]; cytoplasm [GO:0005737]; cytosol [GO:0005829]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]; microtubule [GO:0005874]; mitochondrial outer membrane [GO:0005741]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]; synaptic vesicle membrane [GO:0030672]	1	1
clathrin-coated pit [GO:0005905]; very-low-density lipoprotein particle [GO:0034361]	1	1
clathrin-coated vesicle [GO:0030136]; cytoskeleton [GO:0005856]; focal adhesion [GO:0005925]; ruffle [GO:0001726]	1	1
clathrin adaptor complex [GO:0030131]	1	1
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]	1	NA
clathrin vesicle coat [GO:0030125]	1	NA
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA
collagen-containing extracellular matrix [GO:0062023]	1	1
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]	3	NA
COPI vesicle coat [GO:0030126]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	1	1
COPI vesicle coat [GO:0030126]; Golgi membrane [GO:0000139]	4	4
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]; membrane [GO:0016020]	2	3
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi membrane [GO:0000139]	2	2
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]	2	NA
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]	1	NA
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]	1	NA
cortical actin cytoskeleton [GO:0030864]	1	1
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]	1	NA
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]	1	NA
cytoplasm [GO:0005737]	116	62
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]	1	NA
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]	1	1
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; dystroglycan complex [GO:0016011]; extracellular space [GO:0005615]; nucleoplasm [GO:0005654]; postsynaptic membrane [GO:0045211]; sarcolemma [GO:0042383]	1	1
cytoplasm [GO:0005737]; cytoskeleton [GO:0005856]; myosin complex [GO:0016459]; sarcomere [GO:0030017]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]	2	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]	1	NA
cytoplasm [GO:0005737]; cytosol [GO:0005829]; mitochondrial intermembrane space [GO:0005758]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]	1	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; nucleus [GO:0005634]; plasma membrane [GO:0005886]	2	2
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	NA
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]	1	NA
cytoplasm [GO:0005737]; F-actin capping protein complex [GO:0008290]	1	1
cytoplasm [GO:0005737]; glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]	1	NA
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	2	1
cytoplasm [GO:0005737]; heterotrimeric G-protein complex [GO:0005834]	1	1
cytoplasm [GO:0005737]; intracellular membrane-bounded organelle [GO:0043231]	2	1
cytoplasm [GO:0005737]; intracellular organelle [GO:0043229]	1	1
cytoplasm [GO:0005737]; lysosome [GO:0005764]	4	1
cytoplasm [GO:0005737]; membrane-bounded organelle [GO:0043227]; plasma membrane [GO:0005886]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]	2	2
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; nuclear envelope [GO:0005635]	1	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; peroxisome [GO:0005777]	1	2
cytoplasm [GO:0005737]; microtubule [GO:0005874]	2	2
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]	1	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]	1	NA
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]; mitochondrial respiratory chain complex I [GO:0005747]	1	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]	5	2
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	NA
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisomal matrix [GO:0005782]; peroxisome [GO:0005777]	1	1
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]	1	NA
cytoplasm [GO:0005737]; myosin complex [GO:0016459]	1	1
cytoplasm [GO:0005737]; myosin filament [GO:0032982]; myosin II complex [GO:0016460]	1	1
cytoplasm [GO:0005737]; myosin II complex [GO:0016460]	1	1
cytoplasm [GO:0005737]; nascent polypeptide-associated complex [GO:0005854]	1	1
cytoplasm [GO:0005737]; NatA complex [GO:0031415]	1	1
cytoplasm [GO:0005737]; neuron projection [GO:0043005]	1	NA
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]	2	NA
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]	1	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]	1	NA
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]	1	NA
cytoplasm [GO:0005737]; nucleus [GO:0005634]	18	7
cytoplasm [GO:0005737]; nucleus [GO:0005634]; polysome [GO:0005844]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]; synapse [GO:0045202]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	5	3
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytoplasm [GO:0005737]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	2	2
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	NA
cytoplasm [GO:0005737]; plasma membrane [GO:0005886]	1	3
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]	2	NA
cytoplasm [GO:0005737]; proteasome regulatory particle, base subcomplex [GO:0008540]	3	3
cytoplasm [GO:0005737]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1
cytoplasm [GO:0005737]; protein phosphatase type 2A complex [GO:0000159]	1	1
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]	1	NA
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA
cytoplasm [GO:0005737]; ribose phosphate diphosphokinase complex [GO:0002189]	2	1
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]	2	NA
cytoplasmic microtubule [GO:0005881]; microtubule organizing center [GO:0005815]; microtubule plus-end [GO:0035371]; spindle midzone [GO:0051233]; spindle pole [GO:0000922]	1	1
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]	1	NA
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]	1	NA
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]	1	NA
cytoskeleton [GO:0005856]	1	1
cytoskeleton [GO:0005856]; membrane [GO:0016020]	1	NA
cytosol [GO:0005829]	45	23
cytosol [GO:0005829]; cytosolic small ribosomal subunit [GO:0022627]	1	1
cytosol [GO:0005829]; early endosome [GO:0005769]; endomembrane system [GO:0012505]; phagocytic vesicle [GO:0045335]	1	1
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	1
cytosol [GO:0005829]; endoplasmic reticulum membrane [GO:0005789]	1	1
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]	1	NA
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]	1	NA
cytosol [GO:0005829]; eukaryotic translation elongation factor 1 complex [GO:0005853]	1	1
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]	1	NA
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]	1	NA
cytosol [GO:0005829]; membrane [GO:0016020]; mitochondrion [GO:0005739]	1	1
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]	5	3
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]	1	NA
cytosol [GO:0005829]; mitochondrion [GO:0005739]; peroxisome [GO:0005777]	1	1
cytosol [GO:0005829]; nascent polypeptide-associated complex [GO:0005854]; polysomal ribosome [GO:0042788]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]	12	2
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, alpha-subunit complex [GO:0019773]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	NA
cytosol [GO:0005829]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; ribosome [GO:0005840]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; RISC complex [GO:0016442]	1	1
cytosol [GO:0005829]; nucleus [GO:0005634]; VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	1
cytosol [GO:0005829]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; protein-containing complex [GO:0032991]	1	1
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]	1	NA
cytosol [GO:0005829]; small ribosomal subunit [GO:0015935]	1	1
cytosolic large ribosomal subunit [GO:0022625]	30	30
cytosolic large ribosomal subunit [GO:0022625]; large ribosomal subunit [GO:0015934]	1	1
cytosolic large ribosomal subunit [GO:0022625]; ribosome [GO:0005840]	1	1
cytosolic proteasome complex [GO:0031597]; nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]	1	1
cytosolic small ribosomal subunit [GO:0022627]	13	12
cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	1	1
cytosolic small ribosomal subunit [GO:0022627]; ribosome [GO:0005840]	1	1
cytosolic small ribosomal subunit [GO:0022627]; rough endoplasmic reticulum [GO:0005791]	1	2
cytosolic small ribosomal subunit [GO:0022627]; small-subunit processome [GO:0032040]	1	1
cytosolic small ribosomal subunit [GO:0022627]; small ribosomal subunit [GO:0015935]	2	2
dendrite [GO:0030425]	1	1
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]	1	NA
DNA polymerase complex [GO:0042575]; nucleosome [GO:0000786]	1	1
DNA replication factor A complex [GO:0005662]	1	NA
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; endomembrane system [GO:0012505]; endosome [GO:0005768]; plasma membrane [GO:0005886]	1	1
early endosome [GO:0005769]; endocytic vesicle [GO:0030139]; intracellular membrane-bounded organelle [GO:0043231]; perinuclear region of cytoplasm [GO:0048471]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]	1	1
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]	1	NA
early endosome [GO:0005769]; extracellular space [GO:0005615]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]	2	2
early endosome [GO:0005769]; plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]	1	1
early endosome membrane [GO:0031901]; endoplasmic reticulum membrane [GO:0005789]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]; membrane [GO:0016020]; multivesicular body membrane [GO:0032585]; plasma membrane [GO:0005886]; recycling endosome membrane [GO:0055038]; transport vesicle membrane [GO:0030658]	1	1
EKC/KEOPS complex [GO:0000408]	1	NA
elongator holoenzyme complex [GO:0033588]	1	NA
elongin complex [GO:0070449]	1	NA
endomembrane system [GO:0012505]	2	1
endomembrane system [GO:0012505]; endoplasmic reticulum-endosome membrane contact site [GO:0140284]; membrane [GO:0016020]	1	1
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]	1	NA
endomembrane system [GO:0012505]; membrane [GO:0016020]	1	1
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]	1	NA
endopeptidase Clp complex [GO:0009368]	1	NA
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	NA
endoplasmic reticulum [GO:0005783]	4	3
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]	1	NA
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum lumen [GO:0005788]	3	2
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]	2	2
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]	1	NA
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]; Golgi apparatus [GO:0005794]; lysosome [GO:0005764]	1	1
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]	2	NA
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	2	4
endoplasmic reticulum [GO:0005783]; perinuclear region of cytoplasm [GO:0048471]	1	1
endoplasmic reticulum chaperone complex [GO:0034663]	1	1
endoplasmic reticulum lumen [GO:0005788]	4	2
endoplasmic reticulum lumen [GO:0005788]; endoplasmic reticulum membrane [GO:0005789]	1	1
endoplasmic reticulum membrane [GO:0005789]	15	13
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]	1	1
endoplasmic reticulum membrane [GO:0005789]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; endoplasmic reticulum-Golgi intermediate compartment membrane [GO:0033116]; ER to Golgi transport vesicle membrane [GO:0012507]; Golgi membrane [GO:0000139]; melanosome [GO:0042470]; SNARE complex [GO:0031201]	1	1
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]	1	NA
endoplasmic reticulum membrane [GO:0005789]; extrinsic component of cytoplasmic side of plasma membrane [GO:0031234]	2	1
endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	1	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]	1	1
endoplasmic reticulum membrane [GO:0005789]; membrane [GO:0016020]; signal recognition particle receptor complex [GO:0005785]	1	1
endoplasmic reticulum membrane [GO:0005789]; plasma membrane [GO:0005886]	1	2
endosome [GO:0005768]; Golgi apparatus [GO:0005794]; insulin-responsive compartment [GO:0032593]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; recycling endosome [GO:0055037]; synaptic vesicle [GO:0008021]	1	1
endosome [GO:0005768]; intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]; synaptic vesicle [GO:0008021]; trans-Golgi network transport vesicle [GO:0030140]	1	1
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]	1	NA
ESC/E(Z) complex [GO:0035098]; nucleus [GO:0005634]; NuRD complex [GO:0016581]	1	1
ESCRT I complex [GO:0000813]	1	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]	5	5
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]	1	NA
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3e [GO:0071540]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]; multi-eIF complex [GO:0043614]	1	1
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex, eIF3m [GO:0071541]	1	1
eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 2 complex [GO:0005850]; eukaryotic translation initiation factor 2B complex [GO:0005851]; multi-eIF complex [GO:0043614]	1	1
eukaryotic translation elongation factor 1 complex [GO:0005853]	1	NA
eukaryotic translation initiation factor 2B complex [GO:0005851]	2	NA
eukaryotic translation initiation factor 4F complex [GO:0016281]	2	NA
external side of plasma membrane [GO:0009897]	1	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]	1	1
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]	1	NA
extracellular region [GO:0005576]	22	17
extracellular region [GO:0005576]; membrane [GO:0016020]	2	NA
extracellular space [GO:0005615]	36	24
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]	1	NA
extracellular space [GO:0005615]; lysosome [GO:0005764]	12	7
extracellular space [GO:0005615]; membrane [GO:0016020]	4	3
extracellular space [GO:0005615]; plasma membrane [GO:0005886]	1	NA
F-actin capping protein complex [GO:0008290]	1	1
GET complex [GO:0043529]	1	NA
glutamate-cysteine ligase complex [GO:0017109]	2	1
glycerol-3-phosphate dehydrogenase complex [GO:0009331]	2	2
glycine cleavage complex [GO:0005960]; mitochondrion [GO:0005739]	1	1
GMP reductase complex [GO:1902560]	1	NA
Golgi apparatus [GO:0005794]	1	NA
Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	1	1
Golgi membrane [GO:0000139]	1	1
Golgi stack [GO:0005795]	1	1
heterotrimeric G-protein complex [GO:0005834]	2	2
Ino80 complex [GO:0031011]; NuA4 histone acetyltransferase complex [GO:0035267]; R2TP complex [GO:0097255]; Swr1 complex [GO:0000812]	2	1
intermediate filament [GO:0005882]; nuclear envelope [GO:0005635]; nuclear lamina [GO:0005652]	1	1
intracellular membrane-bounded organelle [GO:0043231]	2	2
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]	1	NA
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]	1	1
intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; peroxisome [GO:0005777]	4	7
intracellular membrane-bounded organelle [GO:0043231]; plasma membrane [GO:0005886]	1	1
intracellular non-membrane-bounded organelle [GO:0043232]	1	1
intracellular organelle [GO:0043229]	4	4
intraciliary transport particle A [GO:0030991]; non-motile cilium [GO:0097730]	1	1
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]	1	NA
laminin complex [GO:0043256]	1	NA
late endosome [GO:0005770]; lysosome [GO:0005764]; phagocytic vesicle [GO:0045335]	1	1
lipid droplet [GO:0005811]; membrane [GO:0016020]	2	3
lysosome [GO:0005764]	6	2
lysosome [GO:0005764]; membrane [GO:0016020]	2	1
lysosome [GO:0005764]; vacuole [GO:0005773]	1	NA
membrane [GO:0016020]	44	76
membrane [GO:0016020]; mitochondrial envelope [GO:0005740]	1	1
membrane [GO:0016020]; mitochondrion [GO:0005739]	5	9
membrane [GO:0016020]; nucleolus [GO:0005730]; signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	1
membrane [GO:0016020]; peroxisome [GO:0005777]	3	3
membrane [GO:0016020]; plasma membrane [GO:0005886]	4	6
membrane [GO:0016020]; protein-containing complex [GO:0032991]	1	NA
membrane [GO:0016020]; SAM complex [GO:0001401]	1	1
membrane [GO:0016020]; sarcoplasmic reticulum membrane [GO:0033017]	1	1
membrane [GO:0016020]; spectrin [GO:0008091]	1	1
membrane [GO:0016020]; synapse [GO:0045202]	1	1
membrane [GO:0016020]; trans-Golgi network [GO:0005802]	1	NA
membrane [GO:0016020]; TRC complex [GO:0072380]	1	NA
MICOS complex [GO:0061617]	1	2
MICOS complex [GO:0061617]; mitochondrial crista junction [GO:0044284]	1	1
mitochondrial fatty acid beta-oxidation multienzyme complex [GO:0016507]	1	1
mitochondrial inner membrane [GO:0005743]	8	13
mitochondrial inner membrane [GO:0005743]; mitochondrial matrix [GO:0005759]	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrial membrane [GO:0031966]	1	1
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]	2	2
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]	1	NA
mitochondrial inner membrane [GO:0005743]; respirasome [GO:0070469]	1	2
mitochondrial inner membrane [GO:0005743]; uniplex complex [GO:1990246]	1	1
mitochondrial intermembrane space [GO:0005758]; mitochondrial respiratory chain complex I [GO:0005747]	1	1
mitochondrial intermembrane space [GO:0005758]; respirasome [GO:0070469]	1	1
mitochondrial large ribosomal subunit [GO:0005762]	7	3
mitochondrial matrix [GO:0005759]	7	5
mitochondrial matrix [GO:0005759]; mitochondrion [GO:0005739]	1	1
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]	1	NA
mitochondrial nucleoid [GO:0042645]; nucleoid [GO:0009295]	1	1
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]	1	NA
mitochondrial outer membrane [GO:0005741]	2	3
mitochondrial outer membrane [GO:0005741]; peroxisomal membrane [GO:0005778]	1	1
mitochondrial outer membrane [GO:0005741]; pore complex [GO:0046930]	1	1
mitochondrial outer membrane translocase complex [GO:0005742]	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	1	1
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) [GO:0000275]	2	2
mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	2	2
mitochondrial proton-transporting ATP synthase, catalytic core [GO:0005754]; proton-transporting ATP synthase complex, catalytic core F(1) [GO:0045261]	1	1
mitochondrial proton-transporting ATP synthase, stator stalk [GO:0000274]	1	1
mitochondrial pyruvate dehydrogenase complex [GO:0005967]	1	1
mitochondrial respiratory chain complex I [GO:0005747]	17	22
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) [GO:0005749]	1	1
mitochondrial respiratory chain complex III [GO:0005750]	4	5
mitochondrial respiratory chain complex IV [GO:0005751]	6	6
mitochondrial ribonuclease P complex [GO:0030678]	1	1
mitochondrial ribosome [GO:0005761]	1	NA
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]	1	NA
mitochondrial small ribosomal subunit [GO:0005763]	10	NA
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]	1	NA
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]	1	NA
mitochondrion [GO:0005739]	54	32
mitochondrion [GO:0005739]; oxoglutarate dehydrogenase complex [GO:0045252]	5	5
mitochondrion [GO:0005739]; peroxisome [GO:0005777]	7	2
mitochondrion [GO:0005739]; respiratory chain complex IV [GO:0045277]	1	1
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	5	NA
mitochondrion [GO:0005739]; ribosome [GO:0005840]	2	NA
mitochondrion [GO:0005739]; succinate-CoA ligase complex (ADP-forming) [GO:0009361]	1	1
mitochondrion [GO:0005739]; succinate-CoA ligase complex [GO:0042709]	2	2
mitochondrion [GO:0005739]; tricarboxylic acid cycle enzyme complex [GO:0045239]	1	1
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]	1	NA
myosin filament [GO:0032982]; myosin II complex [GO:0016460]; sarcomere [GO:0030017]	1	1
NatB complex [GO:0031416]	1	NA
neuron projection [GO:0043005]	1	1
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]	1	NA
nuclear outer membrane [GO:0005640]	1	1
nuclear pore outer ring [GO:0031080]	1	NA
nuclear speck [GO:0016607]	2	NA
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]	1	NA
nucleoplasm [GO:0005654]	2	NA
nucleosome [GO:0000786]; nucleus [GO:0005634]	3	3
nucleus [GO:0005634]	21	12
nucleus [GO:0005634]; P-body [GO:0000932]	1	NA
nucleus [GO:0005634]; P granule [GO:0043186]	1	NA
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]	1	NA
nucleus [GO:0005634]; proteasome regulatory particle, base subcomplex [GO:0008540]; proteasome storage granule [GO:0034515]	3	2
nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]	1	1
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]	1	NA
nucleus [GO:0005634]; U2 snRNP [GO:0005686]	1	NA
nucleus [GO:0005634]; ubiquitin ligase complex [GO:0000151]	1	NA
nucleus [GO:0005634]; Z disc [GO:0030018]	1	1
oligosaccharyltransferase complex [GO:0008250]	5	5
P-body [GO:0000932]	1	NA
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]	1	NA
P granule [GO:0043186]	1	NA
peroxisome [GO:0005777]	14	7
phenylalanine-tRNA ligase complex [GO:0009328]	1	NA
phosphopyruvate hydratase complex [GO:0000015]	1	1
plasma membrane [GO:0005886]	19	19
proteasome complex [GO:0000502]	1	NA
proteasome complex [GO:0000502]; proteasome regulatory particle [GO:0005838]	1	1
proteasome regulatory particle [GO:0005838]	1	1
proteasome regulatory particle, lid subcomplex [GO:0008541]	3	1
proton-transporting two-sector ATPase complex, catalytic domain [GO:0033178]	1	1
proton-transporting V-type ATPase complex [GO:0033176]	1	1
proton-transporting V-type ATPase, V1 domain [GO:0033180]	1	1
Rab-protein geranylgeranyltransferase complex [GO:0005968]	1	NA
Ragulator complex [GO:0071986]	1	1
ribonucleoprotein complex [GO:1990904]	3	2
ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]	7	5
RNA polymerase I complex [GO:0005736]; RNA polymerase II, core complex [GO:0005665]; RNA polymerase III complex [GO:0005666]	2	1
sarcoplasmic reticulum membrane [GO:0033017]	1	1
SCF ubiquitin ligase complex [GO:0019005]	1	1
Sec61 translocon complex [GO:0005784]	1	1
signal peptidase complex [GO:0005787]	1	2
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]	1	NA
SNARE complex [GO:0031201]	1	2
sodium:potassium-exchanging ATPase complex [GO:0005890]	2	4
spliceosomal complex [GO:0005681]	1	NA
synapse [GO:0045202]	1	NA
TIM23 mitochondrial import inner membrane translocase complex [GO:0005744]	1	2
translation release factor complex [GO:0018444]	1	NA
tRNA-splicing ligase complex [GO:0072669]	2	NA
troponin complex [GO:0005861]	5	5
U1 snRNP [GO:0005685]	1	NA
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]	1	NA
vacuolar proton-transporting V-type ATPase complex [GO:0016471]	2	1
vacuolar proton-transporting V-type ATPase, V1 domain [GO:0000221]	3	3
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]	1	NA
anchoring junction [GO:0070161]; membrane [GO:0016020]	NA	1
ATP-binding cassette (ABC) transporter complex [GO:0043190]	NA	1
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]	NA	1
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]	NA	1
cell surface [GO:0009986]; plasma membrane [GO:0005886]; postsynaptic membrane [GO:0045211]; presynapse [GO:0098793]; synapse [GO:0045202]	NA	1
chromatin [GO:0000785]; membrane [GO:0016020]; nucleoplasm [GO:0005654]	NA	1
collagen-containing extracellular matrix [GO:0062023]; extracellular space [GO:0005615]	NA	1
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]	NA	1
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]; microtubule [GO:0005874]	NA	1
cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]	NA	1
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]	NA	1
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]	NA	1
cytoplasm [GO:0005737]; lysosome [GO:0005764]; plasma membrane [GO:0005886]	NA	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]	NA	1
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]; mitotic spindle pole [GO:0097431]; spindle microtubule [GO:0005876]	NA	1
cytoplasm [GO:0005737]; SAM complex [GO:0001401]	NA	1
cytoplasmic side of endoplasmic reticulum membrane [GO:0098554]; lumenal side of endoplasmic reticulum membrane [GO:0098553]	NA	1
cytoplasmic side of plasma membrane [GO:0009898]; ESCRT III complex [GO:0000815]; multivesicular body [GO:0005771]	NA	1
cytoplasmic vesicle [GO:0031410]; flotillin complex [GO:0016600]; plasma membrane [GO:0005886]	NA	2
cytoplasmic vesicle membrane [GO:0030659]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]	NA	1
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]	NA	1
cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]	NA	1
cytosol [GO:0005829]; lipid droplet [GO:0005811]	NA	1
cytosol [GO:0005829]; nuclear envelope [GO:0005635]	NA	1
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]	NA	1
EMC complex [GO:0072546]	NA	2
endomembrane system [GO:0012505]; endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]	NA	1
endomembrane system [GO:0012505]; membrane [GO:0016020]; mitochondrion [GO:0005739]; trans-Golgi network [GO:0005802]; vesicle [GO:0031982]	NA	1
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]; peroxisome [GO:0005777]	NA	1
endoplasmic reticulum [GO:0005783]; peroxisome [GO:0005777]	NA	1
endoplasmic reticulum [GO:0005783]; plasma membrane [GO:0005886]	NA	1
endoplasmic reticulum [GO:0005783]; rough endoplasmic reticulum membrane [GO:0030867]	NA	1
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]	NA	2
extracellular matrix [GO:0031012]	NA	13
extracellular space [GO:0005615]; lysosome [GO:0005764]; membrane [GO:0016020]	NA	1
extrinsic component of mitochondrial inner membrane [GO:0031314]	NA	1
gap junction [GO:0005921]; plasma membrane [GO:0005886]	NA	1
Golgi apparatus [GO:0005794]; membrane [GO:0016020]	NA	1
Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]	NA	1
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; phagocytic vesicle membrane [GO:0030670]; plasma membrane [GO:0005886]	NA	1
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; plasma membrane [GO:0005886]	NA	1
m-AAA complex [GO:0005745]	NA	1
mediator complex [GO:0016592]; mitochondrion [GO:0005739]	NA	1
membrane [GO:0016020]; peroxisomal membrane [GO:0005778]	NA	1
membrane [GO:0016020]; Sec61 translocon complex [GO:0005784]	NA	1
microtubule [GO:0005874]	NA	1
mitochondrial inner membrane [GO:0005743]; nucleus [GO:0005634]	NA	1
mitochondrial inner membrane [GO:0005743]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]	NA	1
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]	NA	1
mitochondrial membrane [GO:0031966]	NA	1
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]	NA	1
mitochondrial respirasome [GO:0005746]; mitochondrial respiratory chain complex IV [GO:0005751]	NA	1
PAM complex, Tim23 associated import motor [GO:0001405]	NA	1
plasma membrane [GO:0005886]; striated muscle dense body [GO:0055120]	NA	1
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]	NA	1
plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]	NA	1
ribosome [GO:0005840]	NA	1
Sec62/Sec63 complex [GO:0031207]	NA	1
signal recognition particle receptor complex [GO:0005785]	NA	1
synaptic vesicle membrane [GO:0030672]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
actin filament [GO:0005884]; cytoplasm [GO:0005737]; myofibril [GO:0030016]
adherens junction [GO:0005912]; basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; postsynaptic density [GO:0014069]
adherens junction [GO:0005912]; filamentous actin [GO:0031941]; stress fiber [GO:0001725]; Z disc [GO:0030018]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytoplasm [GO:0005737]; nucleus [GO:0005634]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]
aminoacyl-tRNA synthetase multienzyme complex [GO:0017101]; cytosol [GO:0005829]; mitochondrion [GO:0005739]
Arp2/3 protein complex [GO:0005885]
Arp2/3 protein complex [GO:0005885]; nucleus [GO:0005634]
autophagosome [GO:0005776]; autophagosome membrane [GO:0000421]; cytosol [GO:0005829]
axon [GO:0030424]; cytoplasm [GO:0005737]; dendrite [GO:0030425]; neuronal cell body [GO:0043025]; non-motile cilium [GO:0097730]; nucleus [GO:0005634]; plasma membrane [GO:0005886]; ruffle [GO:0001726]
axon cytoplasm [GO:1904115]; lysosomal membrane [GO:0005765]
axoneme [GO:0005930]
basal cortex [GO:0045180]; cytoplasmic microtubule [GO:0005881]; Golgi apparatus [GO:0005794]; kinetochore [GO:0000776]; microtubule organizing center [GO:0005815]; mitotic spindle [GO:0072686]; spindle microtubule [GO:0005876]
basolateral plasma membrane [GO:0016323]; cell junction [GO:0030054]; neuromuscular junction [GO:0031594]; neuron projection [GO:0043005]; postsynaptic density membrane [GO:0098839]
basolateral plasma membrane [GO:0016323]; endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]
calcineurin complex [GO:0005955]
cAMP-dependent protein kinase complex [GO:0005952]
catalytic step 2 spliceosome [GO:0071013]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; cytosol [GO:0005829]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; commitment complex [GO:0000243]; pICln-Sm protein complex [GO:0034715]; precatalytic spliceosome [GO:0071011]; SMN-Sm protein complex [GO:0034719]; spliceosomal tri-snRNP complex [GO:0097526]; U1 snRNP [GO:0005685]; U12-type spliceosomal complex [GO:0005689]; U2 snRNP [GO:0005686]; U4 snRNP [GO:0005687]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; cytoplasm [GO:0005737]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U2-type prespliceosome [GO:0071004]; U4 snRNP [GO:0005687]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; cytosol [GO:0005829]; precatalytic spliceosome [GO:0071011]; U1 snRNP [GO:0005685]; U2 snRNP [GO:0005686]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U5 snRNP [GO:0005682]
catalytic step 2 spliceosome [GO:0071013]; exon-exon junction complex [GO:0035145]
catalytic step 2 spliceosome [GO:0071013]; Lsm1-7-Pat1 complex [GO:1990726]; P-body [GO:0000932]; precatalytic spliceosome [GO:0071011]; U4/U6 x U5 tri-snRNP complex [GO:0046540]; U6 snRNP [GO:0005688]
catalytic step 2 spliceosome [GO:0071013]; nucleolus [GO:0005730]
catalytic step 2 spliceosome [GO:0071013]; U5 snRNP [GO:0005682]
catenin complex [GO:0016342]
CCR4-NOT core complex [GO:0030015]; nucleus [GO:0005634]; P-body [GO:0000932]
cell division site [GO:0032153]; microtubule cytoskeleton [GO:0015630]; septin complex [GO:0031105]; septin ring [GO:0005940]
cell projection [GO:0042995]; cell surface [GO:0009986]; Golgi membrane [GO:0000139]; postsynaptic membrane [GO:0045211]
chromatin [GO:0000785]; nucleus [GO:0005634]
cis-Golgi network [GO:0005801]; endoplasmic reticulum [GO:0005783]; endoplasmic reticulum membrane [GO:0005789]
clathrin adaptor complex [GO:0030131]; clathrin-coated vesicle [GO:0030136]; cytoplasmic vesicle [GO:0031410]
clathrin vesicle coat [GO:0030125]
clathrin vesicle coat [GO:0030125]; endosome [GO:0005768]; plasma membrane [GO:0005886]
COP9 signalosome [GO:0008180]; cytoplasm [GO:0005737]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum exit site [GO:0070971]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; endoplasmic reticulum membrane [GO:0005789]
COPII vesicle coat [GO:0030127]; lysosome [GO:0005764]; nuclear pore outer ring [GO:0031080]
cortical actin cytoskeleton [GO:0030864]; dendrite [GO:0030425]; lamellipodium [GO:0030027]; postsynaptic density [GO:0014069]; postsynaptic membrane [GO:0045211]; site of polarized growth [GO:0030427]
Cul3-RING ubiquitin ligase complex [GO:0031463]; cytoplasm [GO:0005737]
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; dendrite [GO:0030425]; postsynaptic membrane [GO:0045211]; postsynaptic specialization [GO:0099572]; postsynaptic specialization membrane [GO:0099634]
cytoplasm [GO:0005737]; endosome [GO:0005768]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; exon-exon junction complex [GO:0035145]; nuclear speck [GO:0016607]
cytoplasm [GO:0005737]; Golgi apparatus [GO:0005794]
cytoplasm [GO:0005737]; microtubule [GO:0005874]; microtubule associated complex [GO:0005875]; microtubule organizing center [GO:0005815]
cytoplasm [GO:0005737]; mitochondrial matrix [GO:0005759]
cytoplasm [GO:0005737]; mitochondrion [GO:0005739]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; mRNA cleavage factor complex [GO:0005849]
cytoplasm [GO:0005737]; neuron projection [GO:0043005]
cytoplasm [GO:0005737]; nuclear pore [GO:0005643]
cytoplasm [GO:0005737]; nuclear pore central transport channel [GO:0044613]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; nucleoplasm [GO:0005654]; proteasome activator complex [GO:0008537]
cytoplasm [GO:0005737]; nucleus [GO:0005634]; protein phosphatase type 2A complex [GO:0000159]
cytoplasm [GO:0005737]; prefoldin complex [GO:0016272]
cytoplasm [GO:0005737]; Prp19 complex [GO:0000974]; U2-type catalytic step 1 spliceosome [GO:0071006]
cytoplasm [GO:0005737]; Rab-protein geranylgeranyltransferase complex [GO:0005968]
cytoplasm [GO:0005737]; SUMO activating enzyme complex [GO:0031510]
cytoplasmic stress granule [GO:0010494]; cytosol [GO:0005829]
cytoplasmic stress granule [GO:0010494]; P-body [GO:0000932]
cytoplasmic vesicle [GO:0031410]; plasma membrane [GO:0005886]
cytoskeleton [GO:0005856]; membrane [GO:0016020]
cytosol [GO:0005829]; EKC/KEOPS complex [GO:0000408]; nucleus [GO:0005634]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]; retromer complex [GO:0030904]
cytosol [GO:0005829]; endosome [GO:0005768]; retromer complex [GO:0030904]
cytosol [GO:0005829]; Golgi stack [GO:0005795]; nucleus [GO:0005634]
cytosol [GO:0005829]; intracellular membrane-bounded organelle [GO:0043231]; membrane [GO:0016020]; perinuclear endoplasmic reticulum [GO:0097038]; plasma membrane [GO:0005886]
cytosol [GO:0005829]; late endosome [GO:0005770]; retromer complex [GO:0030904]; retromer, cargo-selective complex [GO:0030906]
cytosol [GO:0005829]; methylosome [GO:0034709]; pICln-Sm protein complex [GO:0034715]; plasma membrane [GO:0005886]; spliceosomal complex [GO:0005681]
cytosol [GO:0005829]; mitochondrion [GO:0005739]; nucleus [GO:0005634]
cytosol [GO:0005829]; nucleus [GO:0005634]; perinuclear region of cytoplasm [GO:0048471]
cytosol [GO:0005829]; nucleus [GO:0005634]; proteasome regulatory particle, lid subcomplex [GO:0008541]
cytosol [GO:0005829]; protein phosphatase type 2A complex [GO:0000159]
dendrite cytoplasm [GO:0032839]; kinesin complex [GO:0005871]; microtubule [GO:0005874]
DNA replication factor A complex [GO:0005662]
early endosome [GO:0005769]; endomembrane system [GO:0012505]; membrane [GO:0016020]
EKC/KEOPS complex [GO:0000408]
elongator holoenzyme complex [GO:0033588]
elongin complex [GO:0070449]
endomembrane system [GO:0012505]; Golgi apparatus [GO:0005794]
endomembrane system [GO:0012505]; membrane [GO:0016020]; SNARE complex [GO:0031201]; synaptic vesicle [GO:0008021]
endopeptidase Clp complex [GO:0009368]
endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]
endoplasmic reticulum [GO:0005783]; endoplasmic reticulum-Golgi intermediate compartment [GO:0005793]; Golgi apparatus [GO:0005794]
endoplasmic reticulum [GO:0005783]; extracellular space [GO:0005615]
endoplasmic reticulum [GO:0005783]; Golgi apparatus [GO:0005794]; TRAPP complex [GO:0030008]
endoplasmic reticulum membrane [GO:0005789]; external side of plasma membrane [GO:0009897]
endosome membrane [GO:0010008]; plasma membrane [GO:0005886]
ESCRT I complex [GO:0000813]
eukaryotic 43S preinitiation complex [GO:0016282]; eukaryotic 48S preinitiation complex [GO:0033290]; eukaryotic translation initiation factor 3 complex [GO:0005852]; polysomal ribosome [GO:0042788]
eukaryotic translation elongation factor 1 complex [GO:0005853]
eukaryotic translation initiation factor 2B complex [GO:0005851]
eukaryotic translation initiation factor 4F complex [GO:0016281]
extracellular matrix [GO:0031012]; extracellular space [GO:0005615]; membrane [GO:0016020]
extracellular region [GO:0005576]; membrane [GO:0016020]
extracellular space [GO:0005615]; Golgi membrane [GO:0000139]
extracellular space [GO:0005615]; plasma membrane [GO:0005886]
GET complex [GO:0043529]
GMP reductase complex [GO:1902560]
Golgi apparatus [GO:0005794]
intracellular membrane-bounded organelle [GO:0043231]; lysosome [GO:0005764]
L-cysteine desulfurase complex [GO:1990221]; mitochondrion [GO:0005739]
laminin complex [GO:0043256]
lysosome [GO:0005764]; vacuole [GO:0005773]
membrane [GO:0016020]; protein-containing complex [GO:0032991]
membrane [GO:0016020]; trans-Golgi network [GO:0005802]
membrane [GO:0016020]; TRC complex [GO:0072380]
mitochondrial inner membrane [GO:0005743]; mitochondrion [GO:0005739]; ribosome [GO:0005840]
mitochondrial matrix [GO:0005759]; ribonucleoprotein granule [GO:0035770]
mitochondrial nucleoid [GO:0042645]; nucleus [GO:0005634]
mitochondrial ribosome [GO:0005761]
mitochondrial ribosome [GO:0005761]; ribonucleoprotein complex [GO:1990904]
mitochondrial small ribosomal subunit [GO:0005763]
mitochondrial small ribosomal subunit [GO:0005763]; mitochondrion [GO:0005739]
mitochondrial small ribosomal subunit [GO:0005763]; small ribosomal subunit [GO:0015935]
mitochondrion [GO:0005739]; ribonucleoprotein complex [GO:1990904]; ribosome [GO:0005840]
mitochondrion [GO:0005739]; ribosome [GO:0005840]
mRNA cleavage and polyadenylation specificity factor complex [GO:0005847]
NatB complex [GO:0031416]
NuA4 histone acetyltransferase complex [GO:0035267]; SWI/SNF complex [GO:0016514]
nuclear pore outer ring [GO:0031080]
nuclear speck [GO:0016607]
nucleolus [GO:0005730]; ribonucleoprotein complex [GO:1990904]
nucleoplasm [GO:0005654]
nucleus [GO:0005634]; P-body [GO:0000932]
nucleus [GO:0005634]; P granule [GO:0043186]
nucleus [GO:0005634]; proteasome core complex [GO:0005839]; proteasome core complex, beta-subunit complex [GO:0019774]
nucleus [GO:0005634]; ribonucleoprotein complex [GO:1990904]
nucleus [GO:0005634]; U2 snRNP [GO:0005686]
nucleus [GO:0005634]; ubiquitin ligase complex [GO:0000151]
P-body [GO:0000932]
P-body [GO:0000932]; RNA polymerase II, core complex [GO:0005665]
P granule [GO:0043186]
phenylalanine-tRNA ligase complex [GO:0009328]
proteasome complex [GO:0000502]
Rab-protein geranylgeranyltransferase complex [GO:0005968]
signal recognition particle, endoplasmic reticulum targeting [GO:0005786]
spliceosomal complex [GO:0005681]
synapse [GO:0045202]
translation release factor complex [GO:0018444]
tRNA-splicing ligase complex [GO:0072669]
U1 snRNP [GO:0005685]
U1 snRNP [GO:0005685]; U2-type prespliceosome [GO:0071004]
VCP-NPL4-UFD1 AAA ATPase complex [GO:0034098]

kable(BP[is.na(BP[,2])==TRUE,1])

x
anchoring junction [GO:0070161]; membrane [GO:0016020]
ATP-binding cassette (ABC) transporter complex [GO:0043190]
axonemal microtubule [GO:0005879]; centriole [GO:0005814]; ciliary basal body [GO:0036064]; cytoskeleton [GO:0005856]; sperm flagellum [GO:0036126]
cell periphery [GO:0071944]; focal adhesion [GO:0005925]; membrane [GO:0016020]
cell surface [GO:0009986]; plasma membrane [GO:0005886]; postsynaptic membrane [GO:0045211]; presynapse [GO:0098793]; synapse [GO:0045202]
chromatin [GO:0000785]; membrane [GO:0016020]; nucleoplasm [GO:0005654]
collagen-containing extracellular matrix [GO:0062023]; extracellular space [GO:0005615]
COPII-coated ER to Golgi transport vesicle [GO:0030134]; endoplasmic reticulum membrane [GO:0005789]; Golgi membrane [GO:0000139]
cytoplasm [GO:0005737]; cytoplasmic dynein complex [GO:0005868]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; cytosol [GO:0005829]; membrane [GO:0016020]
cytoplasm [GO:0005737]; cytosolic small ribosomal subunit [GO:0022627]; nucleus [GO:0005634]
cytoplasm [GO:0005737]; dynein complex [GO:0030286]; microtubule [GO:0005874]
cytoplasm [GO:0005737]; lysosome [GO:0005764]; plasma membrane [GO:0005886]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]
cytoplasm [GO:0005737]; membrane [GO:0016020]; mitochondrion [GO:0005739]; mitotic spindle pole [GO:0097431]; spindle microtubule [GO:0005876]
cytoplasm [GO:0005737]; SAM complex [GO:0001401]
cytoplasmic side of endoplasmic reticulum membrane [GO:0098554]; lumenal side of endoplasmic reticulum membrane [GO:0098553]
cytoplasmic side of plasma membrane [GO:0009898]; ESCRT III complex [GO:0000815]; multivesicular body [GO:0005771]
cytoplasmic vesicle [GO:0031410]; flotillin complex [GO:0016600]; plasma membrane [GO:0005886]
cytoplasmic vesicle membrane [GO:0030659]; Golgi apparatus [GO:0005794]; Golgi membrane [GO:0000139]
cytosol [GO:0005829]; endosome [GO:0005768]; endosome membrane [GO:0010008]
cytosol [GO:0005829]; focal adhesion [GO:0005925]; plasma membrane [GO:0005886]
cytosol [GO:0005829]; lipid droplet [GO:0005811]
cytosol [GO:0005829]; nuclear envelope [GO:0005635]
early endosome membrane [GO:0031901]; extracellular region [GO:0005576]; Golgi membrane [GO:0000139]; lysosomal membrane [GO:0005765]; melanosome membrane [GO:0033162]; membrane [GO:0016020]; mitochondrial outer membrane [GO:0005741]; multivesicular body membrane [GO:0032585]; vacuolar membrane [GO:0005774]
EMC complex [GO:0072546]
endomembrane system [GO:0012505]; endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]
endomembrane system [GO:0012505]; membrane [GO:0016020]; mitochondrion [GO:0005739]; trans-Golgi network [GO:0005802]; vesicle [GO:0031982]
endoplasmic reticulum [GO:0005783]; membrane [GO:0016020]; peroxisome [GO:0005777]
endoplasmic reticulum [GO:0005783]; peroxisome [GO:0005777]
endoplasmic reticulum [GO:0005783]; plasma membrane [GO:0005886]
endoplasmic reticulum [GO:0005783]; rough endoplasmic reticulum membrane [GO:0030867]
external side of plasma membrane [GO:0009897]; integrin complex [GO:0008305]
extracellular matrix [GO:0031012]
extracellular space [GO:0005615]; lysosome [GO:0005764]; membrane [GO:0016020]
extrinsic component of mitochondrial inner membrane [GO:0031314]
gap junction [GO:0005921]; plasma membrane [GO:0005886]
Golgi apparatus [GO:0005794]; membrane [GO:0016020]
Golgi apparatus [GO:0005794]; plasma membrane [GO:0005886]
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; phagocytic vesicle membrane [GO:0030670]; plasma membrane [GO:0005886]
late endosome membrane [GO:0031902]; lysosomal membrane [GO:0005765]; plasma membrane [GO:0005886]
m-AAA complex [GO:0005745]
mediator complex [GO:0016592]; mitochondrion [GO:0005739]
membrane [GO:0016020]; peroxisomal membrane [GO:0005778]
membrane [GO:0016020]; Sec61 translocon complex [GO:0005784]
microtubule [GO:0005874]
mitochondrial inner membrane [GO:0005743]; nucleus [GO:0005634]
mitochondrial inner membrane [GO:0005743]; proton-transporting ATP synthase complex, coupling factor F(o) [GO:0045263]
mitochondrial inner membrane [GO:0005743]; respiratory chain complex III [GO:0045275]
mitochondrial membrane [GO:0031966]
mitochondrial proton-transporting ATP synthase complex [GO:0005753]; mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) [GO:0000276]
mitochondrial respirasome [GO:0005746]; mitochondrial respiratory chain complex IV [GO:0005751]
PAM complex, Tim23 associated import motor [GO:0001405]
plasma membrane [GO:0005886]; striated muscle dense body [GO:0055120]
plasma membrane [GO:0005886]; vacuolar proton-transporting V-type ATPase complex [GO:0016471]; vacuolar proton-transporting V-type ATPase, V0 domain [GO:0000220]
plasma membrane proton-transporting V-type ATPase complex [GO:0033181]; proton-transporting V-type ATPase, V0 domain [GO:0033179]
ribosome [GO:0005840]
Sec62/Sec63 complex [GO:0031207]
signal recognition particle receptor complex [GO:0005785]
synaptic vesicle membrane [GO:0030672]

tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_cc <- c(results_comp_cc, tmp/(length(BP[,1])))
name_comp_cc <- c(name_comp_cc,"graph3C-pool+fracD2","graph3C-onlyFracD2","graph3C-onlyPoolD2")

################################# biological process
t_BP <- as.data.frame(table(GO_1$Gene.Ontology..biological.process.))
t_BP_sorted_1 <- arrange(t_BP, desc(Freq))
t_BP <- as.data.frame(table(GO_2$Gene.Ontology..biological.process.))
t_BP_sorted_2 <- arrange(t_BP, desc(Freq))
#t_BP <- as.data.frame(table(GO_3$Gene.Ontology..cellular.component.))
#t_BP_sorted <- arrange(t_BP, desc(Freq))
#t_BP_sorted_3 <- t_BP_sorted[c(1:20),]
BP <- merge(t_BP_sorted_1, t_BP_sorted_2,
            all = TRUE,
            by = "Var1")
#BP <- merge(BP, t_BP_sorted_3, all = TRUE, by = "Var1")

colnames(BP) <- c("Function", "D2","D2pool")
kable(BP)

Function	D2	D2pool
‘de novo’ AMP biosynthetic process [GO:0044208]; ‘de novo’ IMP biosynthetic process [GO:0006189]	1	1
‘de novo’ AMP biosynthetic process [GO:0044208]; IMP metabolic process [GO:0046040]	1	1
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]	1	NA
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]; GDP-mannose metabolic process [GO:0019673]	1	NA
‘de novo’ IMP biosynthetic process [GO:0006189]; adenine biosynthetic process [GO:0046084]; purine nucleotide biosynthetic process [GO:0006164]	1	1
‘de novo’ IMP biosynthetic process [GO:0006189]; glutamine metabolic process [GO:0006541]	1	1
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; citrulline biosynthetic process [GO:0019240]; glutamine metabolic process [GO:0006541]; nitrogen compound metabolic process [GO:0006807]; UTP biosynthetic process [GO:0006228]	1	NA
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]; UMP biosynthetic process [GO:0006222]	1	NA
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; CDP biosynthetic process [GO:0046705]; phosphorylation [GO:0016310]; UDP biosynthetic process [GO:0006225]	1	1
[2Fe-2S] cluster assembly [GO:0044571]; iron-sulfur cluster assembly [GO:0016226]	1	NA
3’-phosphoadenosine 5’-phosphosulfate biosynthetic process [GO:0050428]; sulfate assimilation [GO:0000103]	1	1
3-keto-sphinganine metabolic process [GO:0006666]; sphingolipid biosynthetic process [GO:0030148]	1	NA
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; phosphorylation [GO:0016310]; purine nucleotide biosynthetic process [GO:0006164]; ribonucleoside monophosphate biosynthetic process [GO:0009156]	1	1
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]	1	NA
acetate metabolic process [GO:0006083]	1	1
acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA biosynthetic process from acetate [GO:0019427]; bioluminescence [GO:0008218]	1	NA
acetyl-CoA biosynthetic process [GO:0006085]; citrate metabolic process [GO:0006101]; fatty acid biosynthetic process [GO:0006633]; tricarboxylic acid cycle [GO:0006099]	1	1
acetyl-CoA biosynthetic process from pyruvate [GO:0006086]	2	2
acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]	1	NA
actin cytoskeleton organization [GO:0030036]	2	2
actin cytoskeleton organization [GO:0030036]; anatomical structure morphogenesis [GO:0009653]; Cdc42 protein signal transduction [GO:0032488]; endocytosis [GO:0006897]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; positive regulation of cellular component organization [GO:0051130]	1	1
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]	1	1
actin cytoskeleton organization [GO:0030036]; barbed-end actin filament capping [GO:0051016]; cell morphogenesis [GO:0000902]; negative regulation of filopodium assembly [GO:0051490]; regulation of lamellipodium assembly [GO:0010591]	1	1
actin cytoskeleton organization [GO:0030036]; muscle structure development [GO:0061061]	2	1
actin filament bundle assembly [GO:0051017]	1	1
actin filament bundle assembly [GO:0051017]; cell migration [GO:0016477]; establishment or maintenance of cell polarity [GO:0007163]	1	NA
actin filament capping [GO:0051693]	1	1
actin filament debranching [GO:0071846]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; regulation of cellular component biogenesis [GO:0044087]	1	NA
actin filament depolymerization [GO:0030042]; barbed-end actin filament capping [GO:0051016]; positive regulation of neuron projection development [GO:0010976]; regulation of lamellipodium assembly [GO:0010591]; sequestering of actin monomers [GO:0042989]	1	NA
actin filament depolymerization [GO:0030042]; locomotion [GO:0040011]; positive regulation of actin filament depolymerization [GO:0030836]; sarcomere organization [GO:0045214]	1	1
actin filament organization [GO:0007015]	1	1
actin filament organization [GO:0007015]; animal organ morphogenesis [GO:0009887]; cell adhesion [GO:0007155]; clathrin coat assembly [GO:0048268]; endocytosis [GO:0006897]; neuron differentiation [GO:0030182]	1	1
actin filament organization [GO:0007015]; cell migration [GO:0016477]; cortical cytoskeleton organization [GO:0030865]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	1	1
actin filament organization [GO:0007015]; cortical cytoskeleton organization [GO:0030865]; engulfment of apoptotic cell [GO:0043652]; establishment or maintenance of cell polarity [GO:0007163]; follicle cell of egg chamber development [GO:0030707]; hemocyte migration [GO:0035099]; melanization defense response [GO:0035006]; motor neuron axon guidance [GO:0008045]; regulation of actin cytoskeleton organization [GO:0032956]; regulation of cell shape [GO:0008360]; small GTPase mediated signal transduction [GO:0007264]	1	1
actin filament organization [GO:0007015]; muscle contraction [GO:0006936]	1	1
actin filament polymerization [GO:0030041]; Arp2/3 complex-mediated actin nucleation [GO:0034314]	2	1
actin filament severing [GO:0051014]; actin polymerization or depolymerization [GO:0008154]; barbed-end actin filament capping [GO:0051016]; lysosomal transport [GO:0007041]	1	1
activation of GTPase activity [GO:0090630]; nucleocytoplasmic transport [GO:0006913]; signal transduction [GO:0007165]	1	NA
actomyosin structure organization [GO:0031032]	1	1
actomyosin structure organization [GO:0031032]; animal organ morphogenesis [GO:0009887]; neuron differentiation [GO:0030182]	1	1
acyl-CoA metabolic process [GO:0006637]	1	NA
adenine salvage [GO:0006168]; AMP salvage [GO:0044209]; purine ribonucleoside salvage [GO:0006166]	1	NA
adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]	1	NA
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]	1	1
adenylate cyclase-modulating G protein-coupled receptor signaling pathway [GO:0007188]; phospholipase C-activating dopamine receptor signaling pathway [GO:0060158]	1	1
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; ATP metabolic process [GO:0046034]; phosphorylation [GO:0016310]	1	1
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; GTP metabolic process [GO:0046039]; ITP metabolic process [GO:0046041]; nucleoside triphosphate biosynthetic process [GO:0009142]; phosphorylation [GO:0016310]	1	NA
aerobic respiration [GO:0009060]; electron transport coupled proton transport [GO:0015990]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	1
aerobic respiration [GO:0009060]; mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	1
aerobic respiration [GO:0009060]; respiratory electron transport chain [GO:0022904]; tricarboxylic acid cycle [GO:0006099]	1	1
alanyl-tRNA aminoacylation [GO:0006419]; tRNA modification [GO:0006400]	1	NA
alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA splicing, via spliceosome [GO:0000398]	1	NA
amino acid catabolic process [GO:0009063]; carbohydrate catabolic process [GO:0016052]	1	1
amino acid metabolic process [GO:0006520]	3	2
amino acid metabolic process [GO:0006520]; biosynthetic process [GO:0009058]	1	1
amino acid metabolic process [GO:0006520]; catecholamine metabolic process [GO:0006584]; serotonin biosynthetic process [GO:0042427]	1	NA
amino acid transport [GO:0006865]; carbohydrate metabolic process [GO:0005975]	1	1
ammonia assimilation cycle [GO:0019676]; glutamate biosynthetic process [GO:0006537]; L-glutamate biosynthetic process [GO:0097054]	1	1
AMP biosynthetic process [GO:0006167]; ATP biosynthetic process [GO:0006754]	1	NA
AMP catabolic process [GO:0006196]	1	NA
AMP salvage [GO:0044209]; phosphorylation [GO:0016310]; purine nucleobase metabolic process [GO:0006144]; purine ribonucleoside salvage [GO:0006166]	1	NA
anatomical structure development [GO:0048856]	1	NA
anatomical structure morphogenesis [GO:0009653]; animal organ development [GO:0048513]; cell differentiation [GO:0030154]; cellular component organization [GO:0016043]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]	4	4
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; cell-cell adhesion [GO:0098609]	1	1
anatomical structure morphogenesis [GO:0009653]; cell differentiation [GO:0030154]; protein phosphorylation [GO:0006468]	3	2
androgen metabolic process [GO:0008209]; estrogen metabolic process [GO:0008210]; fatty acid metabolic process [GO:0006631]	1	1
animal organ development [GO:0048513]; cell adhesion [GO:0007155]; integrin-mediated signaling pathway [GO:0007229]; system development [GO:0048731]	1	1
animal organ development [GO:0048513]; cell development [GO:0048468]; cell migration [GO:0016477]; morphogenesis of an epithelium [GO:0002009]; signal transduction [GO:0007165]	1	1
animal organ development [GO:0048513]; cell morphogenesis involved in differentiation [GO:0000904]; cellular component organization [GO:0016043]; system development [GO:0048731]	1	1
animal organ morphogenesis [GO:0009887]; axon guidance [GO:0007411]; regulation of cell adhesion [GO:0030155]; regulation of cell migration [GO:0030334]; regulation of embryonic development [GO:0045995]; tissue development [GO:0009888]	1	1
animal organ morphogenesis [GO:0009887]; basement membrane assembly [GO:0070831]; cell migration [GO:0016477]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]	1	NA
animal organ morphogenesis [GO:0009887]; cell-cell adhesion via plasma-membrane adhesion molecules [GO:0098742]; cellular component organization [GO:0016043]; establishment of planar polarity [GO:0001736]; establishment or maintenance of cell polarity [GO:0007163]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	NA
animal organ morphogenesis [GO:0009887]; cell migration [GO:0016477]; cellular component organization [GO:0016043]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]	1	1
anterograde axonal transport [GO:0008089]; protein transport [GO:0015031]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]	1	NA
anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; axon guidance [GO:0007411]; cytoskeleton-dependent intracellular transport [GO:0030705]; microtubule-based movement [GO:0007018]; synaptic vesicle transport [GO:0048489]	1	NA
apoptotic mitochondrial changes [GO:0008637]; mitochondrial unfolded protein response [GO:0034514]; protein folding [GO:0006457]; protein import into mitochondrial intermembrane space [GO:0045041]; protein refolding [GO:0042026]	1	1
apoptotic process [GO:0006915]	1	1
apoptotic process [GO:0006915]; cell differentiation [GO:0030154]	1	1
arginine catabolic process to glutamate [GO:0019544]; arginine catabolic process to proline via ornithine [GO:0010121]; L-proline biosynthetic process [GO:0055129]	1	1
arginyl-tRNA aminoacylation [GO:0006420]	1	NA
aromatic compound catabolic process [GO:0019439]; epoxide metabolic process [GO:0097176]	3	2
Arp2/3 complex-mediated actin nucleation [GO:0034314]	2	NA
Arp2/3 complex-mediated actin nucleation [GO:0034314]; cell migration [GO:0016477]; regulation of actin filament polymerization [GO:0030833]	1	NA
Arp2/3 complex-mediated actin nucleation [GO:0034314]; regulation of actin filament polymerization [GO:0030833]	1	NA
asparagine biosynthetic process [GO:0006529]; glutamine metabolic process [GO:0006541]; L-asparagine biosynthetic process [GO:0070981]	1	NA
asparagine catabolic process via L-aspartate [GO:0033345]	1	1
asparagine metabolic process [GO:0006528]; glutamine metabolic process [GO:0006541]; oxaloacetate metabolic process [GO:0006107]	1	1
aspartate catabolic process [GO:0006533]; biosynthetic process [GO:0009058]	1	1
aspartate transmembrane transport [GO:0015810]; L-glutamate transmembrane transport [GO:0015813]; malate-aspartate shuttle [GO:0043490]	1	1
aspartyl-tRNA aminoacylation [GO:0006422]	1	NA
ATP metabolic process [GO:0046034]; nucleoside diphosphate phosphorylation [GO:0006165]; nucleoside triphosphate biosynthetic process [GO:0009142]	1	1
ATP metabolic process [GO:0046034]; vacuolar acidification [GO:0007035]	1	1
ATP synthesis coupled electron transport [GO:0042773]	2	2
autophagosome assembly [GO:0000045]; autophagy of mitochondrion [GO:0000422]; cellular response to nitrogen starvation [GO:0006995]; macroautophagy [GO:0016236]	1	NA
autophagosome assembly [GO:0000045]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; nuclear membrane reassembly [GO:0031468]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	NA
autophagosome assembly [GO:0000045]; intracellular protein transport [GO:0006886]	1	1
autophagosome maturation [GO:0097352]; ER-associated misfolded protein catabolic process [GO:0071712]; mitotic spindle disassembly [GO:0051228]; retrograde protein transport, ER to cytosol [GO:0030970]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
autophagy [GO:0006914]; response to starvation [GO:0042594]	1	NA
autophagy of mitochondrion [GO:0000422]; mitochondrial fission [GO:0000266]; mitochondrial fragmentation involved in apoptotic process [GO:0043653]; peroxisome fission [GO:0016559]	1	1
axon guidance [GO:0007411]; dendrite self-avoidance [GO:0070593]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	1
axon guidance [GO:0007411]; morphogenesis of an epithelium [GO:0002009]; nerve development [GO:0021675]	1	1
beta-alanine biosynthetic process via 3-ureidopropionate [GO:0033396]	1	1
bicoid mRNA localization [GO:0045450]	1	NA
bioluminescence [GO:0008218]	4	2
bioluminescence [GO:0008218]; fatty-acyl-CoA biosynthetic process [GO:0046949]; long-chain fatty acid metabolic process [GO:0001676]	6	2
bioluminescence [GO:0008218]; fatty acid biosynthetic process [GO:0006633]	1	NA
bioluminescence [GO:0008218]; fatty acid metabolic process [GO:0006631]	1	NA
biosynthetic process [GO:0009058]	2	1
biosynthetic process [GO:0009058]; fatty acid beta-oxidation using acyl-CoA oxidase [GO:0033540]; lipid homeostasis [GO:0055088]	2	2
biosynthetic process [GO:0009058]; L-alanine catabolic process [GO:0042853]	1	1
biosynthetic process [GO:0009058]; L-kynurenine catabolic process [GO:0097053]	1	NA
box C/D snoRNP assembly [GO:0000492]; chromatin remodeling [GO:0006338]; DNA repair [GO:0006281]; histone acetylation [GO:0016573]; regulation of transcription by RNA polymerase II [GO:0006357]	2	1
box H/ACA RNA 3’-end processing [GO:0000495]; mRNA pseudouridine synthesis [GO:1990481]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]	1	1
butanediol biosynthetic process [GO:0034079]	1	1
butyrate catabolic process [GO:0046359]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	2	NA
calcineurin-mediated signaling [GO:0097720]	1	1
calcineurin-mediated signaling [GO:0097720]; protein dephosphorylation [GO:0006470]	1	NA
calcium import into the mitochondrion [GO:0036444]; mitochondrial calcium ion homeostasis [GO:0051560]	1	1
calcium ion transmembrane transport [GO:0070588]; cellular calcium ion homeostasis [GO:0006874]; ion transmembrane transport [GO:0034220]	1	1
cAMP-mediated signaling [GO:0019933]; cell morphogenesis [GO:0000902]; cytoskeleton organization [GO:0007010]; regulation of adenylate cyclase activity [GO:0045761]	1	1
canonical glycolysis [GO:0061621]; fructose 1,6-bisphosphate metabolic process [GO:0030388]; fructose 6-phosphate metabolic process [GO:0006002]	1	1
cap-dependent translational initiation [GO:0002191]; formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	1	1
carbohydrate catabolic process [GO:0016052]; deoxyribonucleotide catabolic process [GO:0009264]; deoxyribose phosphate catabolic process [GO:0046386]	1	NA
carbohydrate metabolic process [GO:0005975]	15	8
carbohydrate metabolic process [GO:0005975]; chitin catabolic process [GO:0006032]	10	7
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; proteolysis [GO:0006508]; tricarboxylic acid cycle [GO:0006099]	1	NA
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
carbohydrate metabolic process [GO:0005975]; G protein-coupled receptor signaling pathway [GO:0007186]; protein phosphorylation [GO:0006468]; regulation of signal transduction [GO:0009966]	1	1
carbohydrate metabolic process [GO:0005975]; ganglioside catabolic process [GO:0006689]; glycosaminoglycan metabolic process [GO:0030203]	2	1
carbohydrate metabolic process [GO:0005975]; GDP-mannose biosynthetic process [GO:0009298]	1	NA
carbohydrate metabolic process [GO:0005975]; glucosamine catabolic process [GO:0006043]; N-acetylglucosamine catabolic process [GO:0006046]; N-acetylneuraminate catabolic process [GO:0019262]	2	2
carbohydrate metabolic process [GO:0005975]; glycerol-3-phosphate catabolic process [GO:0046168]; glycerophospholipid metabolic process [GO:0006650]	1	1
carbohydrate metabolic process [GO:0005975]; glycogen biosynthetic process [GO:0005978]	1	1
carbohydrate metabolic process [GO:0005975]; glycoprotein catabolic process [GO:0006516]	1	NA
carbohydrate metabolic process [GO:0005975]; glycosaminoglycan metabolic process [GO:0030203]; protein deglycosylation [GO:0006517]	2	2
carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]	2	NA
carbohydrate metabolic process [GO:0005975]; N-acetylglucosamine catabolic process [GO:0006046]	1	NA
carbohydrate metabolic process [GO:0005975]; N-glycan processing [GO:0006491]	1	2
carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt, oxidative branch [GO:0009051]	1	NA
carbohydrate metabolic process [GO:0005975]; purine ribonucleoside salvage [GO:0006166]	1	NA
carbohydrate metabolic process [GO:0005975]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	1	1
carbohydrate phosphorylation [GO:0046835]; pentose metabolic process [GO:0019321]	1	NA
carboxylic acid metabolic process [GO:0019752]	1	NA
carboxylic acid metabolic process [GO:0019752]; tricarboxylic acid cycle [GO:0006099]	1	1
carnitine transmembrane transport [GO:1902603]; mitochondrial transport [GO:0006839]	1	1
cell-cell adhesion [GO:0098609]; chemical synaptic transmission [GO:0007268]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]	1	NA
cell-cell adhesion [GO:0098609]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; neurotransmitter receptor transport postsynaptic membrane to endosome [GO:0098968]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]	1	NA
cell-matrix adhesion [GO:0007160]	2	2
cell adhesion [GO:0007155]	2	3
cell adhesion [GO:0007155]; extracellular matrix organization [GO:0030198]	1	1
cell death [GO:0008219]; proteolysis [GO:0006508]	1	NA
cell development [GO:0048468]; cellular component organization [GO:0016043]; morphogenesis of an epithelium [GO:0002009]	1	NA
cell differentiation [GO:0030154]; gamete generation [GO:0007276]	1	NA
cell division [GO:0051301]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]	1	NA
cell division [GO:0051301]; protein localization to microtubule [GO:0035372]; regulation of microtubule polymerization or depolymerization [GO:0031110]; spindle assembly [GO:0051225]	1	1
cell redox homeostasis [GO:0045454]	2	1
cell redox homeostasis [GO:0045454]; cellular response to oxidative stress [GO:0034599]; hydrogen peroxide catabolic process [GO:0042744]	1	1
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]	1	1
cell redox homeostasis [GO:0045454]; leukocyte activation [GO:0045321]; removal of superoxide radicals [GO:0019430]	1	1
cell surface receptor signaling pathway [GO:0007166]; cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]	1	NA
cell volume homeostasis [GO:0006884]; chloride transport [GO:0006821]; mRNA cis splicing, via spliceosome [GO:0045292]; spliceosomal snRNP assembly [GO:0000387]	1	NA
cell wall mannoprotein biosynthetic process [GO:0000032]; GDP-mannose biosynthetic process [GO:0009298]; protein glycosylation [GO:0006486]	1	NA
cellular aldehyde metabolic process [GO:0006081]	2	2
cellular calcium ion homeostasis [GO:0006874]	1	1
cellular calcium ion homeostasis [GO:0006874]; regulation of cytosolic calcium ion concentration [GO:0051480]	1	1
cellular component organization [GO:0016043]	2	2
cellular component organization [GO:0016043]; cellular localization [GO:0051641]	1	1
cellular component organization [GO:0016043]; lipoprotein metabolic process [GO:0042157]	1	NA
cellular copper ion homeostasis [GO:0006878]; mitochondrial cytochrome c oxidase assembly [GO:0033617]	1	1
cellular glucose homeostasis [GO:0001678]; glycolytic process [GO:0006096]; hexose metabolic process [GO:0019318]	1	1
cellular ketone body metabolic process [GO:0046950]; ketone body catabolic process [GO:0046952]	1	1
cellular macromolecule biosynthetic process [GO:0034645]	1	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; proton transmembrane transport [GO:1902600]; sodium ion export across plasma membrane [GO:0036376]	1	1
cellular potassium ion homeostasis [GO:0030007]; cellular sodium ion homeostasis [GO:0006883]; potassium ion import across plasma membrane [GO:1990573]; sodium ion export across plasma membrane [GO:0036376]	2	4
cellular response to amino acid starvation [GO:0034198]; cellular response to glucose starvation [GO:0042149]; negative regulation of TORC1 signaling [GO:1904262]; protein localization to lysosome [GO:0061462]; translation [GO:0006412]	1	1
cellular response to amino acid stimulus [GO:0071230]; positive regulation of TOR signaling [GO:0032008]	1	1
cellular response to cAMP [GO:0071320]; negative regulation of synaptic vesicle exocytosis [GO:2000301]; Rap protein signal transduction [GO:0032486]	1	1
cellular response to DNA damage stimulus [GO:0006974]; peptidyl-glutamate ADP-deribosylation [GO:0140291]; purine nucleoside metabolic process [GO:0042278]	1	NA
cellular response to DNA damage stimulus [GO:0006974]; protein modification by small protein conjugation [GO:0032446]; protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
cellular response to heat [GO:0034605]; protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	1
cellular response to hypoxia [GO:0071456]; negative regulation of hypoxia-induced intrinsic apoptotic signaling pathway [GO:1903298]	1	1
cellular response to insulin stimulus [GO:0032869]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]	1	1
cellular response to oxidative stress [GO:0034599]	2	1
cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]	1	NA
cellular response to unfolded protein [GO:0034620]; chaperone cofactor-dependent protein refolding [GO:0051085]; protein refolding [GO:0042026]; vesicle-mediated transport [GO:0016192]	2	1
CENP-A containing chromatin assembly [GO:0034080]; DNA replication-dependent chromatin assembly [GO:0006335]	1	NA
ceramide biosynthetic process [GO:0046513]; sphingomyelin catabolic process [GO:0006685]	3	NA
chaperone-mediated protein complex assembly [GO:0051131]; protein folding [GO:0006457]	1	NA
chaperone-mediated protein folding [GO:0061077]; protein peptidyl-prolyl isomerization [GO:0000413]	1	1
chaperone cofactor-dependent protein refolding [GO:0051085]	1	1
chloride transport [GO:0006821]	1	1
cholesterol metabolic process [GO:0008203]; endocytosis [GO:0006897]; lipid transport [GO:0006869]	1	1
cholesterol transport [GO:0030301]	1	1
chromatin remodeling [GO:0006338]; histone deacetylation [GO:0016575]; regulation of DNA-templated transcription [GO:0006355]	1	1
chromosome segregation [GO:0007059]; protein maturation by [4Fe-4S] cluster transfer [GO:0106035]	1	NA
cilium assembly [GO:0060271]; endocytic recycling [GO:0032456]; endocytosis [GO:0006897]; endosomal transport [GO:0016197]; protein localization to plasma membrane [GO:0072659]	1	1
citrate metabolic process [GO:0006101]; tricarboxylic acid cycle [GO:0006099]	1	1
clathrin-dependent endocytosis [GO:0072583]; endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	1	1
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]	1	1
clathrin-dependent endocytosis [GO:0072583]; intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	1	1
coenzyme A biosynthetic process [GO:0015937]	1	NA
coenzyme A biosynthetic process [GO:0015937]; phosphorylation [GO:0016310]	1	NA
COPII-coated vesicle budding [GO:0090114]; intracellular protein transport [GO:0006886]	1	NA
COPII-coated vesicle budding [GO:0090114]; mRNA transport [GO:0051028]; positive regulation of TOR signaling [GO:0032008]; protein exit from endoplasmic reticulum [GO:0032527]; protein import into nucleus [GO:0006606]	1	NA
COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum organization [GO:0007029]; intracellular protein transport [GO:0006886]	1	NA
COPII-coated vesicle cargo loading [GO:0090110]; intracellular protein transport [GO:0006886]	1	NA
cristae formation [GO:0042407]	2	3
cysteine biosynthetic process [GO:0019344]; cysteine biosynthetic process from serine [GO:0006535]; cysteine biosynthetic process via cystathionine [GO:0019343]	1	NA
cysteine biosynthetic process via cystathionine [GO:0019343]; transsulfuration [GO:0019346]	1	NA
cytolysis [GO:0019835]; defense response to bacterium [GO:0042742]; metabolic process [GO:0008152]	1	1
cytoplasmic translation [GO:0002181]	6	6
cytoplasmic translation [GO:0002181]; ribosomal large subunit assembly [GO:0000027]	2	2
cytoplasmic translation [GO:0002181]; ribosomal large subunit biogenesis [GO:0042273]	2	2
cytoplasmic translation [GO:0002181]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	1
cytoplasmic translation [GO:0002181]; translational elongation [GO:0006414]	1	1
cytoplasmic translational elongation [GO:0002182]	1	1
cytoplasmic translational initiation [GO:0002183]	1	1
cytoskeleton-dependent cytokinesis [GO:0061640]	1	NA
cytoskeleton organization [GO:0007010]; phosphorylation [GO:0016310]; plasma membrane tubulation [GO:0097320]; regulation of endocytosis [GO:0030100]	1	NA
cytosolic ribosome assembly [GO:0042256]	1	1
D-amino acid catabolic process [GO:0019478]	1	NA
D-gluconate catabolic process [GO:0046177]; pentose-phosphate shunt, oxidative branch [GO:0009051]	1	1
D-ribose metabolic process [GO:0006014]; pentose-phosphate shunt, non-oxidative branch [GO:0009052]	1	1
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of catalytic activity [GO:0043085]	1	NA
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA processing [GO:0006397]	1	NA
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]	1	NA
deoxyribonucleoside triphosphate catabolic process [GO:0009204]; nucleoside triphosphate catabolic process [GO:0009143]; nucleotide metabolic process [GO:0009117]	1	NA
dephosphorylation [GO:0016311]	6	1
dephosphorylation [GO:0016311]; L-serine biosynthetic process [GO:0006564]	1	1
dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]; mRNA polyadenylation [GO:0006378]; termination of RNA polymerase II transcription [GO:0006369]	1	NA
detection of chemical stimulus involved in sensory perception of smell [GO:0050911]	1	NA
dihydrofolate metabolic process [GO:0046452]; folic acid metabolic process [GO:0046655]; glycine biosynthetic process [GO:0006545]; one-carbon metabolic process [GO:0006730]; tetrahydrofolate biosynthetic process [GO:0046654]	1	NA
dimethylallyl diphosphate biosynthetic process [GO:0050992]; isopentenyl diphosphate biosynthetic process [GO:0009240]	1	1
DNA-templated transcription [GO:0006351]	2	1
DNA integration [GO:0015074]; nucleosome assembly [GO:0006334]	1	1
DNA repair [GO:0006281]; mRNA splicing, via spliceosome [GO:0000398]; protein K63-linked ubiquitination [GO:0070534]	1	NA
DNA unwinding involved in DNA replication [GO:0006268]; double-strand break repair via homologous recombination [GO:0000724]; meiotic cell cycle [GO:0051321]; nucleotide-excision repair [GO:0006289]; telomere maintenance via telomerase [GO:0007004]	1	NA
dolichol-linked oligosaccharide biosynthetic process [GO:0006488]; GPI anchor biosynthetic process [GO:0006506]; protein O-linked mannosylation [GO:0035269]	1	1
dopaminergic neuron differentiation [GO:0071542]; neuron projection development [GO:0031175]	1	NA
double-strand break repair via homologous recombination [GO:0000724]	1	NA
dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]	1	NA
electron transport chain [GO:0022900]	1	2
electron transport chain [GO:0022900]; mitochondrial respiratory chain complex I assembly [GO:0032981]	1	1
endocytic recycling [GO:0032456]; Golgi vesicle fusion to target membrane [GO:0048210]; protein localization to plasma membrane [GO:0072659]; protein secretion [GO:0009306]; regulation of exocytosis [GO:0017157]; vesicle docking involved in exocytosis [GO:0006904]	1	1
endocytic recycling [GO:0032456]; vesicle-mediated transport [GO:0016192]	1	NA
endocytosis [GO:0006897]	2	1
endocytosis [GO:0006897]; endosomal transport [GO:0016197]	1	1
endocytosis [GO:0006897]; endosomal transport [GO:0016197]; plasma membrane tubulation [GO:0097320]	1	NA
endocytosis [GO:0006897]; intracellular protein transport [GO:0006886]; regulation of endocytosis [GO:0030100]	1	1
endocytosis [GO:0006897]; post-Golgi vesicle-mediated transport [GO:0006892]	1	1
endocytosis [GO:0006897]; vesicle-mediated transport [GO:0016192]	1	NA
endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000447]; endonucleolytic cleavage to generate mature 3’-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000461]; translation [GO:0006412]	1	1
endoplasmic reticulum-plasma membrane tethering [GO:0061817]; lipid transport [GO:0006869]	2	1
endoplasmic reticulum membrane organization [GO:0090158]; endoplasmic reticulum-plasma membrane tethering [GO:0061817]	1	1
endoplasmic reticulum organization [GO:0007029]; protein homooligomerization [GO:0051260]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]	4	3
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi localization [GO:0051645]; protein transport [GO:0015031]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; Golgi organization [GO:0007030]; intracellular protein transport [GO:0006886]	2	3
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; organelle transport along microtubule [GO:0072384]; protein secretion [GO:0009306]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; intracellular protein transport [GO:0006886]	1	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein retention in ER lumen [GO:0006621]; protein transport [GO:0015031]	1	NA
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]; vesicle fusion with Golgi apparatus [GO:0048280]	1	1
endoplasmic reticulum tubular network organization [GO:0071786]; membrane organization [GO:0061024]	1	1
endosome to lysosome transport [GO:0008333]; phagosome-lysosome fusion [GO:0090385]	1	1
ER-associated misfolded protein catabolic process [GO:0071712]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	NA
error-free translesion synthesis [GO:0070987]	1	NA
establishment of mitotic spindle localization [GO:0040001]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle assembly [GO:0090307]	1	NA
establishment of synaptic specificity at neuromuscular junction [GO:0007529]; gamma-aminobutyric acid receptor clustering [GO:0097112]; glycine receptor clustering [GO:0072579]; Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; molybdenum incorporation into molybdenum-molybdopterin complex [GO:0018315]; molybdopterin cofactor biosynthetic process [GO:0032324]; postsynaptic neurotransmitter receptor diffusion trapping [GO:0098970]	1	NA
exocytosis [GO:0006887]	1	1
exonucleolytic catabolism of deadenylated mRNA [GO:0043928]	1	NA
farnesyl diphosphate biosynthetic process [GO:0045337]; pheromone biosynthetic process [GO:0042811]	1	NA
fatty acid alpha-oxidation [GO:0001561]	2	2
fatty acid beta-oxidation [GO:0006635]	12	9
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]	1	1
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; medium-chain fatty acid catabolic process [GO:0051793]	2	NA
fatty acid biosynthetic process [GO:0006633]	6	2
fatty acid biosynthetic process [GO:0006633]; malonyl-CoA biosynthetic process [GO:2001295]	1	1
fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; sphingolipid biosynthetic process [GO:0030148]; very long-chain fatty acid biosynthetic process [GO:0042761]	1	NA
fatty acid metabolic process [GO:0006631]	3	1
fatty acid transport [GO:0015908]	2	2
FMN biosynthetic process [GO:0009398]; phosphorylation [GO:0016310]; riboflavin biosynthetic process [GO:0009231]; riboflavin metabolic process [GO:0006771]	1	NA
folic acid-containing compound biosynthetic process [GO:0009396]; tetrahydrofolate interconversion [GO:0035999]	1	1
folic acid metabolic process [GO:0046655]; glycine biosynthetic process from serine [GO:0019264]; L-serine catabolic process [GO:0006565]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; purine nucleobase biosynthetic process [GO:0009113]; tetrahydrofolate interconversion [GO:0035999]; tetrahydrofolate metabolic process [GO:0046653]	1	1
formaldehyde catabolic process [GO:0046294]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; formation of translation preinitiation complex [GO:0001731]	1	NA
formation of cytoplasmic translation initiation complex [GO:0001732]; regulation of translational initiation [GO:0006446]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]; translation reinitiation [GO:0002188]	1	1
formation of cytoplasmic translation initiation complex [GO:0001732]; translational initiation [GO:0006413]	4	4
formation of translation preinitiation complex [GO:0001731]	1	NA
fructose 1,6-bisphosphate metabolic process [GO:0030388]; glycolytic process [GO:0006096]	1	1
fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]	1	NA
fucose metabolic process [GO:0006004]; glycoside catabolic process [GO:0016139]	3	1
fumarate metabolic process [GO:0006106]; malate metabolic process [GO:0006108]; tricarboxylic acid cycle [GO:0006099]	1	1
G protein-coupled receptor signaling pathway [GO:0007186]	1	1
G1/S transition of mitotic cell cycle [GO:0000082]; hippo signaling [GO:0035329]; intracellular signal transduction [GO:0035556]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of apoptotic process [GO:0043065]; regulation of organ growth [GO:0046620]	1	1
galactose catabolic process via UDP-galactose [GO:0033499]; glucose metabolic process [GO:0006006]	1	NA
galactose metabolic process [GO:0006012]	4	3
gamma-aminobutyric acid biosynthetic process [GO:0009449]	1	NA
gamma-aminobutyric acid catabolic process [GO:0009450]; neurotransmitter catabolic process [GO:0042135]	1	1
GDP-mannose biosynthetic process [GO:0009298]; mannose metabolic process [GO:0006013]; protein N-linked glycosylation [GO:0006487]	1	NA
gluconeogenesis [GO:0006094]	1	NA
gluconeogenesis [GO:0006094]; glucose 6-phosphate metabolic process [GO:0051156]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glyceraldehyde-3-phosphate biosynthetic process [GO:0046166]; glycerol catabolic process [GO:0019563]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; glycolytic process [GO:0006096]	1	1
gluconeogenesis [GO:0006094]; pyruvate metabolic process [GO:0006090]	1	1
glucose metabolic process [GO:0006006]; glycolytic process [GO:0006096]	1	1
glucose metabolic process [GO:0006006]; pentose-phosphate shunt [GO:0006098]	1	1
glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]	2	NA
glucuronoside catabolic process [GO:0019391]	1	NA
glutamate catabolic process [GO:0006538]	1	1
glutamine metabolic process [GO:0006541]; GMP biosynthetic process [GO:0006177]	1	1
glutamine metabolic process [GO:0006541]; UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	1	1
glutamyl-tRNA aminoacylation [GO:0006424]	1	1
glutathione biosynthetic process [GO:0006750]	1	1
glutathione biosynthetic process [GO:0006750]; positive regulation of glutamate-cysteine ligase activity [GO:0035229]	1	NA
glutathione catabolic process [GO:0006751]	1	2
glutathione metabolic process [GO:0006749]	13	9
glutathione metabolic process [GO:0006749]; hydrogen sulfide metabolic process [GO:0070813]; RNA 3’-end processing [GO:0031123]	1	1
glutathione metabolic process [GO:0006749]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	1
glycerol-3-phosphate metabolic process [GO:0006072]	1	1
glycerol metabolic process [GO:0006071]; phosphorylation [GO:0016310]	1	NA
glycine biosynthetic process, by transamination of glyoxylate [GO:0019265]	2	NA
glycine decarboxylation via glycine cleavage system [GO:0019464]	2	2
glycine decarboxylation via glycine cleavage system [GO:0019464]; protein lipoylation [GO:0009249]	1	1
glycogen biosynthetic process [GO:0005978]	1	1
glycogen biosynthetic process [GO:0005978]; glycogen metabolic process [GO:0005977]; UDP-glucose metabolic process [GO:0006011]	1	1
glycogen catabolic process [GO:0005980]	2	1
glycolate biosynthetic process [GO:0046295]; glyoxal metabolic process [GO:1903189]; negative regulation of neuron death [GO:1901215]; response to oxidative stress [GO:0006979]	1	NA
glycolipid biosynthetic process [GO:0009247]	1	1
glycolytic process [GO:0006096]	3	3
glycosaminoglycan biosynthetic process [GO:0006024]	1	NA
glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]	1	NA
glycoside catabolic process [GO:0016139]; lipid metabolic process [GO:0006629]; oligosaccharide metabolic process [GO:0009311]	3	1
glycyl-tRNA aminoacylation [GO:0006426]	1	NA
glyoxylate cycle [GO:0006097]; isocitrate metabolic process [GO:0006102]; NADP metabolic process [GO:0006739]; tricarboxylic acid cycle [GO:0006099]	2	2
glyoxylate metabolic process [GO:0046487]	1	1
GMP biosynthetic process [GO:0006177]; GTP biosynthetic process [GO:0006183]	1	1
Golgi organization [GO:0007030]; protein secretion [GO:0009306]	1	NA
Golgi to endosome transport [GO:0006895]; intracellular protein transport [GO:0006886]; phagolysosome assembly involved in apoptotic cell clearance [GO:0090387]	1	1
Golgi to plasma membrane protein transport [GO:0043001]; intra-Golgi vesicle-mediated transport [GO:0006891]; SNARE complex disassembly [GO:0035494]	1	1
guanine catabolic process [GO:0006147]; guanine metabolic process [GO:0046098]	1	NA
heme biosynthetic process [GO:0006783]	1	NA
heme biosynthetic process [GO:0006783]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
heme biosynthetic process [GO:0006783]; protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
heterochromatin formation [GO:0031507]; nuclear envelope organization [GO:0006998]; nuclear migration [GO:0007097]; nuclear pore localization [GO:0051664]; protein localization to nuclear envelope [GO:0090435]	1	1
histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]	1	NA
histone H4 acetylation [GO:0043967]; nervous system development [GO:0007399]; regulation of transcription by RNA polymerase II [GO:0006357]	1	NA
homocysteine catabolic process [GO:0043418]; proteolysis [GO:0006508]; response to toxic substance [GO:0009636]	1	1
homogentisate catabolic process [GO:1902000]; L-phenylalanine catabolic process [GO:0006559]; tyrosine catabolic process [GO:0006572]	1	1
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]	1	1
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]	1	NA
hydrogen peroxide catabolic process [GO:0042744]; response to hydrogen peroxide [GO:0042542]	1	1
immune response [GO:0006955]	1	NA
immune response [GO:0006955]; proteolysis involved in protein catabolic process [GO:0051603]	1	NA
IMP salvage [GO:0032264]	1	1
innate immune response [GO:0045087]; peptidoglycan catabolic process [GO:0009253]	1	NA
inner mitochondrial membrane organization [GO:0007007]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]	1	NA
inositol biosynthetic process [GO:0006021]; inositol metabolic process [GO:0006020]; inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]; signal transduction [GO:0007165]	2	2
inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654]	1	NA
inositol catabolic process [GO:0019310]	1	1
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of flagellated sperm motility [GO:1902093]	1	NA
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]	1	NA
intermediate filament cytoskeleton organization [GO:0045104]	1	1
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
intra-Golgi vesicle-mediated transport [GO:0006891]; intracellular protein transport [GO:0006886]; retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum [GO:0006890]	1	1
intracellular cholesterol transport [GO:0032367]; sterol transport [GO:0015918]	1	1
intracellular protein transport [GO:0006886]; lipid droplet organization [GO:0034389]	1	NA
intracellular protein transport [GO:0006886]; Rab protein signal transduction [GO:0032482]	1	NA
intracellular protein transport [GO:0006886]; receptor-mediated endocytosis [GO:0006898]	1	1
intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]	3	NA
intracellular protein transport [GO:0006886]; SNARE complex disassembly [GO:0035494]	1	1
intracellular protein transport [GO:0006886]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]	4	1
intracellular protein transport [GO:0006886]; vesicle-mediated transport [GO:0016192]	2	1
intracellular protein transport [GO:0006886]; vesicle docking [GO:0048278]; vesicle fusion [GO:0006906]	1	NA
intracellular sequestering of iron ion [GO:0006880]; iron ion transport [GO:0006826]	1	NA
intracellular signal transduction [GO:0035556]	1	1
intraciliary retrograde transport [GO:0035721]; non-motile cilium assembly [GO:1905515]; protein localization to cilium [GO:0061512]	1	1
iron-sulfur cluster assembly [GO:0016226]	1	NA
iron ion homeostasis [GO:0055072]; iron ion transport [GO:0006826]	1	1
iron ion transport [GO:0006826]	1	1
isocitrate metabolic process [GO:0006102]; tricarboxylic acid cycle [GO:0006099]	2	1
isoleucyl-tRNA aminoacylation [GO:0006428]	1	NA
isoprenoid biosynthetic process [GO:0008299]; pheromone biosynthetic process [GO:0042811]	1	NA
ketone body biosynthetic process [GO:0046951]; leucine catabolic process [GO:0006552]	1	NA
L-ascorbic acid biosynthetic process [GO:0019853]	7	2
L-glutamate transmembrane transport [GO:0015813]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; lysine biosynthetic process via aminoadipic acid [GO:0019878]	1	1
L-lysine catabolic process to acetyl-CoA via saccharopine [GO:0033512]; tricarboxylic acid cycle [GO:0006099]	1	1
L-methionine salvage from methylthioadenosine [GO:0019509]	1	NA
L-methionine salvage from methylthioadenosine [GO:0019509]; L-methionine salvage from S-adenosylmethionine [GO:0019284]	2	1
L-methionine salvage from methylthioadenosine [GO:0019509]; purine ribonucleoside salvage [GO:0006166]	1	NA
L-phenylalanine catabolic process [GO:0006559]; tetrahydrobiopterin biosynthetic process [GO:0006729]	1	1
L-phenylalanine catabolic process [GO:0006559]; tyrosine metabolic process [GO:0006570]	1	NA
L-proline biosynthetic process [GO:0055129]	1	1
leucine catabolic process [GO:0006552]	1	NA
leucyl-tRNA aminoacylation [GO:0006429]	1	1
lipid catabolic process [GO:0016042]	4	4
lipid metabolic process [GO:0006629]	6	4
lipid metabolic process [GO:0006629]; response to reactive oxygen species [GO:0000302]	1	NA
lipid transport [GO:0006869]	1	1
lipid transport [GO:0006869]; positive regulation of intracellular cholesterol transport [GO:0032385]	1	1
lipoate biosynthetic process [GO:0009107]; protein lipoylation [GO:0009249]	1	NA
localization [GO:0051179]; response to external stimulus [GO:0009605]; signal transduction [GO:0007165]	1	NA
locomotion [GO:0040011]; post-embryonic development [GO:0009791]	1	1
long-chain fatty-acyl-CoA metabolic process [GO:0035336]	4	7
lysyl-tRNA aminoacylation [GO:0006430]	1	NA
malate metabolic process [GO:0006108]; NADH metabolic process [GO:0006734]; oxaloacetate metabolic process [GO:0006107]; tricarboxylic acid cycle [GO:0006099]	1	1
malate transmembrane transport [GO:0071423]; oxaloacetate transport [GO:0015729]; phosphate ion transmembrane transport [GO:0035435]; succinate transmembrane transport [GO:0071422]; sulfate transport [GO:0008272]; thiosulfate transport [GO:0015709]	2	2
mannose metabolic process [GO:0006013]	2	1
MAPK cascade [GO:0000165]; protein phosphorylation [GO:0006468]; stress-activated MAPK cascade [GO:0051403]	1	NA
maturation of LSU-rRNA [GO:0000470]; maturation of SSU-rRNA [GO:0030490]; mRNA splicing, via spliceosome [GO:0000398]	1	1
maturation of LSU-rRNA [GO:0000470]; translation [GO:0006412]	1	1
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]	1	1
maturation of SSU-rRNA [GO:0030490]; ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	1	1
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000462]; translation [GO:0006412]	1	1
meiotic cell cycle [GO:0051321]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	1
metabolite repair [GO:0110051]; nicotinamide nucleotide metabolic process [GO:0046496]	1	NA
methionyl-tRNA aminoacylation [GO:0006431]	1	NA
methylation [GO:0032259]	1	1
methylation [GO:0032259]; one-carbon metabolic process [GO:0006730]; protein homotetramerization [GO:0051289]; regulation of gluconeogenesis [GO:0006111]; S-adenosylhomocysteine metabolic process [GO:0046498]; S-adenosylmethionine metabolic process [GO:0046500]; sarcosine metabolic process [GO:1901052]	2	2
methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione [GO:0019243]; RNA 3’-end processing [GO:0031123]	1	1
microtubule-based movement [GO:0007018]	1	2
microtubule cytoskeleton organization [GO:0000226]; mitotic cell cycle [GO:0000278]	2	2
mitochondrial ADP transmembrane transport [GO:0140021]; mitochondrial ATP transmembrane transport [GO:1990544]	1	1
mitochondrial citrate transmembrane transport [GO:0006843]	1	1
mitochondrial DNA replication [GO:0006264]; positive regulation of helicase activity [GO:0051096]	1	1
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]	5	5
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]; mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]; positive regulation of cysteine-type endopeptidase activity involved in apoptotic process [GO:0043280]	1	1
mitochondrial electron transport, NADH to ubiquinone [GO:0006120]	9	10
mitochondrial electron transport, succinate to ubiquinone [GO:0006121]; tricarboxylic acid cycle [GO:0006099]	1	1
mitochondrial electron transport, ubiquinol to cytochrome c [GO:0006122]	4	5
mitochondrial fission [GO:0000266]; mitochondrial fusion [GO:0008053]; protein targeting to mitochondrion [GO:0006626]	1	1
mitochondrial fission [GO:0000266]; rhythmic process [GO:0048511]	1	1
mitochondrial phosphate ion transmembrane transport [GO:1990547]; phosphate ion transmembrane transport [GO:0035435]	1	1
mitochondrial respiratory chain complex assembly [GO:0033108]; protein insertion into mitochondrial outer membrane [GO:0045040]	1	1
mitochondrial respiratory chain complex I assembly [GO:0032981]	1	1
mitochondrial respiratory chain complex I assembly [GO:0032981]; response to oxidative stress [GO:0006979]	1	1
mitochondrial RNA processing [GO:0000963]; regulation of mitochondrial mRNA stability [GO:0044528]	1	NA
mitochondrial translation [GO:0032543]	4	NA
mitochondrial translational elongation [GO:0070125]	1	NA
mitochondrial translational elongation [GO:0070125]; RNA processing [GO:0006396]	1	NA
mitochondrial translational elongation [GO:0070125]; translational elongation [GO:0006414]	1	1
mitochondrial translational termination [GO:0070126]	1	NA
mitochondrial transmembrane transport [GO:1990542]; serine import into mitochondrion [GO:0140300]	2	2
mitochondrial tRNA 3’-end processing [GO:1990180]; tRNA 3’-terminal CCA addition [GO:0001680]; tRNA processing [GO:0008033]	1	NA
mitochondrial tRNA 5’-end processing [GO:0097745]; tRNA 5’-leader removal [GO:0001682]	1	1
mitochondrion organization [GO:0007005]	2	3
mitochondrion organization [GO:0007005]; regulation of mRNA processing [GO:0050684]	1	NA
mitotic cell cycle [GO:0000278]	1	1
mitotic cytokinesis [GO:0000281]	2	3
mitotic spindle organization [GO:0007052]	1	NA
mRNA catabolic process [GO:0006402]; RNA-mediated gene silencing [GO:0031047]	1	1
mRNA export from nucleus [GO:0006406]	1	NA
mRNA export from nucleus [GO:0006406]; mRNA splicing, via spliceosome [GO:0000398]	1	1
mRNA polyadenylation [GO:0006378]; mRNA processing [GO:0006397]	1	NA
mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; RNA splicing [GO:0008380]	1	NA
mRNA splice site selection [GO:0006376]	1	NA
mRNA splicing, via spliceosome [GO:0000398]	4	NA
mRNA splicing, via spliceosome [GO:0000398]; P-body assembly [GO:0033962]	1	NA
mRNA transport [GO:0051028]; nucleocytoplasmic transport [GO:0006913]; protein import into nucleus [GO:0006606]	1	NA
mRNA transport [GO:0051028]; regulation of translation [GO:0006417]	1	NA
multicellular organism reproduction [GO:0032504]	11	8
muscle contraction [GO:0006936]	1	1
muscle contraction [GO:0006936]; sarcomere organization [GO:0045214]	1	1
N-acetylneuraminate catabolic process [GO:0019262]	1	NA
N-terminal peptidyl-glycine N-myristoylation [GO:0018008]	1	NA
N-terminal peptidyl-methionine acetylation [GO:0017196]	2	NA
NADPH regeneration [GO:0006740]	1	1
negative regulation of endopeptidase activity [GO:0010951]; proteolysis [GO:0006508]	1	1
negative regulation of peptidase activity [GO:0010466]	11	6
negative regulation of phosphoprotein phosphatase activity [GO:0032515]	1	NA
negative regulation of translation [GO:0017148]; P-body assembly [GO:0033962]; stress granule assembly [GO:0034063]	1	NA
negative regulation of translation [GO:0017148]; translation [GO:0006412]	1	1
neuron projection development [GO:0031175]; regulation of neuronal synaptic plasticity [GO:0048168]	1	1
neuron projection morphogenesis [GO:0048812]; positive regulation of axon extension [GO:0045773]; positive regulation of dendritic spine morphogenesis [GO:0061003]; postsynaptic actin cytoskeleton organization [GO:0098974]; regulation of actin filament polymerization [GO:0030833]	1	NA
neurotransmitter catabolic process [GO:0042135]	2	1
nitrogen compound metabolic process [GO:0006807]	6	4
NLS-bearing protein import into nucleus [GO:0006607]	1	NA
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; translation [GO:0006412]	1	NA
nuclear-transcribed mRNA catabolic process, exonucleolytic [GO:0000291]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; positive regulation of translational initiation [GO:0045948]; transcription initiation at RNA polymerase II promoter [GO:0006367]	1	NA
nucleobase-containing compound metabolic process [GO:0006139]; organonitrogen compound metabolic process [GO:1901564]	1	NA
nucleocytoplasmic transport [GO:0006913]	1	NA
nucleoside diphosphate catabolic process [GO:0009134]	1	1
nucleoside metabolic process [GO:0009116]	1	NA
nucleoside phosphate metabolic process [GO:0006753]; ribose phosphate metabolic process [GO:0019693]	1	NA
nucleosome assembly [GO:0006334]	3	1
nucleotide metabolic process [GO:0009117]	1	NA
ommochrome biosynthetic process [GO:0006727]; tryptophan catabolic process to acetyl-CoA [GO:0019442]; tryptophan catabolic process to kynurenine [GO:0019441]	1	NA
one-carbon metabolic process [GO:0006730]	1	1
one-carbon metabolic process [GO:0006730]; S-adenosylmethionine cycle [GO:0033353]	1	1
organonitrogen compound catabolic process [GO:1901565]	1	1
peptide catabolic process [GO:0043171]; proteolysis [GO:0006508]	4	3
peptide cross-linking [GO:0018149]	2	2
peptide metabolic process [GO:0006518]	1	NA
peptide metabolic process [GO:0006518]; protein processing [GO:0016485]	2	NA
peptide metabolic process [GO:0006518]; proteolysis [GO:0006508]	1	1
peptidyl-arginine methylation [GO:0018216]	2	NA
peptidyl-glutamine methylation [GO:0018364]; rRNA (guanine-N7)-methylation [GO:0070476]; tRNA methylation [GO:0030488]	1	NA
peptidyl-lysine hydroxylation [GO:0017185]	1	NA
phenylalanyl-tRNA aminoacylation [GO:0006432]	1	NA
phosphocreatine biosynthetic process [GO:0046314]; phosphorylation [GO:0016310]	1	1
phosphorylation [GO:0016310]	2	NA
phosphorylation [GO:0016310]; pyridoxal 5’-phosphate salvage [GO:0009443]	1	NA
phosphorylation [GO:0016310]; selenocysteine biosynthetic process [GO:0016260]	1	1
plasma membrane phospholipid scrambling [GO:0017121]	1	1
pointed-end actin filament capping [GO:0051694]	1	1
polyamine biosynthetic process [GO:0006596]; spermidine biosynthetic process [GO:0008295]	1	NA
positive regulation of apoptotic signaling pathway [GO:2001235]; translation [GO:0006412]	1	1
positive regulation of DNA-templated transcription [GO:0045893]	1	1
positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]	1	NA
positive regulation of early endosome to late endosome transport [GO:2000643]; positive regulation of protein localization to early endosome [GO:1902966]; regulation of cell shape [GO:0008360]; regulation of organelle assembly [GO:1902115]	1	1
positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136]	1	NA
positive regulation of protein phosphorylation [GO:0001934]; rescue of stalled ribosome [GO:0072344]	1	1
positive regulation of protein ubiquitination [GO:0031398]; SCF-dependent proteasomal ubiquitin-dependent protein catabolic process [GO:0031146]	1	1
positive regulation of RNA polymerase II transcription preinitiation complex assembly [GO:0045899]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
positive regulation of translation [GO:0045727]	1	NA
positive regulation of translational elongation [GO:0045901]; positive regulation of translational termination [GO:0045905]	1	1
positive regulation of voltage-gated potassium channel activity [GO:1903818]; regulation of circadian sleep/wake cycle, sleep [GO:0045187]; regulation of synaptic transmission, cholinergic [GO:0032222]; rhythmic process [GO:0048511]; sleep [GO:0030431]	1	3
positive regulation of Wnt signaling pathway [GO:0030177]	1	NA
post-translational protein modification [GO:0043687]; protein N-linked glycosylation via asparagine [GO:0018279]	1	1
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]	1	NA
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; protein insertion into ER membrane [GO:0045048]	1	NA
post-translational protein targeting to membrane, translocation [GO:0031204]; SRP-dependent cotranslational protein targeting to membrane, translocation [GO:0006616]	1	2
postreplication repair [GO:0006301]; protein K63-linked ubiquitination [GO:0070534]; protein polyubiquitination [GO:0000209]	2	2
proline catabolic process to glutamate [GO:0010133]	2	2
prolyl-tRNA aminoacylation [GO:0006433]	1	NA
prostaglandin metabolic process [GO:0006693]	3	NA
proteasomal protein catabolic process [GO:0010498]	5	3
proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	1	NA
proteasomal protein catabolic process [GO:0010498]; ubiquitin-dependent protein catabolic process [GO:0006511]	3	3
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]	10	9
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; regulation of proteasomal protein catabolic process [GO:0061136]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of metabolic process [GO:0019222]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of protein catabolic process [GO:0042176]	1	1
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]	1	NA
proteasome assembly [GO:0043248]	1	NA
protein deglycosylation [GO:0006517]	1	NA
protein deneddylation [GO:0000338]	2	NA
protein depalmitoylation [GO:0002084]	2	NA
protein depalmitoylation [GO:0002084]; receptor-mediated endocytosis [GO:0006898]	1	NA
protein dephosphorylation [GO:0006470]	2	1
protein dephosphorylation [GO:0006470]; signal transduction [GO:0007165]	1	1
protein deubiquitination [GO:0016579]; regulation of protein stability [GO:0031647]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein export from nucleus [GO:0006611]	1	NA
protein folding [GO:0006457]	10	5
protein folding [GO:0006457]; protein peptidyl-prolyl isomerization [GO:0000413]	3	1
protein folding [GO:0006457]; protein stabilization [GO:0050821]	1	NA
protein folding [GO:0006457]; response to endoplasmic reticulum stress [GO:0034976]	2	2
protein folding [GO:0006457]; ubiquitin-dependent ERAD pathway [GO:0030433]	2	3
protein folding in endoplasmic reticulum [GO:0034975]	1	NA
protein geranylgeranylation [GO:0018344]	1	NA
protein geranylgeranylation [GO:0018344]; protein prenylation [GO:0018342]	1	NA
protein glycosylation [GO:0006486]	1	1
protein import into mitochondrial matrix [GO:0030150]	2	5
protein import into nucleus [GO:0006606]	2	1
protein import into nucleus [GO:0006606]; ribosomal subunit export from nucleus [GO:0000054]	1	1
protein initiator methionine removal involved in protein maturation [GO:0035551]	1	NA
protein K48-linked deubiquitination [GO:0071108]	1	NA
protein localization [GO:0008104]; protein transport [GO:0015031]	1	NA
protein maturation [GO:0051604]	1	1
protein modification by small protein conjugation [GO:0032446]; protein neddylation [GO:0045116]	1	NA
protein modification by small protein conjugation [GO:0032446]; protein sumoylation [GO:0016925]	2	NA
protein N-linked glycosylation [GO:0006487]	2	2
protein N-linked glycosylation via asparagine [GO:0018279]	3	3
protein palmitoylation [GO:0018345]	1	1
protein phosphorylation [GO:0006468]	4	NA
protein phosphorylation [GO:0006468]; regulation of mitotic cell cycle [GO:0007346]	1	NA
protein phosphorylation [GO:0006468]; tRNA processing [GO:0008033]; tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]	1	NA
protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
protein processing [GO:0016485]	2	NA
protein processing involved in protein targeting to mitochondrion [GO:0006627]	1	1
protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]	1	NA
protein refolding [GO:0042026]; response to heat [GO:0009408]	3	3
protein secretion [GO:0009306]	1	NA
protein stabilization [GO:0050821]	1	NA
protein sumoylation [GO:0016925]	1	NA
protein targeting [GO:0006605]; protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	1	1
protein targeting to ER [GO:0045047]; signal peptide processing [GO:0006465]	1	2
protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	1	NA
protein targeting to membrane [GO:0006612]	1	1
protein transport [GO:0015031]	1	1
protein transport [GO:0015031]; small GTPase mediated signal transduction [GO:0007264]; vesicle-mediated transport [GO:0016192]	1	1
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]	1	NA
protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	NA
proteolysis [GO:0006508]	61	34
proteolysis [GO:0006508]; regulation of apoptotic process [GO:0042981]	1	NA
proteolysis involved in protein catabolic process [GO:0051603]	3	4
proteolysis involved in protein catabolic process [GO:0051603]; regulation of catalytic activity [GO:0050790]	4	4
proton motive force-driven ATP synthesis [GO:0015986]	6	8
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]	1	1
proton motive force-driven mitochondrial ATP synthesis [GO:0042776]; proton transmembrane transport [GO:1902600]	1	1
proton transmembrane transport [GO:1902600]	1	1
protoporphyrinogen IX biosynthetic process [GO:0006782]	1	NA
purine nucleobase metabolic process [GO:0006144]	1	NA
purine nucleobase metabolic process [GO:0006144]; purine nucleotide metabolic process [GO:0006163]	1	NA
purine ribonucleoside salvage [GO:0006166]	1	1
purine ribonucleotide catabolic process [GO:0009154]	1	NA
pyridoxal phosphate biosynthetic process [GO:0042823]; pyridoxine biosynthetic process [GO:0008615]	1	NA
pyrimidine nucleobase catabolic process [GO:0006208]	1	NA
Ras protein signal transduction [GO:0007265]	2	2
regulation of actin cytoskeleton organization [GO:0032956]	1	1
regulation of alternative mRNA splicing, via spliceosome [GO:0000381]	1	NA
regulation of cobalamin metabolic process [GO:0106064]	1	NA
regulation of DNA-templated transcription [GO:0006355]	2	1
regulation of gene expression [GO:0010468]	1	1
regulation of macromolecule metabolic process [GO:0060255]; regulation of nitrogen compound metabolic process [GO:0051171]; regulation of primary metabolic process [GO:0080090]	1	NA
regulation of mitotic cell cycle [GO:0007346]; signal transduction [GO:0007165]	1	1
regulation of muscle contraction [GO:0006937]; skeletal muscle contraction [GO:0003009]	3	3
regulation of protein catabolic process [GO:0042176]; ubiquitin-dependent protein catabolic process [GO:0006511]	1	1
regulation of protein phosphorylation [GO:0001932]	2	NA
regulation of signal transduction [GO:0009966]	1	1
regulation of transcription by RNA polymerase II [GO:0006357]	3	2
regulation of translation [GO:0006417]	1	NA
removal of superoxide radicals [GO:0019430]	1	1
respiratory electron transport chain [GO:0022904]	2	2
response to endoplasmic reticulum stress [GO:0034976]	1	1
response to hormone [GO:0009725]	1	1
response to oxidative stress [GO:0006979]	5	2
Rho protein signal transduction [GO:0007266]	1	1
ribonucleoprotein complex assembly [GO:0022618]; translation [GO:0006412]	1	1
ribosomal large subunit assembly [GO:0000027]; translation [GO:0006412]	2	2
ribosomal large subunit biogenesis [GO:0042273]; translation [GO:0006412]	1	1
ribosomal small subunit assembly [GO:0000028]; translation [GO:0006412]	2	2
ribosomal small subunit biogenesis [GO:0042274]; rRNA processing [GO:0006364]; translation [GO:0006412]	1	1
ribosomal small subunit biogenesis [GO:0042274]; translation [GO:0006412]	1	1
ribosomal subunit export from nucleus [GO:0000054]; translational initiation [GO:0006413]; translational termination [GO:0006415]	1	NA
ribosome biogenesis [GO:0042254]	2	2
ribosome biogenesis [GO:0042254]; translation [GO:0006412]	1	NA
RNA-mediated gene silencing [GO:0031047]	1	NA
RNA 3’-end processing [GO:0031123]	1	1
RNA metabolic process [GO:0016070]	1	NA
RNA phosphodiester bond hydrolysis, exonucleolytic [GO:0090503]	1	1
RNA splicing [GO:0008380]	1	NA
rRNA processing [GO:0006364]	1	NA
sarcosine catabolic process [GO:1901053]	1	1
sensory perception of smell [GO:0007608]	4	3
sensory perception of taste [GO:0050909]; signal transduction [GO:0007165]	1	NA
sequestering of actin monomers [GO:0042989]	1	1
seryl-tRNA aminoacylation [GO:0006434]	1	NA
signal transduction [GO:0007165]	4	1
small GTPase mediated signal transduction [GO:0007264]	2	NA
small molecule metabolic process [GO:0044281]	1	NA
snoRNA guided rRNA pseudouridine synthesis [GO:0000454]	1	NA
sorbitol catabolic process [GO:0006062]	1	1
spermine biosynthetic process [GO:0006597]	1	NA
spliceosomal snRNP assembly [GO:0000387]	3	NA
spliceosomal tri-snRNP complex assembly [GO:0000244]	1	NA
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]	1	NA
SREBP signaling pathway [GO:0032933]	1	NA
SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	2	2
steroid metabolic process [GO:0008202]	1	2
sterol transport [GO:0015918]	2	NA
succinyl-CoA metabolic process [GO:0006104]; tricarboxylic acid cycle [GO:0006099]	2	2
sulfation [GO:0051923]	2	2
tetrahydrobiopterin biosynthetic process [GO:0006729]	3	1
tetrahydrofolate interconversion [GO:0035999]	2	1
threonyl-tRNA aminoacylation [GO:0006435]	1	NA
thymine catabolic process [GO:0006210]; valine catabolic process [GO:0006574]	1	1
translation [GO:0006412]	35	29
translation [GO:0006412]; translational elongation [GO:0006414]	2	2
translational elongation [GO:0006414]	3	3
translational initiation [GO:0006413]	2	NA
transmembrane transport [GO:0055085]	1	7
trehalose biosynthetic process [GO:0005992]	1	1
trehalose catabolic process [GO:0005993]	1	NA
tricarboxylic acid cycle [GO:0006099]	4	3
tRNA aminoacylation [GO:0043039]; tyrosyl-tRNA aminoacylation [GO:0006437]	1	NA
tRNA modification [GO:0006400]; tRNA-guanine transglycosylation [GO:0101030]	1	1
tRNA processing [GO:0008033]	1	NA
tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]	2	NA
tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]	1	NA
tRNA wobble uridine modification [GO:0002098]	1	NA
tryptophan catabolic process to kynurenine [GO:0019441]	1	NA
tryptophanyl-tRNA aminoacylation [GO:0006436]	1	NA
tyrosine catabolic process [GO:0006572]	1	1
tyrosine metabolic process [GO:0006570]	1	1
tyrosyl-tRNA aminoacylation [GO:0006437]	1	NA
ubiquinone-6 biosynthetic process [GO:1901006]	1	1
ubiquitin-dependent ERAD pathway [GO:0030433]	1	1
ubiquitin-dependent protein catabolic process [GO:0006511]	5	1
UDP-N-acetylglucosamine biosynthetic process [GO:0006048]	3	NA
vacuolar acidification [GO:0007035]; vacuolar transport [GO:0007034]	1	1
valine catabolic process [GO:0006574]	1	1
valyl-tRNA aminoacylation [GO:0006438]	1	NA
very long-chain fatty acid biosynthetic process [GO:0042761]	1	1
vesicle-mediated transport [GO:0016192]	1	1
activation of store-operated calcium channel activity [GO:0032237]; cellular calcium ion homeostasis [GO:0006874]; store-operated calcium entry [GO:0002115]	NA	1
aerobic respiration [GO:0009060]	NA	1
apoptotic DNA fragmentation [GO:0006309]	NA	1
apoptotic process [GO:0006915]; mitochondrial respiratory chain complex assembly [GO:0033108]; programmed cell death [GO:0012501]	NA	1
bioluminescence [GO:0008218]; triglyceride homeostasis [GO:0070328]	NA	2
carbohydrate metabolic process [GO:0005975]; glucosylceramide catabolic process [GO:0006680]	NA	1
cell-cell adhesion [GO:0098609]	NA	1
cell adhesion mediated by integrin [GO:0033627]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]	NA	2
cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]	NA	1
cellular response to unfolded protein [GO:0034620]; chaperone cofactor-dependent protein refolding [GO:0051085]; protein refolding [GO:0042026]; tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]; vesicle-mediated transport [GO:0016192]	NA	1
chaperone cofactor-dependent protein refolding [GO:0051085]; negative regulation of transcription by RNA polymerase II [GO:0000122]	NA	1
chemical synaptic transmission [GO:0007268]; modulation of chemical synaptic transmission [GO:0050804]; neuron cell-cell adhesion [GO:0007158]; postsynaptic membrane assembly [GO:0097104]; presynaptic membrane assembly [GO:0097105]; synaptic vesicle endocytosis [GO:0048488]	NA	1
cleavage involved in rRNA processing [GO:0000469]; maturation of LSU-rRNA [GO:0000470]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]	NA	1
cytidine deamination [GO:0009972]	NA	1
dorsal/ventral pattern formation [GO:0009953]; protein processing [GO:0016485]	NA	1
early endosome to Golgi transport [GO:0034498]	NA	1
ecdysone biosynthetic process [GO:0006697]	NA	1
endocytosis [GO:0006897]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; signal transduction [GO:0007165]	NA	1
endoplasmic reticulum calcium ion homeostasis [GO:0032469]	NA	1
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]	NA	1
establishment of protein localization to organelle [GO:0072594]	NA	1
ether lipid biosynthetic process [GO:0008611]	NA	1
exocytosis [GO:0006887]; vesicle fusion [GO:0006906]	NA	1
extracellular matrix organization [GO:0030198]; negative regulation of metalloendopeptidase activity [GO:1904684]	NA	1
fatty acid metabolic process [GO:0006631]; glycerol-3-phosphate metabolic process [GO:0006072]; phospholipid biosynthetic process [GO:0008654]; triglyceride biosynthetic process [GO:0019432]	NA	1
glycerol catabolic process [GO:0019563]; glycerol metabolic process [GO:0006071]; glycerol-3-phosphate biosynthetic process [GO:0046167]; phosphorylation [GO:0016310]; triglyceride metabolic process [GO:0006641]	NA	2
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]	NA	1
heme transport [GO:0015886]; transmembrane transport [GO:0055085]	NA	1
histone acetylation [GO:0016573]; mitotic sister chromatid cohesion [GO:0007064]	NA	1
inner mitochondrial membrane organization [GO:0007007]	NA	1
integrin-mediated signaling pathway [GO:0007229]	NA	1
intracellular protein transport [GO:0006886]	NA	1
intracellular protein transport [GO:0006886]; melanosome organization [GO:0032438]; vesicle-mediated transport [GO:0016192]	NA	1
ion transport [GO:0006811]; phototransduction [GO:0007602]	NA	1
late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; vesicle budding from membrane [GO:0006900]	NA	1
lipid storage [GO:0019915]	NA	1
lipid storage [GO:0019915]; positive regulation of sequestering of triglyceride [GO:0010890]	NA	1
localization [GO:0051179]	NA	1
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; translation [GO:0006412]	NA	1
membrane protein proteolysis [GO:0033619]; signal peptide processing [GO:0006465]	NA	1
microtubule-based process [GO:0007017]	NA	1
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]; mitochondrial respirasome assembly [GO:0097250]; regulation of oxidative phosphorylation [GO:0002082]	NA	1
mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]; NADH dehydrogenase complex assembly [GO:0010257]; phospholipid biosynthetic process [GO:0008654]	NA	1
mitochondrial protein processing [GO:0034982]	NA	1
mitochondrial protein processing [GO:0034982]; mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]	NA	1
mitochondrial respirasome assembly [GO:0097250]	NA	1
mitochondrial respiratory chain complex III assembly [GO:0034551]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]	NA	1
mitochondrion organization [GO:0007005]; protein transport [GO:0015031]	NA	1
modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; translation [GO:0006412]	NA	1
monoacylglycerol catabolic process [GO:0052651]; phosphatidylserine catabolic process [GO:0006660]	NA	1
NADPH regeneration [GO:0006740]; proton transmembrane transport [GO:1902600]	NA	1
negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]	NA	1
negative regulation of apoptotic process [GO:0043066]	NA	1
neuropeptide signaling pathway [GO:0007218]	NA	1
Notch receptor processing [GO:0007220]; protein processing [GO:0016485]	NA	1
phosphatidylethanolamine biosynthetic process [GO:0006646]; protein autoprocessing [GO:0016540]	NA	1
phosphatidylinositol dephosphorylation [GO:0046856]	NA	2
positive regulation of cell junction assembly [GO:1901890]; positive regulation of cell-cell adhesion mediated by cadherin [GO:2000049]; positive regulation of endocytosis [GO:0045807]; protein kinase C signaling [GO:0070528]; protein localization to plasma membrane [GO:0072659]; regulation of receptor internalization [GO:0002090]	NA	1
positive regulation of mitochondrial translation [GO:0070131]	NA	1
positive regulation of Ras protein signal transduction [GO:0046579]; signal transduction [GO:0007165]	NA	1
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]	NA	1
prostaglandin biosynthetic process [GO:0001516]	NA	1
protein export from nucleus [GO:0006611]; ribosomal large subunit export from nucleus [GO:0000055]; ribosomal small subunit export from nucleus [GO:0000056]	NA	1
protein folding [GO:0006457]; protein maturation [GO:0051604]	NA	1
protein localization [GO:0008104]	NA	1
protein localization to plasma membrane [GO:0072659]; regulation of myoblast differentiation [GO:0045661]	NA	1
protein targeting to ER [GO:0045047]	NA	1
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]	NA	1
regulation of muscle contraction [GO:0006937]; regulation of potassium ion transport [GO:0043266]	NA	1
response to cold [GO:0009409]	NA	1
retinal metabolic process [GO:0042574]	NA	1
SCF complex assembly [GO:0010265]	NA	1
unsaturated fatty acid biosynthetic process [GO:0006636]	NA	1
vacuolar acidification [GO:0007035]	NA	1

kable(BP[is.na(BP[,3])==TRUE,1])

x
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]
‘de novo’ GDP-L-fucose biosynthetic process [GO:0042351]; GDP-mannose metabolic process [GO:0019673]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; citrulline biosynthetic process [GO:0019240]; glutamine metabolic process [GO:0006541]; nitrogen compound metabolic process [GO:0006807]; UTP biosynthetic process [GO:0006228]
‘de novo’ pyrimidine nucleobase biosynthetic process [GO:0006207]; ‘de novo’ UMP biosynthetic process [GO:0044205]; pyrimidine nucleobase biosynthetic process [GO:0019856]; UMP biosynthetic process [GO:0006222]
[2Fe-2S] cluster assembly [GO:0044571]; iron-sulfur cluster assembly [GO:0016226]
3-keto-sphinganine metabolic process [GO:0006666]; sphingolipid biosynthetic process [GO:0030148]
5-phosphoribose 1-diphosphate biosynthetic process [GO:0006015]; purine nucleotide biosynthetic process [GO:0006164]
acetyl-CoA biosynthetic process [GO:0006085]; acetyl-CoA biosynthetic process from acetate [GO:0019427]; bioluminescence [GO:0008218]
acetyl-CoA metabolic process [GO:0006084]; farnesyl diphosphate biosynthetic process, mevalonate pathway [GO:0010142]; sterol biosynthetic process [GO:0016126]
actin filament bundle assembly [GO:0051017]; cell migration [GO:0016477]; establishment or maintenance of cell polarity [GO:0007163]
actin filament debranching [GO:0071846]; negative regulation of Arp2/3 complex-mediated actin nucleation [GO:0034316]; regulation of cellular component biogenesis [GO:0044087]
actin filament depolymerization [GO:0030042]; barbed-end actin filament capping [GO:0051016]; positive regulation of neuron projection development [GO:0010976]; regulation of lamellipodium assembly [GO:0010591]; sequestering of actin monomers [GO:0042989]
activation of GTPase activity [GO:0090630]; nucleocytoplasmic transport [GO:0006913]; signal transduction [GO:0007165]
acyl-CoA metabolic process [GO:0006637]
adenine salvage [GO:0006168]; AMP salvage [GO:0044209]; purine ribonucleoside salvage [GO:0006166]
adenosine catabolic process [GO:0006154]; inosine biosynthetic process [GO:0046103]
ADP biosynthetic process [GO:0006172]; AMP metabolic process [GO:0046033]; GTP metabolic process [GO:0046039]; ITP metabolic process [GO:0046041]; nucleoside triphosphate biosynthetic process [GO:0009142]; phosphorylation [GO:0016310]
alanyl-tRNA aminoacylation [GO:0006419]; tRNA modification [GO:0006400]
alternative mRNA splicing, via spliceosome [GO:0000380]; mRNA splicing, via spliceosome [GO:0000398]
amino acid metabolic process [GO:0006520]; catecholamine metabolic process [GO:0006584]; serotonin biosynthetic process [GO:0042427]
AMP biosynthetic process [GO:0006167]; ATP biosynthetic process [GO:0006754]
AMP catabolic process [GO:0006196]
AMP salvage [GO:0044209]; phosphorylation [GO:0016310]; purine nucleobase metabolic process [GO:0006144]; purine ribonucleoside salvage [GO:0006166]
anatomical structure development [GO:0048856]
animal organ morphogenesis [GO:0009887]; basement membrane assembly [GO:0070831]; cell migration [GO:0016477]; substrate adhesion-dependent cell spreading [GO:0034446]; system development [GO:0048731]; tissue development [GO:0009888]
animal organ morphogenesis [GO:0009887]; cell-cell adhesion via plasma-membrane adhesion molecules [GO:0098742]; cellular component organization [GO:0016043]; establishment of planar polarity [GO:0001736]; establishment or maintenance of cell polarity [GO:0007163]; homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]
anterograde axonal transport [GO:0008089]; protein transport [GO:0015031]; system development [GO:0048731]; vesicle-mediated transport [GO:0016192]
anterograde dendritic transport of neurotransmitter receptor complex [GO:0098971]; axon guidance [GO:0007411]; cytoskeleton-dependent intracellular transport [GO:0030705]; microtubule-based movement [GO:0007018]; synaptic vesicle transport [GO:0048489]
arginyl-tRNA aminoacylation [GO:0006420]
Arp2/3 complex-mediated actin nucleation [GO:0034314]
Arp2/3 complex-mediated actin nucleation [GO:0034314]; cell migration [GO:0016477]; regulation of actin filament polymerization [GO:0030833]
Arp2/3 complex-mediated actin nucleation [GO:0034314]; regulation of actin filament polymerization [GO:0030833]
asparagine biosynthetic process [GO:0006529]; glutamine metabolic process [GO:0006541]; L-asparagine biosynthetic process [GO:0070981]
aspartyl-tRNA aminoacylation [GO:0006422]
autophagosome assembly [GO:0000045]; autophagy of mitochondrion [GO:0000422]; cellular response to nitrogen starvation [GO:0006995]; macroautophagy [GO:0016236]
autophagosome assembly [GO:0000045]; Golgi organization [GO:0007030]; membrane fusion [GO:0061025]; nuclear membrane reassembly [GO:0031468]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
autophagy [GO:0006914]; response to starvation [GO:0042594]
bicoid mRNA localization [GO:0045450]
bioluminescence [GO:0008218]; fatty acid biosynthetic process [GO:0006633]
bioluminescence [GO:0008218]; fatty acid metabolic process [GO:0006631]
biosynthetic process [GO:0009058]; L-kynurenine catabolic process [GO:0097053]
butyrate catabolic process [GO:0046359]; fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]
calcineurin-mediated signaling [GO:0097720]; protein dephosphorylation [GO:0006470]
carbohydrate catabolic process [GO:0016052]; deoxyribonucleotide catabolic process [GO:0009264]; deoxyribose phosphate catabolic process [GO:0046386]
carbohydrate metabolic process [GO:0005975]; citrate metabolic process [GO:0006101]; proteolysis [GO:0006508]; tricarboxylic acid cycle [GO:0006099]
carbohydrate metabolic process [GO:0005975]; GDP-mannose biosynthetic process [GO:0009298]
carbohydrate metabolic process [GO:0005975]; glycoprotein catabolic process [GO:0006516]
carbohydrate metabolic process [GO:0005975]; innate immune response [GO:0045087]
carbohydrate metabolic process [GO:0005975]; N-acetylglucosamine catabolic process [GO:0006046]
carbohydrate metabolic process [GO:0005975]; pentose-phosphate shunt, oxidative branch [GO:0009051]
carbohydrate metabolic process [GO:0005975]; purine ribonucleoside salvage [GO:0006166]
carbohydrate phosphorylation [GO:0046835]; pentose metabolic process [GO:0019321]
carboxylic acid metabolic process [GO:0019752]
cell-cell adhesion [GO:0098609]; chemical synaptic transmission [GO:0007268]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]
cell-cell adhesion [GO:0098609]; establishment or maintenance of epithelial cell apical/basal polarity [GO:0045197]; neurotransmitter receptor transport postsynaptic membrane to endosome [GO:0098968]; neurotransmitter receptor transport, endosome to postsynaptic membrane [GO:0098887]; receptor clustering [GO:0043113]; receptor localization to synapse [GO:0097120]
cell death [GO:0008219]; proteolysis [GO:0006508]
cell development [GO:0048468]; cellular component organization [GO:0016043]; morphogenesis of an epithelium [GO:0002009]
cell differentiation [GO:0030154]; gamete generation [GO:0007276]
cell division [GO:0051301]; establishment of mitotic spindle orientation [GO:0000132]; microtubule sliding [GO:0051012]
cell surface receptor signaling pathway [GO:0007166]; cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]
cell volume homeostasis [GO:0006884]; chloride transport [GO:0006821]; mRNA cis splicing, via spliceosome [GO:0045292]; spliceosomal snRNP assembly [GO:0000387]
cell wall mannoprotein biosynthetic process [GO:0000032]; GDP-mannose biosynthetic process [GO:0009298]; protein glycosylation [GO:0006486]
cellular component organization [GO:0016043]; lipoprotein metabolic process [GO:0042157]
cellular response to DNA damage stimulus [GO:0006974]; peptidyl-glutamate ADP-deribosylation [GO:0140291]; purine nucleoside metabolic process [GO:0042278]
cellular response to stress [GO:0033554]; intracellular signal transduction [GO:0035556]; protein phosphorylation [GO:0006468]; response to external stimulus [GO:0009605]
CENP-A containing chromatin assembly [GO:0034080]; DNA replication-dependent chromatin assembly [GO:0006335]
ceramide biosynthetic process [GO:0046513]; sphingomyelin catabolic process [GO:0006685]
chaperone-mediated protein complex assembly [GO:0051131]; protein folding [GO:0006457]
chromosome segregation [GO:0007059]; protein maturation by [4Fe-4S] cluster transfer [GO:0106035]
coenzyme A biosynthetic process [GO:0015937]
coenzyme A biosynthetic process [GO:0015937]; phosphorylation [GO:0016310]
COPII-coated vesicle budding [GO:0090114]; intracellular protein transport [GO:0006886]
COPII-coated vesicle budding [GO:0090114]; mRNA transport [GO:0051028]; positive regulation of TOR signaling [GO:0032008]; protein exit from endoplasmic reticulum [GO:0032527]; protein import into nucleus [GO:0006606]
COPII-coated vesicle cargo loading [GO:0090110]; endoplasmic reticulum organization [GO:0007029]; intracellular protein transport [GO:0006886]
COPII-coated vesicle cargo loading [GO:0090110]; intracellular protein transport [GO:0006886]
cysteine biosynthetic process [GO:0019344]; cysteine biosynthetic process from serine [GO:0006535]; cysteine biosynthetic process via cystathionine [GO:0019343]
cysteine biosynthetic process via cystathionine [GO:0019343]; transsulfuration [GO:0019346]
cytoskeleton-dependent cytokinesis [GO:0061640]
cytoskeleton organization [GO:0007010]; phosphorylation [GO:0016310]; plasma membrane tubulation [GO:0097320]; regulation of endocytosis [GO:0030100]
D-amino acid catabolic process [GO:0019478]
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; deadenylation-independent decapping of nuclear-transcribed mRNA [GO:0031087]; nuclear-transcribed mRNA catabolic process, nonsense-mediated decay [GO:0000184]; positive regulation of catalytic activity [GO:0043085]
deadenylation-dependent decapping of nuclear-transcribed mRNA [GO:0000290]; mRNA processing [GO:0006397]
defense response [GO:0006952]; receptor signaling pathway via JAK-STAT [GO:0007259]; regulation of cell population proliferation [GO:0042127]; regulation of transcription by RNA polymerase II [GO:0006357]
deoxyribonucleoside triphosphate catabolic process [GO:0009204]; nucleoside triphosphate catabolic process [GO:0009143]; nucleotide metabolic process [GO:0009117]
dephosphorylation of RNA polymerase II C-terminal domain [GO:0070940]; mRNA polyadenylation [GO:0006378]; termination of RNA polymerase II transcription [GO:0006369]
detection of chemical stimulus involved in sensory perception of smell [GO:0050911]
dihydrofolate metabolic process [GO:0046452]; folic acid metabolic process [GO:0046655]; glycine biosynthetic process [GO:0006545]; one-carbon metabolic process [GO:0006730]; tetrahydrofolate biosynthetic process [GO:0046654]
DNA repair [GO:0006281]; mRNA splicing, via spliceosome [GO:0000398]; protein K63-linked ubiquitination [GO:0070534]
DNA unwinding involved in DNA replication [GO:0006268]; double-strand break repair via homologous recombination [GO:0000724]; meiotic cell cycle [GO:0051321]; nucleotide-excision repair [GO:0006289]; telomere maintenance via telomerase [GO:0007004]
dopaminergic neuron differentiation [GO:0071542]; neuron projection development [GO:0031175]
double-strand break repair via homologous recombination [GO:0000724]
dTMP biosynthetic process [GO:0006231]; dUMP biosynthetic process [GO:0006226]
endocytic recycling [GO:0032456]; vesicle-mediated transport [GO:0016192]
endocytosis [GO:0006897]; endosomal transport [GO:0016197]; plasma membrane tubulation [GO:0097320]
endocytosis [GO:0006897]; vesicle-mediated transport [GO:0016192]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein retention in ER lumen [GO:0006621]; protein transport [GO:0015031]
ER-associated misfolded protein catabolic process [GO:0071712]; ubiquitin-dependent ERAD pathway [GO:0030433]
error-free translesion synthesis [GO:0070987]
establishment of mitotic spindle localization [GO:0040001]; microtubule cytoskeleton organization [GO:0000226]; mitotic spindle assembly [GO:0090307]
establishment of synaptic specificity at neuromuscular junction [GO:0007529]; gamma-aminobutyric acid receptor clustering [GO:0097112]; glycine receptor clustering [GO:0072579]; Mo-molybdopterin cofactor biosynthetic process [GO:0006777]; molybdenum incorporation into molybdenum-molybdopterin complex [GO:0018315]; molybdopterin cofactor biosynthetic process [GO:0032324]; postsynaptic neurotransmitter receptor diffusion trapping [GO:0098970]
exonucleolytic catabolism of deadenylated mRNA [GO:0043928]
farnesyl diphosphate biosynthetic process [GO:0045337]; pheromone biosynthetic process [GO:0042811]
fatty acid beta-oxidation using acyl-CoA dehydrogenase [GO:0033539]; medium-chain fatty acid catabolic process [GO:0051793]
fatty acid elongation, monounsaturated fatty acid [GO:0034625]; fatty acid elongation, polyunsaturated fatty acid [GO:0034626]; fatty acid elongation, saturated fatty acid [GO:0019367]; sphingolipid biosynthetic process [GO:0030148]; very long-chain fatty acid biosynthetic process [GO:0042761]
FMN biosynthetic process [GO:0009398]; phosphorylation [GO:0016310]; riboflavin biosynthetic process [GO:0009231]; riboflavin metabolic process [GO:0006771]
formation of cytoplasmic translation initiation complex [GO:0001732]
formation of cytoplasmic translation initiation complex [GO:0001732]; formation of translation preinitiation complex [GO:0001731]
formation of translation preinitiation complex [GO:0001731]
fructose 2,6-bisphosphate metabolic process [GO:0006003]; fructose metabolic process [GO:0006000]
galactose catabolic process via UDP-galactose [GO:0033499]; glucose metabolic process [GO:0006006]
gamma-aminobutyric acid biosynthetic process [GO:0009449]
GDP-mannose biosynthetic process [GO:0009298]; mannose metabolic process [GO:0006013]; protein N-linked glycosylation [GO:0006487]
gluconeogenesis [GO:0006094]
glucose metabolic process [GO:0006006]; xylulose metabolic process [GO:0005997]
glucuronoside catabolic process [GO:0019391]
glutathione biosynthetic process [GO:0006750]; positive regulation of glutamate-cysteine ligase activity [GO:0035229]
glycerol metabolic process [GO:0006071]; phosphorylation [GO:0016310]
glycine biosynthetic process, by transamination of glyoxylate [GO:0019265]
glycolate biosynthetic process [GO:0046295]; glyoxal metabolic process [GO:1903189]; negative regulation of neuron death [GO:1901215]; response to oxidative stress [GO:0006979]
glycosaminoglycan biosynthetic process [GO:0006024]
glycosaminoglycan catabolic process [GO:0006027]; heparan sulfate proteoglycan catabolic process [GO:0030200]
glycyl-tRNA aminoacylation [GO:0006426]
Golgi organization [GO:0007030]; protein secretion [GO:0009306]
guanine catabolic process [GO:0006147]; guanine metabolic process [GO:0046098]
heme biosynthetic process [GO:0006783]
heme biosynthetic process [GO:0006783]; peptidyl-pyrromethane cofactor linkage [GO:0018160]; protoporphyrinogen IX biosynthetic process [GO:0006782]
heme biosynthetic process [GO:0006783]; protoporphyrinogen IX biosynthetic process [GO:0006782]
histidyl-tRNA aminoacylation [GO:0006427]; mitochondrial translation [GO:0032543]
histone H4 acetylation [GO:0043967]; nervous system development [GO:0007399]; regulation of transcription by RNA polymerase II [GO:0006357]
homophilic cell adhesion via plasma membrane adhesion molecules [GO:0007156]; positive regulation of synapse assembly [GO:0051965]; positive regulation of synaptic transmission [GO:0050806]
immune response [GO:0006955]
immune response [GO:0006955]; proteolysis involved in protein catabolic process [GO:0051603]
innate immune response [GO:0045087]; peptidoglycan catabolic process [GO:0009253]
inner mitochondrial membrane organization [GO:0007007]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]
inositol biosynthetic process [GO:0006021]; phospholipid biosynthetic process [GO:0008654]
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol dephosphorylation [GO:0046856]; positive regulation of flagellated sperm motility [GO:1902093]
inositol phosphate dephosphorylation [GO:0046855]; phosphatidylinositol phosphate biosynthetic process [GO:0046854]
intracellular protein transport [GO:0006886]; lipid droplet organization [GO:0034389]
intracellular protein transport [GO:0006886]; Rab protein signal transduction [GO:0032482]
intracellular protein transport [GO:0006886]; retrograde transport, endosome to Golgi [GO:0042147]
intracellular protein transport [GO:0006886]; vesicle docking [GO:0048278]; vesicle fusion [GO:0006906]
intracellular sequestering of iron ion [GO:0006880]; iron ion transport [GO:0006826]
iron-sulfur cluster assembly [GO:0016226]
isoleucyl-tRNA aminoacylation [GO:0006428]
isoprenoid biosynthetic process [GO:0008299]; pheromone biosynthetic process [GO:0042811]
ketone body biosynthetic process [GO:0046951]; leucine catabolic process [GO:0006552]
L-methionine salvage from methylthioadenosine [GO:0019509]
L-methionine salvage from methylthioadenosine [GO:0019509]; purine ribonucleoside salvage [GO:0006166]
L-phenylalanine catabolic process [GO:0006559]; tyrosine metabolic process [GO:0006570]
leucine catabolic process [GO:0006552]
lipid metabolic process [GO:0006629]; response to reactive oxygen species [GO:0000302]
lipoate biosynthetic process [GO:0009107]; protein lipoylation [GO:0009249]
localization [GO:0051179]; response to external stimulus [GO:0009605]; signal transduction [GO:0007165]
lysyl-tRNA aminoacylation [GO:0006430]
MAPK cascade [GO:0000165]; protein phosphorylation [GO:0006468]; stress-activated MAPK cascade [GO:0051403]
metabolite repair [GO:0110051]; nicotinamide nucleotide metabolic process [GO:0046496]
methionyl-tRNA aminoacylation [GO:0006431]
mitochondrial RNA processing [GO:0000963]; regulation of mitochondrial mRNA stability [GO:0044528]
mitochondrial translation [GO:0032543]
mitochondrial translational elongation [GO:0070125]
mitochondrial translational elongation [GO:0070125]; RNA processing [GO:0006396]
mitochondrial translational termination [GO:0070126]
mitochondrial tRNA 3’-end processing [GO:1990180]; tRNA 3’-terminal CCA addition [GO:0001680]; tRNA processing [GO:0008033]
mitochondrion organization [GO:0007005]; regulation of mRNA processing [GO:0050684]
mitotic spindle organization [GO:0007052]
mRNA export from nucleus [GO:0006406]
mRNA polyadenylation [GO:0006378]; mRNA processing [GO:0006397]
mRNA processing [GO:0006397]; mRNA transport [GO:0051028]; RNA splicing [GO:0008380]
mRNA splice site selection [GO:0006376]
mRNA splicing, via spliceosome [GO:0000398]
mRNA splicing, via spliceosome [GO:0000398]; P-body assembly [GO:0033962]
mRNA transport [GO:0051028]; nucleocytoplasmic transport [GO:0006913]; protein import into nucleus [GO:0006606]
mRNA transport [GO:0051028]; regulation of translation [GO:0006417]
N-acetylneuraminate catabolic process [GO:0019262]
N-terminal peptidyl-glycine N-myristoylation [GO:0018008]
N-terminal peptidyl-methionine acetylation [GO:0017196]
negative regulation of phosphoprotein phosphatase activity [GO:0032515]
negative regulation of translation [GO:0017148]; P-body assembly [GO:0033962]; stress granule assembly [GO:0034063]
neuron projection morphogenesis [GO:0048812]; positive regulation of axon extension [GO:0045773]; positive regulation of dendritic spine morphogenesis [GO:0061003]; postsynaptic actin cytoskeleton organization [GO:0098974]; regulation of actin filament polymerization [GO:0030833]
NLS-bearing protein import into nucleus [GO:0006607]
nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay [GO:0000288]; translation [GO:0006412]
nuclear-transcribed mRNA catabolic process, exonucleolytic [GO:0000291]; positive regulation of nuclear-transcribed mRNA poly(A) tail shortening [GO:0060213]; positive regulation of translational initiation [GO:0045948]; transcription initiation at RNA polymerase II promoter [GO:0006367]
nucleobase-containing compound metabolic process [GO:0006139]; organonitrogen compound metabolic process [GO:1901564]
nucleocytoplasmic transport [GO:0006913]
nucleoside metabolic process [GO:0009116]
nucleoside phosphate metabolic process [GO:0006753]; ribose phosphate metabolic process [GO:0019693]
nucleotide metabolic process [GO:0009117]
ommochrome biosynthetic process [GO:0006727]; tryptophan catabolic process to acetyl-CoA [GO:0019442]; tryptophan catabolic process to kynurenine [GO:0019441]
peptide metabolic process [GO:0006518]
peptide metabolic process [GO:0006518]; protein processing [GO:0016485]
peptidyl-arginine methylation [GO:0018216]
peptidyl-glutamine methylation [GO:0018364]; rRNA (guanine-N7)-methylation [GO:0070476]; tRNA methylation [GO:0030488]
peptidyl-lysine hydroxylation [GO:0017185]
phenylalanyl-tRNA aminoacylation [GO:0006432]
phosphorylation [GO:0016310]
phosphorylation [GO:0016310]; pyridoxal 5’-phosphate salvage [GO:0009443]
polyamine biosynthetic process [GO:0006596]; spermidine biosynthetic process [GO:0008295]
positive regulation of DNA damage response, signal transduction by p53 class mediator [GO:0043517]
positive regulation of endopeptidase activity [GO:0010950]; regulation of G1/S transition of mitotic cell cycle [GO:2000045]; regulation of proteasomal protein catabolic process [GO:0061136]
positive regulation of translation [GO:0045727]
positive regulation of Wnt signaling pathway [GO:0030177]
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; protein insertion into ER membrane [GO:0045048]
prolyl-tRNA aminoacylation [GO:0006433]
prostaglandin metabolic process [GO:0006693]
proteasomal protein catabolic process [GO:0010498]; proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein deubiquitination [GO:0016579]; regulation of proteasomal protein catabolic process [GO:0061136]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein homooligomerization [GO:0051260]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; regulation of metabolic process [GO:0019222]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteasome-mediated ubiquitin-dependent protein catabolic process [GO:0043161]; ubiquitin recycling [GO:0010992]
proteasome assembly [GO:0043248]
protein deglycosylation [GO:0006517]
protein deneddylation [GO:0000338]
protein depalmitoylation [GO:0002084]
protein depalmitoylation [GO:0002084]; receptor-mediated endocytosis [GO:0006898]
protein deubiquitination [GO:0016579]; regulation of protein stability [GO:0031647]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein deubiquitination [GO:0016579]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein export from nucleus [GO:0006611]
protein folding [GO:0006457]; protein stabilization [GO:0050821]
protein folding in endoplasmic reticulum [GO:0034975]
protein geranylgeranylation [GO:0018344]
protein geranylgeranylation [GO:0018344]; protein prenylation [GO:0018342]
protein initiator methionine removal involved in protein maturation [GO:0035551]
protein K48-linked deubiquitination [GO:0071108]
protein localization [GO:0008104]; protein transport [GO:0015031]
protein modification by small protein conjugation [GO:0032446]; protein neddylation [GO:0045116]
protein modification by small protein conjugation [GO:0032446]; protein sumoylation [GO:0016925]
protein phosphorylation [GO:0006468]
protein phosphorylation [GO:0006468]; regulation of mitotic cell cycle [GO:0007346]
protein phosphorylation [GO:0006468]; tRNA processing [GO:0008033]; tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]
protein polyubiquitination [GO:0000209]; ubiquitin-dependent protein catabolic process [GO:0006511]
protein processing [GO:0016485]
protein quality control for misfolded or incompletely synthesized proteins [GO:0006515]
protein secretion [GO:0009306]
protein stabilization [GO:0050821]
protein sumoylation [GO:0016925]
protein targeting to ER [GO:0045047]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway [GO:0043328]
protein ubiquitination [GO:0016567]; ubiquitin-dependent protein catabolic process [GO:0006511]
proteolysis [GO:0006508]; regulation of apoptotic process [GO:0042981]
protoporphyrinogen IX biosynthetic process [GO:0006782]
purine nucleobase metabolic process [GO:0006144]
purine nucleobase metabolic process [GO:0006144]; purine nucleotide metabolic process [GO:0006163]
purine ribonucleotide catabolic process [GO:0009154]
pyridoxal phosphate biosynthetic process [GO:0042823]; pyridoxine biosynthetic process [GO:0008615]
pyrimidine nucleobase catabolic process [GO:0006208]
regulation of alternative mRNA splicing, via spliceosome [GO:0000381]
regulation of cobalamin metabolic process [GO:0106064]
regulation of macromolecule metabolic process [GO:0060255]; regulation of nitrogen compound metabolic process [GO:0051171]; regulation of primary metabolic process [GO:0080090]
regulation of protein phosphorylation [GO:0001932]
regulation of translation [GO:0006417]
ribosomal subunit export from nucleus [GO:0000054]; translational initiation [GO:0006413]; translational termination [GO:0006415]
ribosome biogenesis [GO:0042254]; translation [GO:0006412]
RNA-mediated gene silencing [GO:0031047]
RNA metabolic process [GO:0016070]
RNA splicing [GO:0008380]
rRNA processing [GO:0006364]
sensory perception of taste [GO:0050909]; signal transduction [GO:0007165]
seryl-tRNA aminoacylation [GO:0006434]
small GTPase mediated signal transduction [GO:0007264]
small molecule metabolic process [GO:0044281]
snoRNA guided rRNA pseudouridine synthesis [GO:0000454]
spermine biosynthetic process [GO:0006597]
spliceosomal snRNP assembly [GO:0000387]
spliceosomal tri-snRNP complex assembly [GO:0000244]
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) [GO:0000388]
SREBP signaling pathway [GO:0032933]
sterol transport [GO:0015918]
threonyl-tRNA aminoacylation [GO:0006435]
translational initiation [GO:0006413]
trehalose catabolic process [GO:0005993]
tRNA aminoacylation [GO:0043039]; tyrosyl-tRNA aminoacylation [GO:0006437]
tRNA processing [GO:0008033]
tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]
tRNA threonylcarbamoyladenosine metabolic process [GO:0070525]
tRNA wobble uridine modification [GO:0002098]
tryptophan catabolic process to kynurenine [GO:0019441]
tryptophanyl-tRNA aminoacylation [GO:0006436]
tyrosyl-tRNA aminoacylation [GO:0006437]
UDP-N-acetylglucosamine biosynthetic process [GO:0006048]
valyl-tRNA aminoacylation [GO:0006438]

kable(BP[is.na(BP[,2])==TRUE,1])

x
activation of store-operated calcium channel activity [GO:0032237]; cellular calcium ion homeostasis [GO:0006874]; store-operated calcium entry [GO:0002115]
aerobic respiration [GO:0009060]
apoptotic DNA fragmentation [GO:0006309]
apoptotic process [GO:0006915]; mitochondrial respiratory chain complex assembly [GO:0033108]; programmed cell death [GO:0012501]
bioluminescence [GO:0008218]; triglyceride homeostasis [GO:0070328]
carbohydrate metabolic process [GO:0005975]; glucosylceramide catabolic process [GO:0006680]
cell-cell adhesion [GO:0098609]
cell adhesion mediated by integrin [GO:0033627]; cell-cell adhesion [GO:0098609]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]
cell adhesion mediated by integrin [GO:0033627]; cell migration [GO:0016477]; cell-matrix adhesion [GO:0007160]; heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules [GO:0007157]; integrin-mediated signaling pathway [GO:0007229]
cellular response to unfolded protein [GO:0034620]; chaperone cofactor-dependent protein refolding [GO:0051085]; protein refolding [GO:0042026]; tRNA splicing, via endonucleolytic cleavage and ligation [GO:0006388]; vesicle-mediated transport [GO:0016192]
chaperone cofactor-dependent protein refolding [GO:0051085]; negative regulation of transcription by RNA polymerase II [GO:0000122]
chemical synaptic transmission [GO:0007268]; modulation of chemical synaptic transmission [GO:0050804]; neuron cell-cell adhesion [GO:0007158]; postsynaptic membrane assembly [GO:0097104]; presynaptic membrane assembly [GO:0097105]; synaptic vesicle endocytosis [GO:0048488]
cleavage involved in rRNA processing [GO:0000469]; maturation of LSU-rRNA [GO:0000470]; rRNA pseudouridine synthesis [GO:0031118]; snRNA pseudouridine synthesis [GO:0031120]
cytidine deamination [GO:0009972]
dorsal/ventral pattern formation [GO:0009953]; protein processing [GO:0016485]
early endosome to Golgi transport [GO:0034498]
ecdysone biosynthetic process [GO:0006697]
endocytosis [GO:0006897]; peptidyl-serine phosphorylation [GO:0018105]; positive regulation of canonical Wnt signaling pathway [GO:0090263]; positive regulation of proteasomal ubiquitin-dependent protein catabolic process [GO:0032436]; signal transduction [GO:0007165]
endoplasmic reticulum calcium ion homeostasis [GO:0032469]
endoplasmic reticulum to Golgi vesicle-mediated transport [GO:0006888]; protein transport [GO:0015031]
establishment of protein localization to organelle [GO:0072594]
ether lipid biosynthetic process [GO:0008611]
exocytosis [GO:0006887]; vesicle fusion [GO:0006906]
extracellular matrix organization [GO:0030198]; negative regulation of metalloendopeptidase activity [GO:1904684]
fatty acid metabolic process [GO:0006631]; glycerol-3-phosphate metabolic process [GO:0006072]; phospholipid biosynthetic process [GO:0008654]; triglyceride biosynthetic process [GO:0019432]
glycerol catabolic process [GO:0019563]; glycerol metabolic process [GO:0006071]; glycerol-3-phosphate biosynthetic process [GO:0046167]; phosphorylation [GO:0016310]; triglyceride metabolic process [GO:0006641]
heme biosynthetic process [GO:0006783]; negative regulation of ATP-dependent activity [GO:0032780]; regulation of DNA-templated transcription [GO:0006355]
heme transport [GO:0015886]; transmembrane transport [GO:0055085]
histone acetylation [GO:0016573]; mitotic sister chromatid cohesion [GO:0007064]
inner mitochondrial membrane organization [GO:0007007]
integrin-mediated signaling pathway [GO:0007229]
intracellular protein transport [GO:0006886]
intracellular protein transport [GO:0006886]; melanosome organization [GO:0032438]; vesicle-mediated transport [GO:0016192]
ion transport [GO:0006811]; phototransduction [GO:0007602]
late endosome to vacuole transport via multivesicular body sorting pathway [GO:0032511]; vesicle budding from membrane [GO:0006900]
lipid storage [GO:0019915]
lipid storage [GO:0019915]; positive regulation of sequestering of triglyceride [GO:0010890]
localization [GO:0051179]
maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GO:0000463]; translation [GO:0006412]
membrane protein proteolysis [GO:0033619]; signal peptide processing [GO:0006465]
microtubule-based process [GO:0007017]
mitochondrial electron transport, cytochrome c to oxygen [GO:0006123]; mitochondrial respirasome assembly [GO:0097250]; regulation of oxidative phosphorylation [GO:0002082]
mitochondrial electron transport, NADH to ubiquinone [GO:0006120]; mitochondrial respiratory chain complex I assembly [GO:0032981]; NADH dehydrogenase complex assembly [GO:0010257]; phospholipid biosynthetic process [GO:0008654]
mitochondrial protein processing [GO:0034982]
mitochondrial protein processing [GO:0034982]; mitochondrial proton-transporting ATP synthase complex assembly [GO:0033615]
mitochondrial respirasome assembly [GO:0097250]
mitochondrial respiratory chain complex III assembly [GO:0034551]; protein insertion into mitochondrial inner membrane from matrix [GO:0032979]
mitochondrion organization [GO:0007005]; protein transport [GO:0015031]
modification-dependent protein catabolic process [GO:0019941]; protein ubiquitination [GO:0016567]; translation [GO:0006412]
monoacylglycerol catabolic process [GO:0052651]; phosphatidylserine catabolic process [GO:0006660]
NADPH regeneration [GO:0006740]; proton transmembrane transport [GO:1902600]
negative regulation of amyloid precursor protein biosynthetic process [GO:0042985]
negative regulation of apoptotic process [GO:0043066]
neuropeptide signaling pathway [GO:0007218]
Notch receptor processing [GO:0007220]; protein processing [GO:0016485]
phosphatidylethanolamine biosynthetic process [GO:0006646]; protein autoprocessing [GO:0016540]
phosphatidylinositol dephosphorylation [GO:0046856]
positive regulation of cell junction assembly [GO:1901890]; positive regulation of cell-cell adhesion mediated by cadherin [GO:2000049]; positive regulation of endocytosis [GO:0045807]; protein kinase C signaling [GO:0070528]; protein localization to plasma membrane [GO:0072659]; regulation of receptor internalization [GO:0002090]
positive regulation of mitochondrial translation [GO:0070131]
positive regulation of Ras protein signal transduction [GO:0046579]; signal transduction [GO:0007165]
post-translational protein targeting to endoplasmic reticulum membrane [GO:0006620]; SRP-dependent cotranslational protein targeting to membrane [GO:0006614]
prostaglandin biosynthetic process [GO:0001516]
protein export from nucleus [GO:0006611]; ribosomal large subunit export from nucleus [GO:0000055]; ribosomal small subunit export from nucleus [GO:0000056]
protein folding [GO:0006457]; protein maturation [GO:0051604]
protein localization [GO:0008104]
protein localization to plasma membrane [GO:0072659]; regulation of myoblast differentiation [GO:0045661]
protein targeting to ER [GO:0045047]
regulation of chromosome organization [GO:0033044]; regulation of transcription by RNA polymerase II [GO:0006357]
regulation of muscle contraction [GO:0006937]; regulation of potassium ion transport [GO:0043266]
response to cold [GO:0009409]
retinal metabolic process [GO:0042574]
SCF complex assembly [GO:0010265]
unsaturated fatty acid biosynthetic process [GO:0006636]
vacuolar acidification [GO:0007035]

tmp <- c(sum(complete.cases(BP[,-1])),
                  sum(is.na(BP[,3])),
                  sum(is.na(BP[,2])))
results_comp_bp <- c(results_comp_bp, tmp/(length(BP[,1])))
name_comp_bp <- c(name_comp_bp,"graph3C-pool+fracD2","graph3C-onlyFracD2","graph3C-onlyPoolD2")

6 Grafik 4

• nicht notwendig

7 Results comparison

#print(results_comp)
#print(length_comp)
#print(name_comp)
#results_comp/length_comp*100
name_comp_v002 <- c("D1 to D2",
                    "2D to 3D",
                    "D1 frac to D1 pool",
                    "D2 frac to D2 pool")
df <- as.data.frame(cbind(name_comp_v002,
                          round(results_comp*100,1),
                          round(results_comp_cc*100,1),
                          round(results_comp_bp*100,1)))
colnames(df) <- c("Name","Result molecular function", "Result Cellular compartment")

kable(df)

Name	Result molecular function	Result Cellular compartment	NA
D1 to D2	47	50.2	46.4
2D to 3D	32.6	23.3	29.6
D1 frac to D1 pool	20.4	26.5	24
D2 frac to D2 pool	77.1	77.1	77.1
D1 to D2	6.2	6.2	6.2
2D to 3D	16.6	16.6	16.6
D1 frac to D1 pool	50.6	45.7	47
D2 frac to D2 pool	47.9	51.2	51.7
D1 to D2	1.5	3.1	1.3
2D to 3D	54.4	55.1	53.5
D1 frac to D1 pool	37.4	31.9	36.9
D2 frac to D2 pool	8.2	13	9.6

kable(t(df))

Name	D1 to D2	2D to 3D	D1 frac to D1 pool	D2 frac to D2 pool	D1 to D2	2D to 3D	D1 frac to D1 pool	D2 frac to D2 pool	D1 to D2	2D to 3D	D1 frac to D1 pool	D2 frac to D2 pool
Result molecular function	47	32.6	20.4	77.1	6.2	16.6	50.6	47.9	1.5	54.4	37.4	8.2
Result Cellular compartment	50.2	23.3	26.5	77.1	6.2	16.6	45.7	51.2	3.1	55.1	31.9	13
NA	46.4	29.6	24	77.1	6.2	16.6	47	51.7	1.3	53.5	36.9	9.6

tmp <- c(rep("2A",3),
  rep("2C",3),
  rep("3B",3),
  rep("3C",3))
df <- data.frame(
  Category = rep(tmp, times = 3),
  Type = c(rep(c("bp", "mf", "cc"), each = 12)),
  Percentage = c(round(results_comp_bp*100,1),
                 round(results_comp*100,1),
                 round(results_comp_cc*100,1)),
  Variable = rep(c("D1+D2", "D1", "D2",
               "2D+3D", "2D", "3D",
               "D1frac+pool", "D1 frac", "D1 pool",
               "D2frac+pool", "D2 frac", "D2 pool"),3)
)

df_2 <- data.frame(
  Category = rep(tmp, times = 3),
  Type = c(rep(c("biological process", "molecular funciton", "cellular compartment"), each = 12)),
  Percentage = c(round(results_comp_bp*100,1),
                 round(results_comp*100,1),
                 round(results_comp_cc*100,1)),
  Variable = rep(c("D1+D2", "D1", "D2",
                   "2D+3D", "2D", "3D",
                   "D1frac+pool", "D1 frac", "D1",
                   "D2frac+pool", "D2 frac", "D2"),3)
)
# Create the stacked bar plot with smaller text labels
ggplot(df_2, aes(x = Category, y = Percentage, fill = Variable)) +
  geom_bar(stat = "identity", position = "stack") +
  geom_text(aes(label = paste0(Percentage, "%")), position = position_stack(vjust = 0.5), size = 3) +  # Adjust the size here
  facet_grid(Type ~ ., scales = "free_y", space = "free_y") +
  theme_minimal() +
  labs(x = "Category",
       y = "Percentage",
       fill = "Legend")

# Create the stacked bar plot with smaller text labels and the legend at the bottom
ggplot(df_2, aes(x = Category, y = Percentage, fill = Variable)) +
  geom_bar(stat = "identity", position = "stack") +
  geom_text(aes(label = paste0(Percentage, "%")), position = position_stack(vjust = 0.5), size = 3) +
  facet_wrap(~ Type, scales = "free", nrow = 1) +  # All plots in one row
  theme_minimal() +
  labs(x = "Category",
       y = "Percentage",
       fill = "Variable") +
  theme(legend.position = "bottom", legend.box = "horizontal")